Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq28 488 2e-133 seq4 479 8e-131 seq5 452 1e-122 seq1 378 2e-100 seq3 223 1e-53 >seq28 Length=135199 Score = 488 bits (540), Expect = 2e-133 Identities = 697/976 (71%), Gaps = 4/976 (0%) Strand=Plus/Minus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || ||||| || ||||| || | ||||||||||| || | ||||| || Sbjct 1099 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 1040 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| | ||| ||||| | |||||||||||||| || || ||||| Sbjct 1039 ACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGA 981 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATC 25989 ||| ||||| || || ||||| ||||| || || ||| | || ||||||||||| || || Sbjct 980 TATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTC 921 Query 25990 AGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC 26049 || || | | || | ||| ||||||||| | || |||||||| || |||||||| Sbjct 920 TGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGC 861 Query 26050 TGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTT 26109 || | | || || ||| |||||||||| || || ||| | || ||| | | ||||| Sbjct 860 TGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 801 Query 26110 CTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAAT 26169 |||| | || ||||| ||| || | |||||||||| || | | | || || Sbjct 800 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTAT 741 Query 26170 GAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTT 26229 | | || ||||| |||||||||| |||| || | | || || || || ||||| Sbjct 740 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTT 681 Query 26230 AGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTAC 26289 |||| ||| | || ||||| || || |||||| |||||| | || || |||||||| Sbjct 680 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 621 Query 26290 TTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATAT 26349 ||| ||||||||| | |||||||| || || || || || || ||||| ||||| || || Sbjct 620 TTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACAT 561 Query 26350 GGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGT 26409 | ||||| ||||| |||||||| || | || ||| ||||||||| || ||||| Sbjct 560 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 501 Query 26410 TACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTT 26469 || || | || ||||| || || | | || ||| | || || || || Sbjct 500 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 441 Query 26470 TGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAAT 26529 ||| ||||| |||||||| ||||||||||| ||||| || || || ||||| ||||||| Sbjct 440 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 381 Query 26530 TTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCC 26589 || || ||||| ||||| || ||| |||||| | || ||||| | ||| ||||||| Sbjct 380 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 321 Query 26590 GGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGG 26649 || || || || ||| | || || | ||||| | || ||||| || ||||||||||| Sbjct 320 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGG 261 Query 26650 TTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCTG 26708 || || || ||||| || ||||| ||| || || | | || || ||| ||||||| Sbjct 260 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTA-ATACTTGGGCTG 202 Query 26709 ATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACT 26768 || | | ||||| ||||| || || | ||||| |||||||| ||||||||||| |||| Sbjct 201 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 142 Query 26769 TTCCACTTGACTTAGC 26784 | || || || |||| Sbjct 141 TCCCTCTAGATCTAGC 126 >seq4 Length=48772488 Score = 479 bits (530), Expect = 8e-131 Identities = 695/976 (71%), Gaps = 4/976 (0%) Strand=Plus/Plus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || ||||| || ||||| || | ||||||||||| || | ||||| || Sbjct 22675659 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 22675718 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| | ||| ||||| | |||||||||||||| || || ||||| Sbjct 22675719 ACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGA 22675777 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATC 25989 ||| ||||| || || ||||| |||| || || ||| | || ||||||||||| || || Sbjct 22675778 TATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTC 22675837 Query 25990 AGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC 26049 || || | | || | ||| ||||||||| | || || ||||| || |||||||| Sbjct 22675838 TGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGC 22675897 Query 26050 TGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTT 26109 || | | || || ||| |||||||||| || || ||| | || ||| | | ||||| Sbjct 22675898 TGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 22675957 Query 26110 CTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAAT 26169 |||| | || ||||| ||| || | |||||||||| || | | | || || Sbjct 22675958 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTAT 22676017 Query 26170 GAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTT 26229 | | || ||||| |||||||||| |||| || | | || || || || ||||| Sbjct 22676018 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTT 22676077 Query 26230 AGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTAC 26289 |||| ||| | || ||||| || || |||||| |||||| | || || |||||||| Sbjct 22676078 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 22676137 Query 26290 TTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATAT 26349 ||| ||||||||| | |||||||| ||||| || || || || ||||| ||||| || || Sbjct 22676138 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 22676197 Query 26350 GGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGT 26409 | ||||| ||||| ||||| || || | || ||| ||||||||| || ||||| Sbjct 22676198 GTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 22676257 Query 26410 TACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTT 26469 || || | || ||||| || || | | || ||| | || || || || Sbjct 22676258 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 22676317 Query 26470 TGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAAT 26529 ||| ||||| |||||||| ||||||||||| ||||| || || || ||||| ||||||| Sbjct 22676318 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 22676377 Query 26530 TTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCC 26589 || || ||||| ||||| || ||| |||||| | || ||||| | ||| ||||||| Sbjct 22676378 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 22676437 Query 26590 GGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGG 26649 || || || || ||| | || || | ||||| | || ||||| || ||||||||||| Sbjct 22676438 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGG 22676497 Query 26650 TTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCTG 26708 || || || ||||| || ||||| ||| || || | | || || ||| ||||||| Sbjct 22676498 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTA-ATACTTGGGCTG 22676556 Query 26709 ATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACT 26768 || | | ||||| ||||| || || | ||||| |||||||| ||||||||||| |||| Sbjct 22676557 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 22676616 Query 26769 TTCCACTTGACTTAGC 26784 | || || || |||| Sbjct 22676617 TCCCTCTAGATCTAGC 22676632 Score = 89.7 bits (98), Expect = 2e-13 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || || ||||| ||||| |||||||| ||||||||||| ||||| || || ||| Sbjct 45407172 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATTTATTTT 45407113 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || ||||||| || || ||||| ||||| || || | |||| | || || |||||| Sbjct 45407112 GGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTT-TTTCTT 45407054 Query 26579 -GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGG 26633 ||| ||||||| | || || || ||| | || | | ||||| | || |||| Sbjct 45407053 GGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTGATTTAGGTATTAGTACTATGG 45406998 >seq5 Length=28563423 Score = 452 bits (500), Expect = 1e-122 Identities = 692/977 (71%), Gaps = 7/977 (1%) Strand=Plus/Minus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || ||||| || ||||| || | |||||||||| || | ||||| || Sbjct 14559539 TGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCCT 14559480 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| | ||| ||||| | |||||||||||||| || || ||||| Sbjct 14559479 ACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGA 14559421 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATC 25989 ||| ||||| || || ||||| ||||| || || ||| | || ||||||||||| || || Sbjct 14559420 TATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTC 14559361 Query 25990 AGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC 26049 || || | | || | ||| ||||||||| | || |||||||| || || ||||| Sbjct 14559360 TGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGC 14559301 Query 26050 TGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTT 26109 || | | || || || |||||||||| || || ||| | || ||| | | ||||| Sbjct 14559300 TGCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 14559241 Query 26110 CTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAAT 26169 |||| | || ||||| ||| || | |||||||||| || | | | || || Sbjct 14559240 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG-TTTGGTAT 14559182 Query 26170 GAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTT 26229 | || ||||| ||||||||||| |||| || | | || || || || ||||| Sbjct 14559181 GCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTT 14559122 Query 26230 AGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTAC 26289 |||| ||| | || ||||| || || |||||| |||||| | || || |||||||| Sbjct 14559121 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 14559062 Query 26290 TTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATAT 26349 ||| ||||||||| | |||||||| ||||| || || || || ||||| |||| || || Sbjct 14559061 TTTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCA-TCATTTCACAT 14559003 Query 26350 GGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGT 26409 | ||||| ||||| |||||||| || | || ||| ||||||||| || ||||| Sbjct 14559002 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 14558943 Query 26410 TACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTT 26469 || || | || ||||| || || | | || ||| | || || || || Sbjct 14558942 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 14558883 Query 26470 TGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAAT 26529 ||| ||||| |||||||| ||||||||||| || || || || || ||||| ||||||| Sbjct 14558882 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAAT 14558823 Query 26530 TTTTCAGTATGCGAGTTTTAATAAC-AGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGC 26588 || || ||||| ||||| || ||| | ||||| | || ||||| | ||| |||||| Sbjct 14558822 CTTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGC 14558763 Query 26589 CGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATG 26648 | || || || || ||| | || || | ||||| | || |||| || |||||||||| Sbjct 14558762 CTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATG 14558703 Query 26649 GTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCT 26707 | || || || ||||| || ||||| ||| || || | | || || ||| |||||| Sbjct 14558702 GATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTA-ATACTTGGGCT 14558644 Query 26708 GATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAAC 26767 ||| | | ||||| ||||| || || | ||||| |||||||| ||||||||||| ||| Sbjct 14558643 GATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAAC 14558584 Query 26768 TTTCCACTTGACTTAGC 26784 || || || || |||| Sbjct 14558583 TTCCCTCTAGATCTAGC 14558567 >seq1 Length=75119905 Score = 378 bits (418), Expect = 2e-100 Identities = 548/770 (71%), Gaps = 3/770 (0%) Strand=Plus/Minus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || ||||| || ||||| || | ||||||||||| || | ||||| || Sbjct 3929689 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 3929630 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| ||| ||||| | |||||||||||||| || || ||||| Sbjct 3929629 ACCTTATTGACCGCAACTTT-TGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGA 3929571 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATC 25989 ||| ||||| || || ||||| ||||| || || ||| | || ||||||||||| || || Sbjct 3929570 TATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTC 3929511 Query 25990 AGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC 26049 || || | | || | ||| ||||||||| | || |||||||| || |||||||| Sbjct 3929510 TGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGC 3929451 Query 26050 TGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTT 26109 || | | || || ||| |||||||||| || || ||| | || ||| | | ||||| Sbjct 3929450 TGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 3929391 Query 26110 CTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAAT 26169 |||| | || ||||| ||| || | |||||||||| || | | | || || Sbjct 3929390 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTAT 3929331 Query 26170 GAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTT 26229 | | || ||||| |||||||||| |||| || | | || || || || ||||| Sbjct 3929330 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTT 3929271 Query 26230 AGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTAC 26289 |||| ||| | || ||||| || || |||||| |||||| | || || |||||||| Sbjct 3929270 GATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 3929211 Query 26290 TTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATAT 26349 ||| ||||||||| | |||||||| ||||| || || || || ||||| ||||| || || Sbjct 3929210 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 3929151 Query 26350 GGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGT 26409 | ||||| ||||| |||||||| || | || ||| ||||||||| || ||||| Sbjct 3929150 GTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 3929091 Query 26410 TACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTT 26469 || || | || ||||| || || | | || ||| | || || || || Sbjct 3929090 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 3929031 Query 26470 TGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAAT 26529 ||| ||||| |||||||| ||||||||||| ||||| || || || ||||| ||||||| Sbjct 3929030 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 3928971 Query 26530 TTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 || || ||||| ||||| || ||| |||||| | || ||| |||||| Sbjct 3928970 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC-TTCTTG 3928922 >seq3 Length=59935730 Score = 223 bits (246), Expect = 1e-53 Identities = 310/432 (72%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 26354 GGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACT 26413 ||||| ||||| |||||||| || | || ||| ||||||||| || ||||| || Sbjct 16821706 GGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 16821765 Query 26414 TCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGG 26473 || | || ||||| || || | | || ||| | || || || ||||| Sbjct 16821766 TCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGT 16821825 Query 26474 CAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTT 26533 ||||| |||||||| ||||||||||| ||||| || || || ||||| ||||||| || Sbjct 16821826 CAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTC 16821885 Query 26534 CAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTT 26593 || ||||| ||||| || ||| |||||| | || ||||| | ||| ||||||| || Sbjct 16821886 CAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTA 16821945 Query 26594 GTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTT 26653 || || || ||| | || || | ||||| | || ||||| || ||||||||||| || Sbjct 16821946 GTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTC 16822005 Query 26654 AACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCTGATGT 26712 || || ||||| || ||||| ||| || || | | || || ||| ||||||||| | Sbjct 16822006 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTA-ATACTTGGGCTGATAT 16822064 Query 26713 ATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCC 26772 | ||||| ||||| || || | ||||| |||||||| ||||||||||| ||||| || Sbjct 16822065 CATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCC 16822124 Query 26773 ACTTGACTTAGC 26784 || || |||| Sbjct 16822125 TCTAGATCTAGC 16822136 Score = 100 bits (110), Expect = 8e-17 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || ||||| || | ||| || | |||||||| || || | ||||| || Sbjct 15391372 TGGATAACTAGCACTGAAAATCATCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 15391313 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| | ||| ||||| | ||||| |||||||| || || ||||| Sbjct 15391312 ACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTAATCGCAGCCCCTCCAGTAGA 15391254 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATAT 25983 ||| ||||| || || ||||| ||||| || || ||| | || ||||||||||| Sbjct 15391253 TATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATAT 15391200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146726351213472