Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq28 504 2e-138 seq4 500 3e-137 seq5 473 4e-129 seq1 425 2e-114 seq3 196 1e-45 >seq28 Length=135199 Score = 504 bits (558), Expect = 2e-138 Identities = 702/979 (72%), Gaps = 6/979 (1%) Strand=Plus/Plus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| || |||||||||||||| || ||||| || ||||| |||||||| || | | Sbjct 126 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 185 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | || | || | |||||| || || Sbjct 186 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 245 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || || |||||||| | || | ||| || | | Sbjct 246 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 305 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||||| |||||| |||||| ||| || || || Sbjct 306 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 365 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| ||| Sbjct 366 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 425 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| || ||||| || || | || ||||||| |||| ||||| | Sbjct 426 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 485 Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869 || || | |||| || |||| || ||||||||| ||||| | || ||||| Sbjct 486 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAAA 542 Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929 || || || ||||| | ||| || || |||||||||||||| ||||| || ||||| || Sbjct 543 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCTGGAAT 602 Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989 |||| |||||| |||||||| || || || || | |||||||||||||||||| || ||| Sbjct 603 ACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCT 662 Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049 || |||| |||||| | ||||| |||||| || ||||||||||| |||||||| || Sbjct 663 TGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCA 722 Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109 ||| ||||| || | ||| || | | ||||||||||||| | || |||| ||| Sbjct 723 ACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAA 782 Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169 | | || | | ||||| | ||||| || | ||| || ||||| || || ||| Sbjct 783 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 842 Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229 || || || | || |||||||||||| |||||||| ||||| | |||||||| ||| Sbjct 843 CATTCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAA 902 Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289 | || | || || || ||||| || ||||||||||| ||||| | || || |||||| Sbjct 903 GTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGC 962 Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349 || ||||||||||| ||||| || ||||| || || | || || || | |||| | | Sbjct 963 TCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGAA 1022 Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 26409 ||| || || | | ||||||||| | || || ||||| || | || || || || Sbjct 1023 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTT 1082 Query 26410 TTTGTACTTGTAACCCAGT 26428 | || || || | ||||| Sbjct 1083 TCAGTGCTAGTTATCCAGT 1101 >seq4 Length=48772488 Score = 500 bits (554), Expect = 3e-137 Identities = 701/979 (72%), Gaps = 6/979 (1%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| || |||||||||||||| || ||||| || ||||| |||||||| || | | Sbjct 22676632 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 22676573 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | || | || | |||||| || || Sbjct 22676572 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 22676513 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || || |||||||| | || | ||| || | | Sbjct 22676512 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 22676453 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||||| |||||| |||||| ||| || || || Sbjct 22676452 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 22676393 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| ||| Sbjct 22676392 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 22676333 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| || ||||| || || | || ||||||| |||| ||||| | Sbjct 22676332 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 22676273 Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869 || || | |||| || |||| || ||||||||| ||||| | || || || Sbjct 22676272 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCAAAA 22676216 Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929 || || || ||||| | ||| || || |||||||||||||| ||||| |||||||| || Sbjct 22676215 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAAT 22676156 Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989 |||| |||||| |||||||| || || || || | |||||||||||||||||| || ||| Sbjct 22676155 ACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCT 22676096 Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049 || |||| |||||| | ||||| |||||| || ||||||||||| |||||||| || Sbjct 22676095 TGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCA 22676036 Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109 ||| ||||| || | ||| || | | ||||||||||||| | || |||| ||| Sbjct 22676035 ACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAA 22675976 Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169 | | || | | ||||| | ||||| || | ||| || ||||| || || ||| Sbjct 22675975 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 22675916 Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229 || || || | || |||||||||||| |||||||| ||||| | |||||||| ||| Sbjct 22675915 CATTCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCGCAGAA 22675856 Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289 | || | || || || ||||| || ||||||||||| ||||| | || || | |||| Sbjct 22675855 GTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAATAGGC 22675796 Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349 || ||||||||||| ||||| || ||||| || || | || || || | |||| | | Sbjct 22675795 TCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGAA 22675736 Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 26409 ||| || || | | ||||||||| | || || ||||| || | || || || || Sbjct 22675735 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTT 22675676 Query 26410 TTTGTACTTGTAACCCAGT 26428 | || || || | ||||| Sbjct 22675675 TCAGTGCTAGTTATCCAGT 22675657 Score = 98.7 bits (108), Expect = 3e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 25648 GGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAG 25707 ||||||||||||| ||| || |||||| | | | || || |||||||| |||||| Sbjct 45407042 GGCCAAGCAGCCAAGAAAAAGTGTAAAGAAGGAGAGTCGTTGAAACTAGCATATTGGAAG 45407101 Query 25708 ATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCG 25767 || | || ||||| || |||||| || ||||| ||||| |||||||| ||||| || Sbjct 45407102 ATTAATCGGCCAAAATAAATATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCA 45407161 Query 25768 AATTTATATCCATAGTTCTGAGATTCA 25794 ||||| || || | ||| ||||||| Sbjct 45407162 AATTTGTAACCCTCGTTAGCAGATTCA 45407188 >seq5 Length=28563423 Score = 473 bits (524), Expect = 4e-129 Identities = 698/980 (71%), Gaps = 9/980 (1%) Strand=Plus/Plus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| || |||||||||||||| || ||||| || ||||| |||||||| || | | Sbjct 14558567 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 14558626 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | || | || | |||||| || || Sbjct 14558627 GCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTACAGAT 14558686 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || || ||||||| | || | ||| || | | Sbjct 14558687 TGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGTGAAC 14558746 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA-TTATTAAA 25691 || || | || ||||||||||||| |||||| |||||| || | | || || || Sbjct 14558747 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAGAGAGTTGTTGAA 14558806 Query 25692 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 25751 |||||||| |||||||| | || ||||| || ||||||||||| ||||| ||||| || Sbjct 14558807 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTATAAGT 14558866 Query 25752 CTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACG 25811 |||||| ||||| || ||||| || || | || ||||||| |||| ||||| | Sbjct 14558867 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 14558926 Query 25812 AAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 25868 || || | |||| || |||| || ||||||||| ||||| | || ||||| Sbjct 14558927 GATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAA 14558983 Query 25869 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAA 25928 || || || ||||| | ||| || || | |||||||||||| ||||| |||||||| || Sbjct 14558984 AACACCAGCTACACCTAACATGTGAAATG-ATGCATAAGGATGTTGTGCTCTGCCTGGAA 14559042 Query 25929 GACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCC 25988 |||| |||||| || ||||| || || || || | |||||||||||||||||| || || Sbjct 14559043 TACAATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCC 14559102 Query 25989 TTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGC 26048 ||| |||| |||||| | ||||| |||||| || ||||||||||| |||||||| || Sbjct 14559103 TTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGC 14559162 Query 26049 TACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 26108 ||| ||||| || ||| || | | ||||||||||||| | || |||| || Sbjct 14559163 AACAACAATCCAAGGGTGCATACC-AAACGGAAACTAAGTTCCCACTCACGACCCATATA 14559221 Query 26109 AGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAA 26168 | | | || | | ||||| | ||||| || | ||| || ||||| || || || Sbjct 14559222 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAA 14559281 Query 26169 CCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGA 26228 || || || | || ||||||||| || |||||||| ||||| | |||||||| ||| Sbjct 14559282 TCATTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGA 14559341 Query 26229 TGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG 26288 | || | || || || ||||| || ||||||||||| ||||| | || || ||||| Sbjct 14559342 AGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 14559401 Query 26289 CTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGT 26348 ||| ||||||||||| ||||| || ||||| || || | || || || | |||| | | Sbjct 14559402 CTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGA 14559461 Query 26349 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 26408 ||| || || | | ||||||||| | || || ||||| | | || || || || Sbjct 14559462 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCTGATGTAAAGACGATT 14559521 Query 26409 GTTTGTACTTGTAACCCAGT 26428 | || || || | ||||| Sbjct 14559522 TTCAGTGCTAGTTATCCAGT 14559541 >seq1 Length=75119905 Score = 425 bits (470), Expect = 2e-114 Identities = 563/777 (72%), Gaps = 6/777 (1%) Strand=Plus/Plus Query 25655 CAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTC 25714 |||||| |||||| |||||| ||| || || || |||||||| |||||||| | || Sbjct 3928918 CAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATC 3928977 Query 25715 TCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTAT 25774 ||||| || |||||||| || ||||| ||||| |||||||| ||||| || ||||| | Sbjct 3928978 GGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGT 3929037 Query 25775 ATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--AAGT-GAGGAAGTAACAA 25831 | || | || ||||||| |||| ||||| | || || | |||| || ||| Sbjct 3929038 AACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGT--TACCAA 3929095 Query 25832 GACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATAT 25891 | || ||||||||| ||||| | || ||||| || || || ||||| | ||| | Sbjct 3929096 GGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGT 3929154 Query 25892 GGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCC 25951 | || |||||||||||||| ||||| |||||||| || |||| |||||| |||||||| | Sbjct 3929155 GAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTAC 3929214 Query 25952 CTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGA 26011 | || || || | |||||||||||||||||| || ||||| |||| |||||| | |||| Sbjct 3929215 CAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGA 3929274 Query 26012 ATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATGC 26071 | |||||| || ||||||||||| |||||||| || ||| ||||| || | ||| | Sbjct 3929275 AAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATAC 3929334 Query 26072 CTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATGCCGATGAGAAAGT 26131 | | | ||||||||||||| | || |||| ||| | | || | | |||| Sbjct 3929335 CCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGT 3929394 Query 26132 GGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTT 26191 | | ||||| || | ||| || ||||| || || ||||| || || | || |||||||| Sbjct 3929395 GTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTT 3929454 Query 26192 CCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGA 26251 |||| |||||||| ||||| | |||||||| ||| | || | || || || |||| Sbjct 3929455 CCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGA 3929514 Query 26252 TGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCA 26311 | || ||||||||||| ||||| | || || |||||||| ||||||||||| ||||| | Sbjct 3929515 TAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTA 3929574 Query 26312 CGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGA 26371 | ||||| || || | || || || | |||| | ||| || || | | ||||| Sbjct 3929575 CTGGAGGGGCTGCGATGAAGGCGATAATAAATACAAAAGTTGCGGTCAATAAGGTAGGGA 3929634 Query 26372 TCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 26428 |||| | || || ||||| || | || || || || | || || || | ||||| Sbjct 3929635 TCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTTATCCAGT 3929691 >seq3 Length=59935730 Score = 196 bits (216), Expect = 1e-45 Identities = 312/443 (70%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| || |||||||||||||| || ||||| || ||||| |||||||| || | | Sbjct 16822136 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 16822077 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | || | || | |||||| || || Sbjct 16822076 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 16822017 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || || |||||||| | || | ||| || | | Sbjct 16822016 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 16821957 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||||| |||||| |||||| ||| || || || Sbjct 16821956 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 16821897 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| ||| Sbjct 16821896 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 16821837 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| || ||||| || || | || ||||||| |||| ||||| | Sbjct 16821836 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 16821777 Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869 || || | |||| || |||| || ||||||||| ||||| | || ||||| Sbjct 16821776 ATCAAACTAGAGG--TTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCCGAAA 16821720 Query 25870 ACCCCTGCAACACCGAGCATATG 25892 || || || ||||| | ||| || Sbjct 16821719 ACACCAGCTACACCTAACATGTG 16821697 Score = 86.0 bits (94), Expect = 2e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 26254 ATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACG 26313 || ||||||||||| ||||| | || || |||||||| ||||||||||| ||||| || Sbjct 15391200 ATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACT 15391259 Query 26314 GGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATC 26373 ||||| || || | || || || | |||| | | ||| || || | | ||||||| Sbjct 15391260 GGAGGGGCTGCGATTAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATC 15391319 Query 26374 ATTAGTACCCCAAACCACCC 26393 || | || |||||||| || Sbjct 15391320 ATCAAAACACCAAACCATCC 15391339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151993549462128