Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq28 493 1e-134 seq4 489 2e-133 seq5 461 9e-125 seq1 399 3e-106 seq3 208 9e-49 seq2 89.7 6e-13 >seq28 Length=135199 Score = 493 bits (546), Expect = 1e-134 Identities = 681/950 (72%), Gaps = 2/950 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 126 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 185 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 186 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 245 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||| ||||| || | ||||| | || || ||| Sbjct 246 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 305 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 306 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 365 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | || ||||| ||||| || || || || || || || || Sbjct 366 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 425 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| || || || ||||| | || || || | || || ||||| ||| Sbjct 426 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 485 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 486 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAACA 545 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || |||||||| || ||||| ||||| || ||||| || Sbjct 546 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCTGGAATACA 605 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| || || || | ||||||||||||||||| || ||| Sbjct 606 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGA 665 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| ||||| | ||||| ||||| ||||| | || || |||||||| |||||| Sbjct 666 CCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACA 725 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || || | | | |||||||||| | ||||| || Sbjct 726 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 785 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | || ||||||||||||||| || |||||| Sbjct 786 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 845 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||| | ||| |||||||| |||||||| ||||| | |||||| || || | Sbjct 846 TCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTA 905 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || ||||||||||| || ||||| ||||| | |||||||| | || || || Sbjct 906 GGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCG 965 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947 | || || || ||||| || ||||| ||||| || || || | || || ||| | | Sbjct 966 CGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACA-GAAGT 1024 Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 ||| || | |||| || ||||| | |||||| ||||| || | |||| Sbjct 1025 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAA 1074 Score = 342 bits (378), Expect = 6e-89 Identities = 705/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 9652 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 9593 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 9592 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 9533 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || |||||||| || || | Sbjct 9532 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACG 9473 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| || || || || || | || |||| |||| | ||| |||| || || Sbjct 9472 TAAGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGGAC 9413 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | | |||||| ||||| || | |||||| || || || Sbjct 9412 AAATAGCATAAAGAAATGTAACCAACGTTTGTTGGAAAAAGCAACACCAAAGATTTGGGA 9353 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | || || || | ||| |||||||||||| | || || || | || || Sbjct 9352 CCAAAAGCGATTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 9293 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTC--ATACAAT 123283 | ||||| | | ||| ||| |||||| ||| | | Sbjct 9292 GCGAAAAGTATTTGC---------ACCATCACC------------GTCTTCGAATAGAGT 9254 Query 123284 GTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCA 123343 || |||| || || || |||||||| || ||||| | || | |||| || ||| ||| Sbjct 9253 GTTTTCT--ACGGTCGCTCCATGAATAGCGCATAGGAGAGCCGCGCCTAATACTCCGGCA 9196 Query 123344 ACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATA 123403 || |||||||| ||||| || ||||| || || || || ||||| | ||| | ||| Sbjct 9195 ACTCCCATCATATGAAACGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATG 9136 Query 123404 TAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGT 123463 | ||||| || ||||| || || || || || |||||||||| | || || ||| Sbjct 9135 AATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGT 9076 Query 123464 GGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTG 123523 ||||| || || || | | || || ||||| | ||||||||| || ||| || Sbjct 9075 GGATAAATAAGGAATACAGAAACAAAAACAGCGATTGGACCAGAGAATGAGATTGCATTA 9016 Query 123524 TAAGGTCTAA--TGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGA 123581 ||||| | | || || | | || | |||||||| | | |||||||||||| | Sbjct 9015 TAAGGCCGCAATTGAATAGAC--CGAGCAAGTTCAAATTGGCGTAACATGAAACCTATTA 8958 Query 123582 GTCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAA 123641 || |||| | || || | |||||||| ||||||| || || | ||| |||||||| Sbjct 8957 GTGCAAAAGCCCCGTGGAGAGCTACAAAAGTCCATAGGCCACCTAATTGACACCAACGAG 8898 Query 123642 CGAATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGC 123696 || |||||||||||| || ||||| || | || | || | || | | |||| Sbjct 8897 TAAAATCTCCTTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG 8838 Query 123697 GTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGC 123756 |||| || || |||||||| |||||||| || || || | ||| ||| || Sbjct 8837 -----CAGGGGTAGAAACTGCTGCGGTTAAGAAATTACAACCTTCCAAATAGGAACTAGC 8783 Query 123757 AATACCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGA 123816 | ||||| |||||||| || || || || || || ||| ||||| || || | | Sbjct 8782 CAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCACCCTCCTAAAGC 8723 Query 123817 TAGATACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCT 123876 | ||| |||||||| | || || | || |||||||||| || || ||||| || || Sbjct 8722 GAAATAAGCACAAGGAAAGAGCAATAAGCCGGACCATCCTACAAAAACGAAACGGTCCCT 8663 Query 123877 CTTTAACCAGTCGTCAAGAACATCAAA 123903 |||||||||||| | | |||||| Sbjct 8662 TCGTAACCAGTCGTCCACAGTATCAAA 8636 >seq4 Length=48772488 Score = 489 bits (542), Expect = 2e-133 Identities = 680/950 (72%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 22676632 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 22676573 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 22676572 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 22676513 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||| ||||| || | ||||| | || || ||| Sbjct 22676512 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 22676453 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 22676452 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 22676393 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | || ||||| ||||| || || || || || || || || Sbjct 22676392 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 22676333 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| || || || ||||| | || || || | || || ||||| ||| Sbjct 22676332 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 22676273 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || || || | Sbjct 22676272 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCAAAAACA 22676213 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || |||||||| || ||||| |||||||| ||||| || Sbjct 22676212 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACA 22676153 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| || || || | ||||||||||||||||| || ||| Sbjct 22676152 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGA 22676093 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| ||||| | ||||| ||||| ||||| | || || |||||||| |||||| Sbjct 22676092 CCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACA 22676033 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || || | | | |||||||||| | ||||| || Sbjct 22676032 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 22675973 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | || ||||||||||||||| || |||||| Sbjct 22675972 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 22675913 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||| | ||| |||||||| |||||||| ||||| | |||||| || || | Sbjct 22675912 TCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCGCAGAAGTA 22675853 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || ||||||||||| || ||||| ||||| | |||||||| | | || || Sbjct 22675852 GGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAATAGGCTCG 22675793 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947 | || || || ||||| || ||||| ||||| || || || | || || ||| | | Sbjct 22675792 CGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACA-GAAGT 22675734 Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 ||| || | |||| || ||||| | |||||| ||||| || | |||| Sbjct 22675733 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAA 22675684 >seq5 Length=28563423 Score = 461 bits (510), Expect = 9e-125 Identities = 670/940 (71%), Gaps = 5/940 (1%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 14558567 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 14558626 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 14558627 GCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTACAGAT 14558686 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||| |||| || | ||||| | || || ||| Sbjct 14558687 TGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGTGAAC 14558746 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTT-GAGTTGTTGAA 124287 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 14558747 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAGAGAGTTGTTGAA 14558806 Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347 |||||| |||||||| | || ||||| ||||| || || || || || || || || Sbjct 14558807 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTATAAGT 14558866 Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407 ||||| ||||| || || || ||||| | || || || | || || ||||| || Sbjct 14558867 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 14558926 Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467 ||| | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 14558927 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAAC 14558986 Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527 || ||||| ||| |||||| ||| ||||||| || ||||| |||||||| ||||| || Sbjct 14558987 ACCAGCTACACCTAACATGTG-AAATGATGCATAAGGATGTTGTGCTCTGCCTGGAATAC 14559045 Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587 | ||||||||| |||||||| || || || | ||||||||||||||||| || || Sbjct 14559046 AATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTG 14559105 Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647 ||||| ||||| | ||||| ||||| ||||| | || || |||||||| ||||| Sbjct 14559106 ACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAAC 14559165 Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707 | |||||||| |||| || || | | | |||||||||| | ||||| || Sbjct 14559166 AACAATCCAAGGGTGCATACCAAA-CGGAAACTAAGTTCCCACTCACGACCCATATAACA 14559224 Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCA 124767 | | ||||| | |||||| | || | | || ||||||||||||||| || || || Sbjct 14559225 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAATCA 14559284 Query 124768 TTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGA 124827 ||||||||| | ||| ||||| || |||||||| ||||| | |||||| || || | Sbjct 14559285 TTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGT 14559344 Query 124828 TGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTC 124887 |||| || ||||||||||| || ||||| ||||| | |||||||| | || || || Sbjct 14559345 AGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTC 14559404 Query 124888 TCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTG 124946 | || || || ||||| || ||||| ||||| || || || | || || ||| | | Sbjct 14559405 GCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACA-GAAG 14559463 Query 124947 CTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCA 124986 ||| || | |||| || ||||| | |||||| ||||| Sbjct 14559464 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCA 14559503 >seq1 Length=75119905 Score = 399 bits (442), Expect = 3e-106 Identities = 540/750 (72%), Gaps = 2/750 (0%) Strand=Plus/Plus Query 124249 AACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAG 124308 ||| || | ||||||||| | | | ||||||||||| |||||| |||||||| | Sbjct 3928916 AACAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAA 3928975 Query 124309 ACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTT 124368 || ||||| ||||| || || || || || || || || ||||| ||||| || || || Sbjct 3928976 TCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTT 3929035 Query 124369 ATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAG 124428 ||||| | || || || | || || ||||| ||||| | | ||| || || | Sbjct 3929036 GTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGTTACCAA 3929095 Query 124429 AGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCCATGTG 124488 ||||||||||| || ||||| || || ||||| | || ||||| ||| |||||| Sbjct 3929096 GGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGTG 3929155 Query 124489 GAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACC 124548 || |||||||| || ||||| |||||||| ||||| || | |||||||||||||||||| Sbjct 3929156 AAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACC 3929215 Query 124549 TGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAA 124608 || || || | ||||||||||||||||| || ||||||| ||||| | ||||| Sbjct 3929216 AGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGAA 3929275 Query 124609 TACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCC 124668 ||||| ||||| | || || |||||||| |||||| |||||||| ||||| || Sbjct 3929276 AACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACC 3929335 Query 124669 TAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTG 124728 || | | | |||||||||| | ||||| || | | ||||| | |||||| Sbjct 3929336 CAAACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTG 3929395 Query 124729 GAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTC 124788 | || | | || ||||||||||||||| || |||||||||||||| | ||| ||||| Sbjct 3929396 TAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTTC 3929455 Query 124789 CCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGAT 124848 ||| |||||||| ||||| | |||||| || || | |||| || ||||||||||| Sbjct 3929456 CCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGAT 3929515 Query 124849 GATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGAC 124908 || ||||| ||||| | |||||||| | || || || | || || || ||||| || Sbjct 3929516 AATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTAC 3929575 Query 124909 AGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAA 124967 ||||| ||||| || || || | || || ||| | ||| || | |||| || | Sbjct 3929576 TGGAGGGGCTGCGATGAAGGCGATAATAAATACA-AAAGTTGCGGTCAATAAGGTAGGGA 3929634 Query 124968 TCATTAGAACACCAAACCAACCAACATAAA 124997 |||| | |||||| ||||| || | |||| Sbjct 3929635 TCATCAAAACACCGAACCATCCGATGTAAA 3929664 Score = 342 bits (378), Expect = 6e-89 Identities = 705/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 54998454 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 54998513 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 54998514 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 54998573 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || |||||||| || || | Sbjct 54998574 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACG 54998633 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| || || || || || | || |||| |||| | ||| |||| || || Sbjct 54998634 TAAGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGGAC 54998693 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | | |||||| ||||| || | |||||| || || || Sbjct 54998694 AAATAGCATAAAGAAATGTAACCAACGTTTGTTGGAAAAAGCAACACCAAAGATTTGGGA 54998753 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | || || || | ||| |||||||||||| | || || || | || || Sbjct 54998754 CCAAAAGCGATTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 54998813 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTC--ATACAAT 123283 | ||||| | | ||| ||| |||||| ||| | | Sbjct 54998814 GCGAAAAGTATTTGC---------ACCATCACC------------GTCTTCGAATAGAGT 54998852 Query 123284 GTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCA 123343 || |||| || || || |||||||| || ||||| | || | |||| || ||| ||| Sbjct 54998853 GTTTTCT--ACGGTCGCTCCATGAATAGCGCATAGGAGAGCCGCGCCTAATACTCCGGCA 54998910 Query 123344 ACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATA 123403 || |||||||| ||||| || ||||| || || || || ||||| | ||| | ||| Sbjct 54998911 ACTCCCATCATATGAAACGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATG 54998970 Query 123404 TAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGT 123463 | ||||| || ||||| || || || || || |||||||||| | || || ||| Sbjct 54998971 AATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGT 54999030 Query 123464 GGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTG 123523 ||||| || || || | | || || ||||| | ||||||||| || ||| || Sbjct 54999031 GGATAAATAAGGAATACAGAAACAAAAACAGCGATTGGACCAGAGAATGAGATTGCATTA 54999090 Query 123524 TAAGGTCTAA--TGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGA 123581 ||||| | | || || | | || | |||||||| | | |||||||||||| | Sbjct 54999091 TAAGGCCGCAATTGAATAGAC--CGAGCAAGTTCAAATTGGCGTAACATGAAACCTATTA 54999148 Query 123582 GTCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAA 123641 || |||| | || || | |||||||| ||||||| || || | ||| |||||||| Sbjct 54999149 GTGCAAAAGCCCCGTGGAGAGCTACAAAAGTCCATAGGCCACCTAATTGACACCAACGAG 54999208 Query 123642 CGAATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGC 123696 || |||||||||||| || ||||| || | || | || | || | | |||| Sbjct 54999209 TAAAATCTCCTTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG 54999268 Query 123697 GTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGC 123756 |||| || || |||||||| |||||||| || || || | ||| ||| || Sbjct 54999269 -----CAGGGGTAGAAACTGCTGCGGTTAAGAAATTACAACCTTCCAAATAGGAACTAGC 54999323 Query 123757 AATACCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGA 123816 | ||||| |||||||| || || || || || || ||| ||||| || || | | Sbjct 54999324 CAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCACCCTCCTAAAGC 54999383 Query 123817 TAGATACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCT 123876 | ||| |||||||| | || || | || |||||||||| || || ||||| || || Sbjct 54999384 GAAATAAGCACAAGGAAAGAGCAATAAGCCGGACCATCCTACAAAAACGAAACGGTCCCT 54999443 Query 123877 CTTTAACCAGTCGTCAAGAACATCAAA 123903 |||||||||||| | | |||||| Sbjct 54999444 TCGTAACCAGTCGTCCACAGTATCAAA 54999470 Score = 342 bits (378), Expect = 6e-89 Identities = 705/1047 (67%), Gaps = 39/1047 (4%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 74444247 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 74444188 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 74444187 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 74444128 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || |||||||| || || | Sbjct 74444127 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACG 74444068 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 | ||| || || || || || | || |||| |||| | ||| |||| || || Sbjct 74444067 TAAGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGGAC 74444008 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | | |||||| ||||| || | |||||| || || || Sbjct 74444007 AAATAGCATAAAGAAATGTAACCAACGTTTGTTGGAAAAAGCAACACCAAAGATTTGGGA 74443948 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | || || || | ||| |||||||||||| | || || || | || || Sbjct 74443947 CCAAAAGCGATTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 74443888 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTC--ATACAAT 123283 | ||||| | | ||| ||| |||||| ||| | | Sbjct 74443887 GCGAAAAGTATTTGC---------ACCATCACC------------GTCTTCGAATAGAGT 74443849 Query 123284 GTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCA 123343 || |||| || || || |||||||| || ||||| | || | |||| || ||| ||| Sbjct 74443848 GTTTTCT--ACGGTCGCTCCATGAATAGCGCATAGGAGAGCCGCGCCTAATACTCCGGCA 74443791 Query 123344 ACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATA 123403 || |||||||| ||||| || ||||| || || || || ||||| | ||| | ||| Sbjct 74443790 ACTCCCATCATATGAAACGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATG 74443731 Query 123404 TAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGT 123463 | ||||| || ||||| || || || || || |||||||||| | || || ||| Sbjct 74443730 AATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGT 74443671 Query 123464 GGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTG 123523 ||||| || || || | | || || ||||| | ||||||||| || ||| || Sbjct 74443670 GGATAAATAAGGAATACAGAAACAAAAACAGCGATTGGACCAGAGAATGAGATTGCATTA 74443611 Query 123524 TAAGGTCTAA--TGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGA 123581 ||||| | | || || | | || | |||||||| | | |||||||||||| | Sbjct 74443610 TAAGGCCGCAATTGAATAGAC--CGAGCAAGTTCAAATTGGCGTAACATGAAACCTATTA 74443553 Query 123582 GTCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAA 123641 || |||| | || || | |||||||| ||||||| || || | ||| |||||||| Sbjct 74443552 GTGCAAAAGCCCCGTGGAGAGCTACAAAAGTCCATAGGCCACCTAATTGACACCAACGAG 74443493 Query 123642 CGAATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGC 123696 || |||||||||||| || ||||| || | || | || | || | | |||| Sbjct 74443492 TAAAATCTCCTTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG 74443433 Query 123697 GTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGC 123756 |||| || || |||||||| |||||||| || || || | ||| ||| || Sbjct 74443432 -----CAGGGGTAGAAACTGCTGCGGTTAAGAAATTACAACCTTCCAAATAGGAACTAGC 74443378 Query 123757 AATACCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGA 123816 | ||||| |||||||| || || || || || || ||| ||||| || || | | Sbjct 74443377 CAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCACCCTCCTAAAGC 74443318 Query 123817 TAGATACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCT 123876 | ||| |||||||| | || || | || |||||||||| || || ||||| || || Sbjct 74443317 GAAATAAGCACAAGGAAAGAGCAATAAGCCGGACCATCCTACAAAAACGAAACGGTCCCT 74443258 Query 123877 CTTTAACCAGTCGTCAAGAACATCAAA 123903 |||||||||||| | | |||||| Sbjct 74443257 TCGTAACCAGTCGTCCACAGTATCAAA 74443231 >seq3 Length=59935730 Score = 208 bits (230), Expect = 9e-49 Identities = 310/440 (70%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 16822136 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 16822077 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 16822076 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 16822017 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||| ||||| || | ||||| | || || ||| Sbjct 16822016 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 16821957 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 16821956 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 16821897 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | || ||||| ||||| || || || || || || || || Sbjct 16821896 CTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTC 16821837 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| || || || ||||| | || || || | || || ||||| ||| Sbjct 16821836 TCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTG 16821777 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 16821776 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAACA 16821717 Query 124469 CCTGCTACTCCTGCCATGTG 124488 || ||||| ||| |||||| Sbjct 16821716 CCAGCTACACCTAACATGTG 16821697 >seq2 Length=59384932 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||||||||| | ||||||||| || || ||||| |||||||| |||||||| || Sbjct 48395241 ACACCAATAGGACCCATGCCAGGACCACCTCCACCATGAGGAATACAAAATGTCTTGTGA 48395182 Query 138243 AAATTTAGATGACATACATCTGCACCA 138269 | |||| ||| || |||||||| ||| Sbjct 48395181 AGGTTTAAATGGCAAACATCTGCTCCA 48395155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998197350560