Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq28 614 6e-171 seq4 609 3e-169 seq5 574 5e-159 seq1 468 6e-127 seq3 324 2e-83 >seq28 Length=135199 Score = 614 bits (680), Expect = 6e-171 Identities = 717/967 (74%), Gaps = 6/967 (1%) Strand=Plus/Minus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| ||||| | || |||| ||||||||||| |||||||||||| ||| | | || Sbjct 1085 TGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 1026 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | || || || || || ||||| ||||| |||||||| ||||| |||||||| | Sbjct 1025 AACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCG 966 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || |||||| | ||||| | || ||||| ||||| || |||||||||||| | |||| Sbjct 965 CGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCC 906 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || ||| || || || | ||||| || || || |||||||| ||| | ||||||| Sbjct 905 TACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGATGA 846 Query 162762 GTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC 162821 ||||| || |||||||| |||| | || | || | |||||| | | || | Sbjct 845 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT--- 789 Query 162822 AGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGAT 162878 ||| | | | |||||| ||||||||||| || ||| || |||||||| |||||||| Sbjct 788 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 729 Query 162879 CTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTT 162938 ||||||||| || || || || | || || ||||| |||||| | || ||| | Sbjct 728 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 669 Query 162939 CGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACAT 162998 |||||||| |||||||| | |||||| | || || ||||||||||| |||| || Sbjct 668 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 609 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 | | || ||||| || |||||||||||||| ||||| || || || ||| | || || || Sbjct 608 GATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 549 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 ||||| ||||| ||||| || || ||||||||||| ||||| | || || ||| | | Sbjct 548 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 489 Query 163119 TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGA 163178 ||||| ||||||||||| | || || || | ||||| || || || ||||| || Sbjct 488 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 429 Query 163179 AGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 ||||||||| || ||||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct 428 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 369 Query 163239 ATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCAT 163298 |||||||||||| ||||| | ||||||||| | ||||| | ||||| || | || Sbjct 368 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAAT 309 Query 163299 CTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAA 163358 |||||||||||| | ||| | |||||||| |||||||| || || ||||| ||||| Sbjct 308 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAA 249 Query 163359 CCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAG 163418 |||||| || ||||| ||| || ||| ||||||||| |||||| | ||| | Sbjct 248 CCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 189 Query 163419 AGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCT 163478 || |||||||||||||| |||||||| |||||||||||||||||||| || || || Sbjct 188 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 129 Query 163479 TGCTGCT 163485 |||||| Sbjct 128 AGCTGCT 122 >seq4 Length=48772488 Score = 609 bits (674), Expect = 3e-169 Identities = 716/967 (74%), Gaps = 6/967 (1%) Strand=Plus/Plus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| ||||| | || |||| ||||||||||| |||||||||||| ||| | | || Sbjct 22675673 TGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 22675732 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | || || || || || ||||| ||||| |||||||| ||||| |||||||| | Sbjct 22675733 AACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCG 22675792 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || ||| || | ||||| | || ||||| ||||| || |||||||||||| | |||| Sbjct 22675793 CGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCC 22675852 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || ||| || || || | ||||| || || || |||||||| ||| | ||||||| Sbjct 22675853 TACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGCTGCATCCGTTGATGA 22675912 Query 162762 GTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC 162821 ||||| || |||||||| |||| | || | || | |||||| | | || | Sbjct 22675913 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT--- 22675969 Query 162822 AGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGAT 162878 ||| | | | |||||| ||||||||||| || ||| || |||||||| |||||||| Sbjct 22675970 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 22676029 Query 162879 CTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTT 162938 ||||||||| || || || || | || || ||||| |||||| | || ||| | Sbjct 22676030 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 22676089 Query 162939 CGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACAT 162998 |||||||| |||||||| | |||||| | || || ||||||||||| |||| || Sbjct 22676090 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 22676149 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 | | || ||||| ||||||||||||||||| ||||| || || || ||| | || || || Sbjct 22676150 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 22676209 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 ||||| || || ||||| || || ||||||||||| ||||| | || || ||| | | Sbjct 22676210 TGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 22676269 Query 163119 TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGA 163178 ||||| ||||||||||| | || || || | ||||| || || || ||||| || Sbjct 22676270 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 22676329 Query 163179 AGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 ||||||||| || ||||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct 22676330 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 22676389 Query 163239 ATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCAT 163298 |||||||||||| ||||| | ||||||||| | ||||| | ||||| || | || Sbjct 22676390 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAAT 22676449 Query 163299 CTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAA 163358 |||||||||||| | ||| | |||||||| |||||||| || || ||||| ||||| Sbjct 22676450 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAA 22676509 Query 163359 CCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAG 163418 |||||| || ||||| ||| || ||| ||||||||| |||||| | ||| | Sbjct 22676510 CCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 22676569 Query 163419 AGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCT 163478 || |||||||||||||| |||||||| |||||||||||||||||||| || || || Sbjct 22676570 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 22676629 Query 163479 TGCTGCT 163485 |||||| Sbjct 22676630 AGCTGCT 22676636 Score = 118 bits (130), Expect = 1e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 163150 AACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGA 163209 ||| | ||||| || || || ||||| ||||||||||| || ||||| ||||||||| Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 163210 TACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTC 163269 || ||||| || || |||||||| ||||| ||||||| |||| | ||| | ||||| Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTTT 45407059 Query 163270 TTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTG 163309 ||| | ||||| | |||| || | ||||||||||||| Sbjct 45407058 TTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTG 45407019 >seq5 Length=28563423 Score = 574 bits (636), Expect = 5e-159 Identities = 714/971 (74%), Gaps = 15/971 (2%) Strand=Plus/Minus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| ||||| | || || | ||||||||||| |||||||||||| ||| | | || Sbjct 14559525 TGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 14559466 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | || || || || || ||||| ||||| |||||||| ||||| |||||||| | Sbjct 14559465 AACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCG 14559406 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || |||||| | ||||| | || ||||| ||||| || |||||||||||| | |||| Sbjct 14559405 CGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCC 14559346 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || ||| || || || | ||||| || || || || ||||| ||| | ||||||| Sbjct 14559345 TACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGCTGCATCCGTTGATGA 14559286 Query 162762 GTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC 162821 || || || |||||||| |||| | || | || | |||||| | | || | Sbjct 14559285 ATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT--- 14559229 Query 162822 AGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGAT 162878 ||| | | | |||||| ||||||||||| || ||| || ||||||| |||||||| Sbjct 14559228 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG-TTTGGTATGCACCCTTGGAT 14559170 Query 162879 CTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTT 162938 ||||||||| || || || || | || || ||||| |||||| | || ||| | Sbjct 14559169 TGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 14559110 Query 162939 CGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACAT 162998 |||||||| |||||||| | |||||| | || || ||||||||||| |||| || Sbjct 14559109 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTAAACTTTAT 14559050 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 | | || ||||| ||||||||||||||||| ||||| | || || ||| | || || || Sbjct 14559049 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCA-TCATTTCACATGTTAGGTGTAGC 14558991 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 ||||| ||||| ||||| || || ||||||||||| ||||| | || || ||| | | Sbjct 14558990 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 14558931 Query 163119 TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGA 163178 ||||| ||||||||||| | || || || | ||||| || || || ||||| || Sbjct 14558930 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 14558871 Query 163179 AGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 ||||||||| || ||||| || |||||||| || ||||| || || |||||||| ||||| Sbjct 14558870 AGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 14558811 Query 163239 ATCTTTCAACAACTCAC-GTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCA 163297 |||||||||||| | |||| | ||||||||| | ||||| | ||||| || | | Sbjct 14558810 TAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAA 14558751 Query 163298 TCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCA 163357 ||||||||||||| | ||| | ||||||| |||||||| || || ||||| |||| Sbjct 14558750 TCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGGATTCAATTTCA 14558691 Query 163358 ACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTA 163414 ||||||| || ||||| |||| || || ||| ||||||||| |||||| | | Sbjct 14558690 ACCAATCTGTAGTTGATAGTCAAGGTCGT---GTTATTAATACTTGGGCTGATATCATCA 14558634 Query 163415 ACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTG 163474 || | || |||||||||||||| |||||||| |||||||||||||||||||| || | Sbjct 14558633 ACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAG 14558574 Query 163475 ACCTTGCTGCT 163485 | || |||||| Sbjct 14558573 ATCTAGCTGCT 14558563 >seq1 Length=75119905 Score = 468 bits (518), Expect = 6e-127 Identities = 561/761 (74%), Gaps = 6/761 (1%) Strand=Plus/Minus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| ||||| | || |||| ||||||||||| |||||||||||| ||| | | || Sbjct 3929675 TGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 3929616 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | | || || || || ||||| ||||| |||||||| ||||| |||||||| | Sbjct 3929615 AACTTTTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCG 3929556 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || |||||| | ||||| | || ||||| ||||| || |||||||||||| | |||| Sbjct 3929555 CGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCC 3929496 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || ||| || || || | ||||| || || || |||||||| ||| | ||||||| Sbjct 3929495 TACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGATGA 3929436 Query 162762 GTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC 162821 ||||| || |||||||| |||| | || | || | |||||| | | || | Sbjct 3929435 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT--- 3929379 Query 162822 AGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGAT 162878 ||| | | | |||||| ||||||||||| || ||| || |||||||| |||||||| Sbjct 3929378 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 3929319 Query 162879 CTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTT 162938 ||||||||| || || || || | || || ||||| |||||| | || ||| | Sbjct 3929318 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 3929259 Query 162939 CGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACAT 162998 |||||||| |||||||| | |||||| | || || ||||||||||| |||| || Sbjct 3929258 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 3929199 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 | | || ||||| ||||||||||||||||| ||||| || || || ||| | || || || Sbjct 3929198 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 3929139 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 ||||| ||||| ||||| || || ||||||||||| ||||| | || || ||| | | Sbjct 3929138 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 3929079 Query 163119 TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGA 163178 ||||| ||||||||||| | || || || | ||||| || || || ||||| || Sbjct 3929078 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 3929019 Query 163179 AGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC 163238 ||||||||| || ||||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct 3929018 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 3928959 Query 163239 ATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTG 163279 |||||||||||| ||||| | ||||||||| | |||| Sbjct 3928958 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTG 3928918 >seq3 Length=59935730 Score = 324 bits (358), Expect = 2e-83 Identities = 338/444 (76%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101 || ||| | || || || ||||| ||||| ||||| || || ||||||||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161 | || || ||| | | ||||| ||||||||||| | || || || | ||||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221 || || || ||||| ||||||||||| || ||||| ||||||||||| || ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281 || |||||||| ||||| |||||||||||| ||||| | ||||||||| | ||||| Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341 | ||||| || | |||||||||||||| | ||| | |||||||| |||||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGG 163401 || || ||||| ||||||||||| || ||||| ||| || ||| ||||||| Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 16822056 Query 163402 GCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCAC 163461 || |||||| | ||| | || |||||||||||||| |||||||| |||||||||||| Sbjct 16822057 GCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCAC 16822116 Query 163462 AACTTCCCACTTGACCTTGCTGCT 163485 |||||||| || || || |||||| Sbjct 16822117 AACTTCCCTCTAGATCTAGCTGCT 16822140 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCA 162598 |||| ||||| ||||| |||||||||||| ||| | | ||| | || || || | Sbjct 15391341 TCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTA 15391282 Query 162599 TTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTT 162658 | || || || ||||| |||||||| ||||| |||||||| | || |||||| | |||| Sbjct 15391281 TCGCCTTAATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTT 15391222 Query 162659 CACTTCTCTATGGTAACAACAT 162680 | | || ||||| ||||| || Sbjct 15391221 CTTTACTTTATGGAAACAATAT 15391200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553084606420320