Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq28 592 2e-164 seq4 583 1e-161 seq5 547 8e-151 seq1 453 1e-122 seq3 315 8e-81 >seq28 Length=135199 Score = 592 bits (656), Expect = 2e-164 Identities = 724/985 (74%), Gaps = 2/985 (0%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| || || |||||||||||||| |||||||||||||| Sbjct 126 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 185 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| || ||| ||||| || | | Sbjct 186 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 245 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || |||||||| || || || ||||| || |||| ||| | ||||| ||| Sbjct 246 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 305 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||||||||| ||||| | ||||||| |||||||| Sbjct 306 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 365 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || |||||||| |||||||||||||| Sbjct 366 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 425 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || |||||||| || |||||||| | || || ||||||| |||||||| | | Sbjct 426 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 485 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | ||||||||||| ||| |||||| | || ||||| ||| Sbjct 486 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAACA 545 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||||||||| || || |||||||| ||| Sbjct 546 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCTGGAATACA 605 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | ||| ||||||| || || || || || | ||||| ||||||||||| ||||| Sbjct 606 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGA 665 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | ||| || | | ||| ||||||| || |||||||| ||||| || || |||||| Sbjct 666 CCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACA 725 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| || |||||||| | ||| | ||||||||| ||||||||||| ||| | Sbjct 726 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 785 Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692 | |||||| | |||||| | |||| || | |||||| |||||||| |||| |||| Sbjct 786 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 845 Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752 || || | ||| ||||||||||| || || || || | || || || ||| | Sbjct 846 TCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTA 905 Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812 |||| | |||||||| || || |||||||| || | | |||||||| || ||||| Sbjct 906 GGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCG 965 Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871 || ||||| |||||||| ||||| || || | | ||| || || || || ||||| ||| Sbjct 966 CGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGA-AGT 1024 Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931 || | | || || || ||||| | | || ||||| || | || | ||| || | Sbjct 1025 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTC 1084 Query 84932 AGTGGAGGTGACCCAATCACAGAAG 84956 |||| || | ||| | |||||| Sbjct 1085 AGTGCTAGTTATCCAGTTGCAGAAG 1109 >seq4 Length=48772488 Score = 583 bits (646), Expect = 1e-161 Identities = 722/985 (73%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| || || |||||||||||||| |||||||||||||| Sbjct 22676632 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 22676573 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| || ||| ||||| || | | Sbjct 22676572 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 22676513 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || |||||||| || || || ||||| || |||| ||| | ||||| ||| Sbjct 22676512 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 22676453 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||||||||| ||||| | ||||||| |||||||| Sbjct 22676452 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 22676393 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || |||||||| |||||||||||||| Sbjct 22676392 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 22676333 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || |||||||| || |||||||| | || || ||||||| |||||||| | | Sbjct 22676332 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 22676273 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | ||||||||||| ||| |||||| | || || || ||| Sbjct 22676272 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCAAAAACA 22676213 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||||||||| || || |||||||| ||| Sbjct 22676212 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACA 22676153 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | ||| ||||||| || || || || || | ||||| ||||||||||| ||||| Sbjct 22676152 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGA 22676093 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | ||| || | | ||| ||||||| || |||||||| ||||| || || |||||| Sbjct 22676092 CCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACA 22676033 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| || |||||||| | ||| | ||||||||| ||||||||||| ||| | Sbjct 22676032 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 22675973 Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692 | |||||| | |||||| | |||| || | |||||| |||||||| |||| |||| Sbjct 22675972 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 22675913 Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752 || || | ||| ||||||||||| || || || || | || || || ||| | Sbjct 22675912 TCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCGCAGAAGTA 22675853 Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812 |||| | |||||||| || || |||||||| || | | |||||||| | ||||| Sbjct 22675852 GGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAATAGGCTCG 22675793 Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871 || ||||| |||||||| ||||| || || | | ||| || || || || ||||| ||| Sbjct 22675792 CGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGA-AGT 22675734 Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931 || | | || || || ||||| | | || ||||| || | || | ||| || | Sbjct 22675733 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTC 22675674 Query 84932 AGTGGAGGTGACCCAATCACAGAAG 84956 |||| || | ||| | |||||| Sbjct 22675673 AGTGCTAGTTATCCAGTTGCAGAAG 22675649 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 84124 CCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGA 84183 |||| || |||| ||| | | ||| ||||| || || || | |||||||||||||||| Sbjct 45406998 CCATAGTACTAATACCTAAATCAGTGAACCAGATTCCTACTGCAGGCCAAGCAGCCAAGA 45407057 Query 84184 AAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGT 84243 ||||||| | |||| || | |||||| |||||| |||||||| | || || || | Sbjct 45407058 AAAAGTGTAAAGAAGGAGAGTCGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAAT 45407117 Query 84244 AGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGT 84303 | |||||||| |||||||||||||| || || |||||||| || |||||||| | || Sbjct 45407118 AAATATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCGT 45407177 Query 84304 T 84304 | Sbjct 45407178 T 45407178 >seq5 Length=28563423 Score = 547 bits (606), Expect = 8e-151 Identities = 717/986 (73%), Gaps = 5/986 (1%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| || || |||||||||||||| |||||||||||||| Sbjct 14558567 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 14558626 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | |||||| ||| ||||| || | | Sbjct 14558627 GCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTACAGAT 14558686 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || |||||||| || || || |||| || |||| ||| | ||||| ||| Sbjct 14558687 TGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGTGAAC 14558746 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAAC-GACTATTGTTGAA 84211 || || || || || ||||||||||||||||| ||||| | ||||| || |||||||| Sbjct 14558747 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAGAGAGTTGTTGAA 14558806 Query 84212 GGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGT 84271 |||||| |||||||| | || || || || || ||||| || |||||||||||||| Sbjct 14558807 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTATAAGT 14558866 Query 84272 TTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCG 84331 || || |||||||| || |||||||| | || || ||||||| |||||||| | Sbjct 14558867 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 14558926 Query 84332 GATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATAC 84391 ||| | | ||| || || | ||||||||||| ||| |||||| | || ||||| || Sbjct 14558927 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAAC 14558986 Query 84392 ACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGAC 84451 |||||| || || ||||||||||| |||||||||||||||| || || |||||||| || Sbjct 14558987 ACCAGCTACACCTAACATGTGAAA-TGATGCATAAGGATGTTGTGCTCTGCCTGGAATAC 14559045 Query 84452 AAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTG 84511 || ||| |||| || || || || || || | ||||| ||||||||||| ||||| Sbjct 14559046 AATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTG 14559105 Query 84512 CCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAAC 84571 || | ||| || | | ||| ||||||| || |||||||| ||||| || || ||||| Sbjct 14559106 ACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAAC 14559165 Query 84572 ACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGC 84631 | ||||| || ||||||| | ||| | ||||||||| ||||||||||| ||| Sbjct 14559166 AACAATCCAAGGGTGCATACC-AAACGGAAACTAAGTTCCCACTCACGACCCATATAACA 14559224 Query 84632 AAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCA 84691 | | |||||| | |||||| | |||| || | |||||| |||||||| |||| || Sbjct 14559225 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAATCA 14559284 Query 84692 TTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGA 84751 ||| || | ||| ||||| ||||| || || || || | || || || ||| | Sbjct 14559285 TTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGT 14559344 Query 84752 TGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTC 84811 |||| | |||||||| || || |||||||| || | | |||||||| || ||||| Sbjct 14559345 AGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTC 14559404 Query 84812 ACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAG 84870 || ||||| |||||||| ||||| || || | | ||| || || || || ||||| || Sbjct 14559405 GCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGA-AG 14559463 Query 84871 TGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGT 84930 | || | | || || || ||||| | | || ||||| | | || | ||| || | Sbjct 14559464 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCTGATGTAAAGACGATTTT 14559523 Query 84931 TAGTGGAGGTGACCCAATCACAGAAG 84956 |||| || | ||| | |||||| Sbjct 14559524 CAGTGCTAGTTATCCAGTTGCAGAAG 14559549 >seq1 Length=75119905 Score = 453 bits (502), Expect = 1e-122 Identities = 572/783 (73%), Gaps = 2/783 (0%) Strand=Plus/Plus Query 84175 CAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGAC 84234 |||||||||| ||||| | ||||||| |||||||| |||||| |||||||| | | Sbjct 3928918 CAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATC 3928977 Query 84235 GACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGT 84294 | || || || || |||||||| |||||||||||||| || || |||||||| || |||| Sbjct 3928978 GGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGT 3929037 Query 84295 AACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTG 84354 |||| | || || ||||||| |||||||| | ||| | | ||| || || | | Sbjct 3929038 AACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGTTACCAAGG 3929097 Query 84355 AACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAA 84414 |||||||||| ||| |||||| | || ||||| |||||||| || || |||||||||| Sbjct 3929098 AACCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGTGAA 3929157 Query 84415 AGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTG 84474 | ||||||||||||||||| || || |||||||| |||| ||| ||||||| || || | Sbjct 3929158 ATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAG 3929217 Query 84475 AGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATA 84534 | || || | ||||| ||||||||||| ||||| || | ||| || | | ||| | Sbjct 3929218 ATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGAAAA 3929277 Query 84535 CAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGA 84594 |||||| || |||||||| ||||| || || |||||| ||||| || |||||||| | Sbjct 3929278 CAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCCA 3929337 Query 84595 GACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAA 84654 ||| | ||||||||| ||||||||||| ||| | | |||||| | |||||| | Sbjct 3929338 AACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTA 3929397 Query 84655 AGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCC 84714 |||| || | |||||| |||||||| |||| |||||| || | ||| ||||||| Sbjct 3929398 GAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTTCCC 3929457 Query 84715 AAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGA 84774 |||| || || || || | || || || ||| | |||| | |||||||| || | Sbjct 3929458 AAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGATAA 3929517 Query 84775 TGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTG 84834 | |||||||| || | | |||||||| || ||||| || ||||| |||||||| |||| Sbjct 3929518 TATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACTG 3929577 Query 84835 GGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATC 84893 | || || | | ||| || || || || ||| | ||| || | | || || || ||| Sbjct 3929578 GAGGGGCTGCGATGAAGGCGATAATAAATACA-AAAGTTGCGGTCAATAAGGTAGGGATC 3929636 Query 84894 ATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACCCAATCACAG 84953 || | | || ||||| || | || | ||| || | |||| || | ||| | ||| Sbjct 3929637 ATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTTATCCAGTTGCAG 3929696 Query 84954 AAG 84956 ||| Sbjct 3929697 AAG 3929699 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 84530 GAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCAT 84589 ||| ||| ||| |||||||||| ||||| || || |||||| ||||| |||||||| Sbjct 40130395 GAAAACAACAGTCGCCGCTGCAATAGGAGCTGAATATGCAACAGCAATCCAAGGACGCAT 40130336 Query 84590 ACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTA 84628 ||| ||||| | ||||||||| ||||||||||| || Sbjct 40130335 ACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 40130297 >seq3 Length=59935730 Score = 315 bits (348), Expect = 8e-81 Identities = 335/442 (76%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| || || |||||||||||||| |||||||||||||| Sbjct 16822136 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 16822077 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| || ||| ||||| || | | Sbjct 16822076 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 16822017 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || |||||||| || || || ||||| || |||| ||| | ||||| ||| Sbjct 16822016 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 16821957 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||||||||| ||||| | ||||||| |||||||| Sbjct 16821956 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 16821897 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || |||||||| |||||||||||||| Sbjct 16821896 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 16821837 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || |||||||| || |||||||| | || || ||||||| |||||||| | | Sbjct 16821836 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 16821777 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | ||||||||||| ||| |||||| | || ||||| ||| Sbjct 16821776 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAACA 16821717 Query 84393 CCAGCAACTCCCAACATGTGAA 84414 ||||| || || |||||||||| Sbjct 16821716 CCAGCTACACCTAACATGTGAA 16821695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571273400054240