Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq28 542 3e-149 seq4 536 1e-147 seq5 506 3e-138 seq1 441 9e-119 seq3 275 8e-69 >seq28 Length=135199 Score = 542 bits (600), Expect = 3e-149 Identities = 712/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| |||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 126 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 185 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| ||| ||| | ||| | | |||||| || ||| Sbjct 186 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 245 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || ||||| || ||||| || | |||||| | || ||| ||| Sbjct 246 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 305 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129 || | | ||| || || | | ||| | ||||||||| | | | | |||||| ||| Sbjct 306 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 365 Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189 | | ||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 366 CTA-GCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGT 424 Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249 |||||| ||||||||||| || ||||| | || ||| || | |||||| || || || Sbjct 425 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 484 Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309 ||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 485 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAAC 544 Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369 ||| ||||| ||| ||| || || ||||||||||| ||||| ||||| || |||||||| Sbjct 545 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCTGGAATAC 604 Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429 | ||| ||||| || |||||||| || |||| |||||| ||||||||||| || || Sbjct 605 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTG 664 Query 8430 ACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTAC 8489 ||||| || || | ||||| || || ||||| | || ||||| |||||| || Sbjct 665 ACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAAC 724 Query 8490 ACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGC 8549 | ||||| || | |||||| || ||| | | ||||||| | |||||| ||| Sbjct 725 AGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACA 784 Query 8550 AGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCA 8609 || | |||| | |||||| | | || | || ||| ||||| || || || ||||| Sbjct 785 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 844 Query 8610 CTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGA 8669 ||||| | | |||||||||||||| || || ||||| ||||| || || |||| Sbjct 845 TTCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGT 904 Query 8670 TGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTC 8729 |||| | |||||||||||| || ||||||||||| | || ||||| | |||||| || Sbjct 905 AGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTC 964 Query 8730 ACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGC 8789 |||||||| || ||||| || || || || || || || || | ||||| || || Sbjct 965 GCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGAAGT 1024 Query 8790 AGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTT 8849 || | || ||| ||| ||||| | ||| || ||||| |||| ||||| | || | Sbjct 1025 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTC 1084 Query 8850 TGTACTTGTAACCCACTCGCAAAA 8873 || || || | ||| | ||| || Sbjct 1085 AGTGCTAGTTATCCAGTTGCAGAA 1108 >seq4 Length=48772488 Score = 536 bits (594), Expect = 1e-147 Identities = 711/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| |||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 22676632 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 22676573 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| ||| ||| | ||| | | |||||| || ||| Sbjct 22676572 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 22676513 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || ||||| || ||||| || | |||||| | || ||| ||| Sbjct 22676512 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 22676453 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129 || | | ||| || || | | ||| | ||||||||| | | | | |||||| ||| Sbjct 22676452 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 22676393 Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189 | | ||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 22676392 CTA-GCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGT 22676334 Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249 |||||| ||||||||||| || ||||| | || ||| || | |||||| || || || Sbjct 22676333 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 22676274 Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309 ||| | | ||| || || || ||||| |||||||||||||| || || || || || | Sbjct 22676273 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCAAAAAC 22676214 Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369 ||| ||||| ||| ||| || || ||||||||||| ||||| |||||||| |||||||| Sbjct 22676213 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATAC 22676154 Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429 | ||| ||||| || |||||||| || |||| |||||| ||||||||||| || || Sbjct 22676153 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTG 22676094 Query 8430 ACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTAC 8489 ||||| || || | ||||| || || ||||| | || ||||| |||||| || Sbjct 22676093 ACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAAC 22676034 Query 8490 ACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGC 8549 | ||||| || | |||||| || ||| | | ||||||| | |||||| ||| Sbjct 22676033 AGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCATATAACA 22675974 Query 8550 AGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCA 8609 || | |||| | |||||| | | || | || ||| ||||| || || || ||||| Sbjct 22675973 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 22675914 Query 8610 CTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGA 8669 ||||| | | |||||||||||||| || || ||||| ||||| || || |||| Sbjct 22675913 TTCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCGCAGAAGT 22675854 Query 8670 TGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTC 8729 |||| | |||||||||||| || ||||||||||| | || ||||| | || ||| || Sbjct 22675853 AGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAATAGGCTC 22675794 Query 8730 ACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGC 8789 |||||||| || ||||| || || || || || || || || | ||||| || || Sbjct 22675793 GCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGAAGT 22675734 Query 8790 AGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTT 8849 || | || ||| ||| ||||| | ||| || ||||| |||| ||||| | || | Sbjct 22675733 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTC 22675674 Query 8850 TGTACTTGTAACCCACTCGCAAAA 8873 || || || | ||| | ||| || Sbjct 22675673 AGTGCTAGTTATCCAGTTGCAGAA 22675650 Score = 100 bits (110), Expect = 4e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 8042 CCATTGTGCAAATACCCATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGA 8101 |||| || | |||||| | | ||| ||||| | | ||| | || | | ||| | || Sbjct 45406998 CCATAGTACTAATACCTAAATCAGTGAACCAGATTCCTACTGCAGGCCAAGCAGCCAAGA 45407057 Query 8102 AGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAG 8160 | ||||| | | | || ||| |||| | ||||| ||||||||||||| ||||| Sbjct 45407058 AAAAGTGTAAAGAAGGAGAGTCGTTGAAACTA-GCATATTGGAAGATTAATCGGCCAAAA 45407116 Query 8161 TATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAG 8220 || ||||||||| ||||||||||| |||||||| ||||||||||| || ||||| | | Sbjct 45407117 TAAATATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCG 45407176 Query 8221 TT 8222 || Sbjct 45407177 TT 45407178 >seq5 Length=28563423 Score = 506 bits (560), Expect = 3e-138 Identities = 707/985 (72%), Gaps = 5/985 (1%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| |||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 14558567 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 14558626 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| ||| ||| | ||| | | |||||| || ||| Sbjct 14558627 GCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTACAGAT 14558686 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || ||||| || |||| || | |||||| | || ||| ||| Sbjct 14558687 TGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGTGAAC 14558746 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCT-ACTGTTGTT-AA 8128 || | | ||| || || | | ||| | ||||||||| | | | | |||||| || Sbjct 14558747 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAGAGAGTTGTTGAA 14558806 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 || | ||||| ||||||||||||| ||||| || |||||||| || ||||||||||| | Sbjct 14558807 ACTA-GCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTATAAG 14558865 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 ||||||| ||||||||||| || ||||| | || ||| || | |||||| || || | Sbjct 14558866 TCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCC 14558925 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308 |||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 14558926 TGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAA 14558985 Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368 ||| ||||| ||| ||| | |||| |||||||||| ||||| |||||||| ||||||| Sbjct 14558986 CACCAGCTACACCTAACATGT-GAAATGATGCATAAGGATGTTGTGCTCTGCCTGGAATA 14559044 Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428 | | ||| ||||| || |||||||| || |||| |||||| ||||||||||| || | Sbjct 14559045 CAATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTT 14559104 Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488 |||||| || || | ||||| || || ||||| | || ||||| |||||| | Sbjct 14559105 GACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAA 14559164 Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548 || ||||| || |||||| || ||| | | ||||||| | |||||| ||| Sbjct 14559165 CAACAATCCAAGGGTGCATACC-AAACGGAAACTAAGTTCCCACTCACGACCCATATAAC 14559223 Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608 || | |||| | |||||| | | || | || ||| ||||| || || || || | Sbjct 14559224 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAATC 14559283 Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668 | ||||| | | |||||||| ||||| || || ||||| ||||| || || |||| Sbjct 14559284 ATTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAG 14559343 Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728 |||| | |||||||||||| || ||||||||||| | || ||||| | |||||| | Sbjct 14559344 TAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCT 14559403 Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788 | |||||||| || ||||| || || || || || || || || | ||||| || || Sbjct 14559404 CGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATACAGAAG 14559463 Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848 || | || ||| ||| ||||| | ||| || ||||| | || ||||| | || | Sbjct 14559464 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCTGATGTAAAGACGATTTT 14559523 Query 8849 TTGTACTTGTAACCCACTCGCAAAA 8873 || || || | ||| | ||| || Sbjct 14559524 CAGTGCTAGTTATCCAGTTGCAGAA 14559548 >seq1 Length=75119905 Score = 441 bits (488), Expect = 9e-119 Identities = 568/781 (73%), Gaps = 2/781 (0%) Strand=Plus/Plus Query 8094 AGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATC 8152 ||| | ||||||||| | | | | |||||| |||| | ||||| ||||||||||||| Sbjct 3928919 AGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTA-GCATATTGGAAGATTAATC 3928977 Query 8153 TACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTAT 8212 ||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| || | Sbjct 3928978 GGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGT 3929037 Query 8213 AACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAG 8272 |||| | || ||| || | |||||| || || ||||| | | ||| || || || | Sbjct 3929038 AACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGTTACCAAGG 3929097 Query 8273 AACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACCCCTGCCATATGGA 8332 |||| |||||||||||||| || || || ||||| | ||| ||||| ||| ||| || | Sbjct 3929098 AACCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGTGAA 3929157 Query 8333 AAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAG 8392 | ||||||||||| ||||| |||||||| |||||||| | ||| ||||| || ||||||| Sbjct 3929158 ATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAG 3929217 Query 8393 AAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAACA 8452 | || |||| |||||| ||||||||||| || ||||||| || || | ||||| | Sbjct 3929218 ATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGAAAA 3929277 Query 8453 CTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACCTA 8512 | || ||||| | || ||||| |||||| ||| ||||| || | |||||| | Sbjct 3929278 CAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCCA 3929337 Query 8513 AGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGA 8572 | ||| | | ||||||| | |||||| ||| || | |||| | |||||| | Sbjct 3929338 AACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTA 3929397 Query 8573 AGATAACCAACTGATATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCC 8632 | || | || ||| ||||| || || || ||||| ||||| | | |||||||||| Sbjct 3929398 GAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTTCCC 3929457 Query 8633 AAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGA 8692 |||| || || ||||| ||||| || || |||| |||| | |||||||||||| | Sbjct 3929458 AAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGATAA 3929517 Query 8693 TGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAG 8752 | ||||||||||| | || ||||| | |||||| || |||||||| || ||||| || | Sbjct 3929518 TATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACTG 3929577 Query 8753 GTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCA 8812 | || || || || || || | ||||| | || || | || ||| ||| |||| Sbjct 3929578 GAGGGGCTGCGATGAAGGCGATAATAAATACAAAAGTTGCGGTCAATAAGGTAGGGATCA 3929637 Query 8813 TTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAA 8872 | | ||| || ||||| |||| ||||| | || | || || || | ||| | ||| | Sbjct 3929638 TCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTTATCCAGTTGCAGA 3929697 Query 8873 A 8873 | Sbjct 3929698 A 3929698 >seq3 Length=59935730 Score = 275 bits (304), Expect = 8e-69 Identities = 327/441 (74%), Gaps = 2/441 (0%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| |||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 16822136 GCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 16822077 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| ||| ||| | ||| | | |||||| || ||| Sbjct 16822076 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 16822017 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || ||||| || ||||| || | |||||| | || ||| ||| Sbjct 16822016 TGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGTGAAC 16821957 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129 || | | ||| || || | | ||| | ||||||||| | | | | |||||| ||| Sbjct 16821956 CAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 16821897 Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189 | | ||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 16821896 CTA-GCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGT 16821838 Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249 |||||| ||||||||||| || ||||| | || ||| || | |||||| || || || Sbjct 16821837 CTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCT 16821778 Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309 ||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 16821777 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAAAC 16821718 Query 8310 ACCTGCTACCCCTGCCATATG 8330 ||| ||||| ||| ||| || Sbjct 16821717 ACCAGCTACACCTAACATGTG 16821697 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 8692 ATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACA 8751 || ||||||||||| | || ||||| | |||||| || |||||||| || ||||| || Sbjct 15391200 ATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACT 15391259 Query 8752 GGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATC 8811 || || || || || || || | ||||| || || || | || ||| ||| ||| Sbjct 15391260 GGAGGGGCTGCGATTAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATC 15391319 Query 8812 ATTAGAACTCCAAACCAACCGACATAAAG 8840 || | ||| |||||||| |||| ||||| Sbjct 15391320 ATCAAAACACCAAACCATCCGATGTAAAG 15391348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615862184448160