Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq28 513 4e-141 seq4 513 4e-141 seq5 468 1e-127 seq1 405 1e-108 seq3 242 1e-59 >seq28 Length=135199 Score = 513 bits (568), Expect = 4e-141 Identities = 693/963 (72%), Gaps = 2/963 (0%) Strand=Plus/Minus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | || |||||||| | ||||||||||| || | ||||| || | ||| ||| | Sbjct 1087 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC-TACCTTATTGAC 1029 Query 41314 CGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAAT 41373 ||| || || |||||||||||||| | | || || || || || || ||||| || Sbjct 1028 CGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTAT 969 Query 41374 CCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGT 41433 || || || || |||| || | | ||||| ||||| || || || || || | | Sbjct 968 TCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTAT 909 Query 41434 TCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGA 41493 ||| | | || |||||| | ||||| |||||||||||||||||||| | |||| Sbjct 908 TCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGA 849 Query 41494 TGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGT 41553 ||||||| | ||||| || ||||| | | || | || | |||||| | |||| || Sbjct 848 TGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 789 Query 41554 CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 | ||| ||||| || |||||||||||||| | || | || ||| | || ||||| Sbjct 788 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 729 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTT 41673 |||||| || || |||||||| || |||||||||||||| ||| | |||| || | Sbjct 728 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 669 Query 41674 TGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACAT 41733 ||| || || || ||||||| |||||| || || ||||| || || ||||||| || Sbjct 668 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 609 Query 41734 GCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGC 41793 | | || |||||||| |||||||| || ||||||||||| ||||||||| | ||||| || Sbjct 608 GATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 549 Query 41794 CGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACT 41853 || || || || || | ||| ||||||||| ||| | |||| || || | Sbjct 548 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 489 Query 41854 CATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGA 41913 || | || || |||||| | | || || | |||||||| |||||||||||||| Sbjct 488 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 429 Query 41914 AGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGC 41973 ||||||||| |||||||| |||||||| || |||||||| || | |||||||||||||| Sbjct 428 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 369 Query 41974 TAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTAT 42033 ||| || || || || ||| | | || ||||| | ||||| |||||||| ||||| || Sbjct 368 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAAT 309 Query 42034 TTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAA 42093 ||||| |||| | || | ||| ||||| |||||| | ||||| ||||| || || Sbjct 308 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAA 249 Query 42094 CCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCG 42153 ||||||| | | | | | | || | || || || || |||||||| || | ||||| Sbjct 248 CCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 189 Query 42154 TGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCT 42213 ||| || ||||| | || || ||||| || || || || ||||||||||| || || || Sbjct 188 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 129 Query 42214 TGC 42216 || Sbjct 128 AGC 126 >seq4 Length=48772488 Score = 513 bits (568), Expect = 4e-141 Identities = 693/963 (72%), Gaps = 2/963 (0%) Strand=Plus/Plus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | || |||||||| | ||||||||||| || | |||| ||| | ||| ||| | Sbjct 22675671 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGA-TCCCTACCTTATTGAC 22675729 Query 41314 CGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAAT 41373 ||| || || |||||||||||||| | | || || || || || || ||||| || Sbjct 22675730 CGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTAT 22675789 Query 41374 CCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGT 41433 || || || | |||| || | | ||||| ||||| || || || || || | | Sbjct 22675790 TCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTAT 22675849 Query 41434 TCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGA 41493 ||| | | || |||||| | ||||| |||||||||||||||||||| | |||| Sbjct 22675850 TCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTTGGGAAGCTGCATCCGTTGA 22675909 Query 41494 TGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGT 41553 ||||||| | ||||| || ||||| | | || | || | |||||| | |||| || Sbjct 22675910 TGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 22675969 Query 41554 CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 | ||| ||||| || |||||||||||||| | || | || ||| | || ||||| Sbjct 22675970 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGAT 22676029 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTT 41673 |||||| || || |||||||| || |||||||||||||| ||| | |||| || | Sbjct 22676030 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 22676089 Query 41674 TGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACAT 41733 ||| || || || ||||||| |||||| || || ||||| || || ||||||| || Sbjct 22676090 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 22676149 Query 41734 GCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGC 41793 | | || |||||||| |||||||| || ||||||||||| ||||||||| | ||||| || Sbjct 22676150 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 22676209 Query 41794 CGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACT 41853 || || ||||| || | ||| ||||||||| ||| | |||| || || | Sbjct 22676210 TGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 22676269 Query 41854 CATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGA 41913 || | || || |||||| | | || || | |||||||| |||||||||||||| Sbjct 22676270 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 22676329 Query 41914 AGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGC 41973 ||||||||| |||||||| |||||||| || |||||||| || | |||||||||||||| Sbjct 22676330 AGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 22676389 Query 41974 TAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTAT 42033 ||| || || || || ||| | | || ||||| | ||||| |||||||| ||||| || Sbjct 22676390 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAAT 22676449 Query 42034 TTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAA 42093 ||||| |||| | || | ||| ||||| |||||| | ||||| ||||| || || Sbjct 22676450 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTAAATGGATTCAATTTCAA 22676509 Query 42094 CCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCG 42153 ||||||| | | | | | | || | || || || || |||||||| || | ||||| Sbjct 22676510 CCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 22676569 Query 42154 TGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCT 42213 ||| || ||||| | || || ||||| || || || || ||||||||||| || || || Sbjct 22676570 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 22676629 Query 42214 TGC 42216 || Sbjct 22676630 AGC 22676632 Score = 131 bits (144), Expect = 5e-26 Identities = 124/156 (79%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 41885 AACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGC 41944 ||| | |||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 41945 TATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTC 42004 |||||||| || | ||||||||||||||||| || || | || | | | | || || Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTT- 45407060 Query 42005 TTTCTT-GCTGCCTGGCCTGTTGTAGGTATTTGGTT 42039 |||||| ||||| ||||||| ||||| || ||||| Sbjct 45407059 TTTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTT 45407024 >seq5 Length=28563423 Score = 468 bits (518), Expect = 1e-127 Identities = 686/964 (71%), Gaps = 5/964 (1%) Strand=Plus/Minus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | || |||||||| | |||||||||| || | ||||| || | ||| ||| | Sbjct 14559527 ACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCCC-TACCTTATTGAC 14559469 Query 41314 CGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAAT 41373 ||| || || |||||||||||||| | | || || || || || || ||||| || Sbjct 14559468 CGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTAT 14559409 Query 41374 CCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGT 41433 || || || || |||| || | | ||||| ||||| || || || || || | | Sbjct 14559408 TCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTAT 14559349 Query 41434 TCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGA 41493 ||| | | || |||||| | ||||| ||||||||||| |||||||| | |||| Sbjct 14559348 TCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGAGAAGCTGCATCCGTTGA 14559289 Query 41494 TGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGT 41553 |||||| | ||||| || ||||| | | || | || | |||||| | |||| || Sbjct 14559288 TGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 14559229 Query 41554 CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 | ||| ||||| || |||||||||||||| | || | || ||| || ||||| Sbjct 14559228 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTT-GGTATGCACCCTTGGAT 14559170 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTT 41673 ||||||| || || |||||||| || |||||||||||||| ||| | |||| || | Sbjct 14559169 TGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTAT 14559110 Query 41674 TGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACAT 41733 ||| || || || ||||||| |||||| || || ||||| || || || |||| || Sbjct 14559109 TGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTAAACTTTAT 14559050 Query 41734 GCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGC 41793 | | || |||||||| |||||||| || ||||||||| | ||||||||| | ||||| || Sbjct 14559049 GATTGTATTCCAGGCAGAGCACAACATCCTTATGCAT-CATTTCACATGTTAGGTGTAGC 14558991 Query 41794 CGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACT 41853 || || || || || | ||| ||||||||| ||| | |||| || || | Sbjct 14558990 TGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 14558931 Query 41854 CATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGA 41913 || | || || |||||| | | || || | |||||||| |||||||||||||| Sbjct 14558930 GATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 14558871 Query 41914 AGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGC 41973 ||||||||| |||||||| || ||||| || |||||||| || | |||||||||||||| Sbjct 14558870 AGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 14558811 Query 41974 TAGCTTTAATAATTC-CCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTA 42032 ||| || || || || | || | | || ||||| | ||||| |||||||| ||||| | Sbjct 14558810 TAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAA 14558751 Query 42033 TTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTA 42092 | ||||| |||| | || | ||| |||| |||||| | ||||| ||||| || | Sbjct 14558750 TCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGGATTCAATTTCA 14558691 Query 42093 ACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACC 42152 |||||||| | | | | | | || | || || || || |||||||| || | |||| Sbjct 14558690 ACCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGATATCATCAACC 14558631 Query 42153 GTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACC 42212 |||| || ||||| | || || ||||| || || || || ||||||||||| || || | Sbjct 14558630 GTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATC 14558571 Query 42213 TTGC 42216 | || Sbjct 14558570 TAGC 14558567 >seq1 Length=75119905 Score = 405 bits (448), Expect = 1e-108 Identities = 549/759 (72%), Gaps = 5/759 (1%) Strand=Plus/Minus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | || |||||||| | ||||||||||| || | ||||| || | ||| ||| | Sbjct 3929677 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC-TACCTTATTGAC 3929619 Query 41314 CGCTACAACTTGT-TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAA 41372 ||| || |||| |||||||||||||| | | || || || || || || ||||| | Sbjct 3929618 CGCAACTT-TTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTA 3929560 Query 41373 TCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCG 41432 | || || || || |||| || | | ||||| ||||| || || || || || | Sbjct 3929559 TTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTA 3929500 Query 41433 TTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTG 41492 |||| | | || |||||| | ||||| |||||||||||||||||||| | ||| Sbjct 3929499 TTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTG 3929440 Query 41493 ATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCG 41552 |||||||| | ||||| || ||||| | | || | || | |||||| | |||| | Sbjct 3929439 ATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 3929380 Query 41553 TCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGA 41612 | | ||| ||||| || |||||||||||||| | || | || ||| | || |||| Sbjct 3929379 TAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGA 3929320 Query 41613 TCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGT 41672 | |||||| || || |||||||| || |||||||||||||| ||| | |||| || Sbjct 3929319 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTA 3929260 Query 41673 TTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACA 41732 |||| || || || ||||||| |||||| || || ||||| || || ||||||| | Sbjct 3929259 TTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTA 3929200 Query 41733 TGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGG 41792 || | || |||||||| |||||||| || ||||||||||| ||||||||| | ||||| | Sbjct 3929199 TGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAG 3929140 Query 41793 CCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCAC 41852 | || || || || || | ||| ||||||||| ||| | |||| || || Sbjct 3929139 CTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTT 3929080 Query 41853 TCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGG 41912 | || | || || |||||| | | || || | |||||||| ||||||||||||| Sbjct 3929079 TGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGG 3929020 Query 41913 AAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATG 41972 |||||||||| |||||||| |||||||| || |||||||| || | ||||||||||||| Sbjct 3929019 AAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATG 3928960 Query 41973 CTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTG 42011 |||| || || || || ||| | | || ||| |||||| Sbjct 3928959 CTAGTTTCAACAACTCTCGTTCTTTACACTTC-TTCTTG 3928922 >seq3 Length=59935730 Score = 242 bits (268), Expect = 1e-59 Identities = 319/442 (72%), Gaps = 0/442 (0%) Strand=Plus/Plus Query 41775 TTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTA 41834 |||||||| | ||||| || || || || || || | ||| ||||||||| ||| Sbjct 16821695 TTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTT 16821754 Query 41835 GCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTT 41894 | |||| || || | || | || || |||||| | | || || | |||| Sbjct 16821755 CCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTT 16821814 Query 41895 ACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTC 41954 |||| ||||||||||||||||||||||| |||||||| |||||||| || |||||||| | Sbjct 16821815 ACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCC 16821874 Query 41955 GGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTG 42014 | | ||||||||||||||||| || || || || ||| | | || ||||| | |||| Sbjct 16821875 GATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTG 16821934 Query 42015 CCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACT 42074 | |||||||| ||||| || ||||| |||| | || | ||| ||||| |||||| Sbjct 16821935 CTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACC 16821994 Query 42075 TGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCT 42134 | ||||| ||||| || ||||||||| | | | | | | || | || || || || | Sbjct 16821995 TAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTT 16822054 Query 42135 GGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCAC 42194 ||||||| || | |||||||| || ||||| | || || ||||| || || || || | Sbjct 16822055 GGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTC 16822114 Query 42195 ACAACTTCCCGCTTGACCTTGC 42216 |||||||||| || || || || Sbjct 16822115 ACAACTTCCCTCTAGATCTAGC 16822136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146214351383712