Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq28 517 3e-142 seq4 511 1e-140 seq5 484 2e-132 seq1 434 3e-117 seq3 194 5e-45 >seq28 Length=135199 Score = 517 bits (572), Expect = 3e-142 Identities = 707/983 (72%), Gaps = 6/983 (1%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| ||||| || || ||||||||||| || ||||| || ||||| |||||||| || | Sbjct 122 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 181 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 | |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 182 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 241 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || || |||||||| | || | ||| || Sbjct 242 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 301 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||| |||||| |||||| || || || Sbjct 302 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 361 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 362 GAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATA 421 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 |||||||| ||||| || ||||| || || | || ||||||| |||| ||||| Sbjct 422 AGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTC 481 Query 36329 ACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 36385 | || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 482 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCC 538 Query 36386 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 36445 ||| || || || ||||| | ||| || || |||||||||||||| ||||| || ||||| Sbjct 539 GAAAACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCTG 598 Query 36446 AAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACT 36505 || |||| |||||| |||||||| || || || || | |||||||||||||||||| || Sbjct 599 GAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCT 658 Query 36506 CCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATA 36565 ||||| |||| |||||| | ||||| |||||| || ||||||||||| |||||||| Sbjct 659 TCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATA 718 Query 36566 AGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAA 36625 || ||| ||||| || | |||||| | | ||||||||||||| | || |||| Sbjct 719 TGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCAT 778 Query 36626 GTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATA 36685 ||| | | ||||| | ||||| | ||||| || | ||| || || || || || Sbjct 779 ATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTA 838 Query 36686 TAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTT 36745 |||||| || || | || |||||||||||| |||||||| ||||| | |||||||| Sbjct 839 TAACCATTCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCGC 898 Query 36746 CGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGAC 36805 || | || | || || |||||||| || ||||||||||| ||||| | || || || Sbjct 899 AGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAAC 958 Query 36806 AGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGC 36865 |||||| ||||||||||| ||||| || ||||| || || | || || || | |||| | Sbjct 959 AGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATAC 1018 Query 36866 TGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 36925 | ||| || || | | ||||||||| | || || ||||| || | || || || Sbjct 1019 AGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACG 1078 Query 36926 GTTGTTTGTACTTGTAACCCAGT 36948 || | || || || | ||||| Sbjct 1079 ATTTTCAGTGCTAGTTATCCAGT 1101 >seq4 Length=48772488 Score = 511 bits (566), Expect = 1e-140 Identities = 706/983 (72%), Gaps = 6/983 (1%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| ||||| || || ||||||||||| || ||||| || ||||| |||||||| || | Sbjct 22676636 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 22676577 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 | |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 22676576 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 22676517 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || || |||||||| | || | ||| || Sbjct 22676516 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 22676457 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||| |||||| |||||| || || || Sbjct 22676456 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 22676397 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 22676396 GAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATA 22676337 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 |||||||| ||||| || ||||| || || | || ||||||| |||| ||||| Sbjct 22676336 AGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTC 22676277 Query 36329 ACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 36385 | || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 22676276 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCC 22676220 Query 36386 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 36445 || || || || ||||| | ||| || || |||||||||||||| ||||| |||||||| Sbjct 22676219 AAAAACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTG 22676160 Query 36446 AAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACT 36505 || |||| |||||| |||||||| || || || || | |||||||||||||||||| || Sbjct 22676159 GAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCT 22676100 Query 36506 CCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATA 36565 ||||| |||| |||||| | ||||| |||||| || ||||||||||| |||||||| Sbjct 22676099 TCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATA 22676040 Query 36566 AGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAA 36625 || ||| ||||| || | |||||| | | ||||||||||||| | || |||| Sbjct 22676039 TGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCAT 22675980 Query 36626 GTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATA 36685 ||| | | ||||| | ||||| | ||||| || | ||| || || || || || Sbjct 22675979 ATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTA 22675920 Query 36686 TAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTT 36745 |||||| || || | || |||||||||||| |||||||| ||||| | |||||||| Sbjct 22675919 TAACCATTCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCGC 22675860 Query 36746 CGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGAC 36805 || | || | || || |||||||| || ||||||||||| ||||| | || || | Sbjct 22675859 AGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAAT 22675800 Query 36806 AGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGC 36865 |||||| ||||||||||| ||||| || ||||| || || | || || || | |||| | Sbjct 22675799 AGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATAC 22675740 Query 36866 TGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 36925 | ||| || || | | ||||||||| | || || ||||| || | || || || Sbjct 22675739 AGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACG 22675680 Query 36926 GTTGTTTGTACTTGTAACCCAGT 36948 || | || || || | ||||| Sbjct 22675679 ATTTTCAGTGCTAGTTATCCAGT 22675657 Score = 95.1 bits (104), Expect = 4e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 36168 GGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAG 36227 ||||||||||||| ||| || |||||| | | || || |||||||| |||||| Sbjct 45407042 GGCCAAGCAGCCAAGAAAAAGTGTAAAGAAGGAGAGTCGTTGAAACTAGCATATTGGAAG 45407101 Query 36228 ATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCG 36287 || | || ||||| || |||||| || ||||| ||||| |||||||| ||||| || Sbjct 45407102 ATTAATCGGCCAAAATAAATATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCA 45407161 Query 36288 AATTTATATCCATAGTTCTGAGATTCA 36314 ||||| || || | ||| ||||||| Sbjct 45407162 AATTTGTAACCCTCGTTAGCAGATTCA 45407188 >seq5 Length=28563423 Score = 484 bits (536), Expect = 2e-132 Identities = 703/984 (71%), Gaps = 9/984 (1%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| ||||| || || ||||||||||| || ||||| || ||||| |||||||| || | Sbjct 14558563 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 14558622 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 | |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 14558623 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTAC 14558682 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || || ||||||| | || | ||| || Sbjct 14558683 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGT 14558742 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA-TTAT 36207 | ||| || | || ||||||||||||| |||||| |||||| | | | || | Sbjct 14558743 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAGAGAGTTGT 14558802 Query 36208 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 36267 | || |||||||| |||||||| | || ||||| || ||||||||||| ||||| |||| Sbjct 14558803 TGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTAT 14558862 Query 36268 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 36327 | |||||||| ||||| || ||||| || || | || ||||||| |||| |||| Sbjct 14558863 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTT 14558922 Query 36328 CACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCAC 36384 | | || || | |||| || |||| || ||||||||| ||||| | || | Sbjct 14558923 CCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGC 14558979 Query 36385 CGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCT 36444 |||| || || || ||||| | ||| || || | |||||||||||| ||||| ||||||| Sbjct 14558980 CGAAAACACCAGCTACACCTAACATGTGAAATG-ATGCATAAGGATGTTGTGCTCTGCCT 14559038 Query 36445 GAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAAC 36504 | || |||| |||||| || ||||| || || || || | |||||||||||||||||| | Sbjct 14559039 GGAATACAATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGC 14559098 Query 36505 TCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAAT 36564 | ||||| |||| |||||| | ||||| |||||| || ||||||||||| ||||||| Sbjct 14559099 TTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAAT 14559158 Query 36565 AAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA 36624 | || ||| ||||| || |||||| | | ||||||||||||| | || |||| Sbjct 14559159 ATGCAACAACAATCCAAGGGTGCATACCAAACGGA-AACTAAGTTCCCACTCACGACCCA 14559217 Query 36625 AGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTAT 36684 ||| | | ||||| | ||||| | ||||| || | ||| || || || || | Sbjct 14559218 TATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGT 14559277 Query 36685 ATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGT 36744 |||| || || || | || ||||||||| || |||||||| ||||| | |||||||| Sbjct 14559278 ATAATCATTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCCG 14559337 Query 36745 TCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGA 36804 || | || | || || |||||||| || ||||||||||| ||||| | || || | Sbjct 14559338 CAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAA 14559397 Query 36805 CAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATG 36864 ||||||| ||||||||||| ||||| || ||||| || || | || || || | |||| Sbjct 14559398 CAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATA 14559457 Query 36865 CTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGC 36924 | | ||| || || | | ||||||||| | || || ||||| | | || || | Sbjct 14559458 CAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCTGATGTAAAGAC 14559517 Query 36925 GGTTGTTTGTACTTGTAACCCAGT 36948 | || | || || || | ||||| Sbjct 14559518 GATTTTCAGTGCTAGTTATCCAGT 14559541 >seq1 Length=75119905 Score = 434 bits (480), Expect = 3e-117 Identities = 565/777 (73%), Gaps = 6/777 (1%) Strand=Plus/Plus Query 36175 CAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTC 36234 |||||| |||||| |||||| || || || || |||||||| |||||||| | || Sbjct 3928918 CAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATC 3928977 Query 36235 TCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTAT 36294 ||||| || |||||||| || ||||| ||||| |||||||| ||||| || ||||| | Sbjct 3928978 GGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGT 3929037 Query 36295 ATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--AAGT-GAGGAAGTAACAA 36351 | || | || ||||||| |||| ||||| | || || | |||| || ||| Sbjct 3929038 AACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGT--TACCAA 3929095 Query 36352 GACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATAT 36411 | || ||||||||| ||||| | || ||||| || || || ||||| | ||| | Sbjct 3929096 GGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGT 3929154 Query 36412 GGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCC 36471 | || |||||||||||||| ||||| |||||||| || |||| |||||| |||||||| | Sbjct 3929155 GAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTAC 3929214 Query 36472 CTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGA 36531 | || || || | |||||||||||||||||| || ||||| |||| |||||| | |||| Sbjct 3929215 CAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGA 3929274 Query 36532 ATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATAC 36591 | |||||| || ||||||||||| |||||||| || ||| ||||| || | ||||| Sbjct 3929275 AAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATAC 3929334 Query 36592 CTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGT 36651 | | | ||||||||||||| | || |||| ||| | | ||||| | |||| Sbjct 3929335 CCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGT 3929394 Query 36652 GGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTT 36711 | | ||||| || | ||| || || || || |||||||| || || | || |||||||| Sbjct 3929395 GTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTT 3929454 Query 36712 CCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGA 36771 |||| |||||||| ||||| | |||||||| || | || | || || ||||||| Sbjct 3929455 CCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGA 3929514 Query 36772 TGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCA 36831 | || ||||||||||| ||||| | || || |||||||| ||||||||||| ||||| | Sbjct 3929515 TAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTA 3929574 Query 36832 CGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGA 36891 | ||||| || || | || || || | |||| | ||| || || | | ||||| Sbjct 3929575 CTGGAGGGGCTGCGATGAAGGCGATAATAAATACAAAAGTTGCGGTCAATAAGGTAGGGA 3929634 Query 36892 TCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 36948 |||| | || || ||||| || | || || || || | || || || | ||||| Sbjct 3929635 TCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTTATCCAGT 3929691 >seq3 Length=59935730 Score = 194 bits (214), Expect = 5e-45 Identities = 314/447 (70%), Gaps = 6/447 (1%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| ||||| || || ||||||||||| || ||||| || ||||| |||||||| || | Sbjct 16822140 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 16822081 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 | |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 16822080 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 16822021 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || || |||||||| | || | ||| || Sbjct 16822020 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 16821961 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||| |||||| |||||| || || || Sbjct 16821960 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 16821901 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 16821900 GAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATA 16821841 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 |||||||| ||||| || ||||| || || | || ||||||| |||| ||||| Sbjct 16821840 AGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTC 16821781 Query 36329 ACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 36385 | || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 16821780 CCTGATCAAACTAGAGG--TTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCC 16821724 Query 36386 GAATACCCCTGCAACACCGAGCATATG 36412 ||| || || || ||||| | ||| || Sbjct 16821723 GAAAACACCAGCTACACCTAACATGTG 16821697 Score = 86.0 bits (94), Expect = 2e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 36774 ATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACG 36833 || ||||||||||| ||||| | || || |||||||| ||||||||||| ||||| || Sbjct 15391200 ATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACT 15391259 Query 36834 GGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATC 36893 ||||| || || | || || || | |||| | | ||| || || | | ||||||| Sbjct 15391260 GGAGGGGCTGCGATTAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATC 15391319 Query 36894 ATTAGTACCCCAAACCACCC 36913 || | || |||||||| || Sbjct 15391320 ATCAAAACACCAAACCATCC 15391339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150454349973912