Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq4 547 2e-151 seq28 542 8e-150 seq5 515 1e-141 seq1 399 6e-107 seq3 269 8e-68 >seq4 Length=48772488 Score = 547 bits (606), Expect = 2e-151 Identities = 723/995 (73%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| ||| | || |||||||| | || ||||| Sbjct 22675641 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTC 22675700 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| |||| |||| Sbjct 22675701 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCA 22675758 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 | || |||||||| ||||| |||||||| ||||| || ||| | ||||| ||| | || | Sbjct 22675759 TCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTT 22675818 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || ||||||||||| | | |||| | ||||| ||| | || | Sbjct 22675819 ATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACT 22675878 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 |||| | || |||||||| || |||| |||||| | |||||||| || |||||| Sbjct 22675879 TGTACCCAATTTGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 22675938 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 |||| | || | |||||| | | ||| | | ||| |||| || || ||||||| Sbjct 22675939 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 22675998 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| | || ||| | || ||||| |||||| || || || ||||| || | Sbjct 22675999 TTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 22676058 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | |||||||| || ||| | | || || |||| ||||| || || ||||| |||| Sbjct 22676059 CTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGC 22676118 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 || | || || || ||||| |||||||| ||| | || |||||||| || || ||||| | Sbjct 22676119 CTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCC 22676178 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 |||||||||| || || ||| | ||||| || || || ||||| || || | ||| | Sbjct 22676179 TTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTG 22676238 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || |||||| | | | | ||||| |||||||| ||| Sbjct 22676239 CTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTG 22676298 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || ||||| || ||||||||||| ||||||||||| ||||| || || |||| Sbjct 22676299 CTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATG 22676358 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || || ||| ||||| ||| Sbjct 22676359 GTTATTTTGGCCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACAC 22676417 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 ||||| | || |||||||| || || || || ||||||||| || | || | |||||| Sbjct 22676418 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACT 22676477 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 |||||||| ||| | ||||| || || || |||||||| | ||||||| ||| || Sbjct 22676478 ATGGCGTTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGC 22676537 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||||||||||||||| | || ||||| || ||||| | || || |||||| Sbjct 22676538 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 22676597 Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || || ||||| || |||||||| || ||||| || Sbjct 22676598 GAACGTAATGCTCACAACTTCCCTCTAGATCTAGC 22676632 Score = 116 bits (128), Expect = 1e-21 Identities = 135/177 (76%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 42946 GGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTT 43005 || ||||| || ||||||||||| ||||||||||| ||||| || || ||| ||| ||| Sbjct 45407172 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATTTATTTT 45407113 Query 43006 GGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCT 43064 || || | |||||||||||||| | |||| || | || ||||| ||||| ||||| Sbjct 45407112 GGCCGATTAATCTTCCAATATGC-TAGTTTCAACGACTCTCCTTCTTTACACTT-TTTCT 45407055 Query 43065 T-GCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGG 43120 | || |||||||| | || || || ||||||||| | | || | |||||||||| Sbjct 45407054 TGGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTGATTTAGGTATTAGTACTATGG 45406998 >seq28 Length=135199 Score = 542 bits (600), Expect = 8e-150 Identities = 722/995 (73%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| ||| | || |||||||| | || ||||| Sbjct 1117 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTC 1058 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| |||| |||| Sbjct 1057 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCA 1000 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| ||| | || | Sbjct 999 TCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTT 940 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || ||||||||||| | | |||| | ||||| ||| | || | Sbjct 939 ATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACT 880 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || | || |||||||| || |||| |||||| | |||||||| || |||||| Sbjct 879 TTTACCCAATTTGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 820 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 |||| | || | |||||| | | ||| | | ||| |||| || || ||||||| Sbjct 819 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 760 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| | || ||| | || ||||| |||||| || || || ||||| || | Sbjct 759 TTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 700 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | |||||||| || ||| | | || || |||| ||||| || || ||||| |||| Sbjct 699 CTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGC 640 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 || | || || || ||||| |||||||| ||| | || |||||||| || || ||||| | Sbjct 639 CTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCC 580 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 |||||||||| || || ||| | ||||| || || || || || || || | ||| | Sbjct 579 TTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTG 520 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || |||||| | | | | ||||| |||||||| ||| Sbjct 519 CTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTG 460 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || ||||| || ||||||||||| ||||||||||| ||||| || || |||| Sbjct 459 CTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATG 400 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || || ||| ||||| ||| Sbjct 399 GTTATTTTGGCCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACAC 341 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 ||||| | || |||||||| || || || || ||||||||| || | || | |||||| Sbjct 340 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACT 281 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 |||||||| ||| | ||||| || || || |||||||| | ||||||| ||| || Sbjct 280 ATGGCGTTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGC 221 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||||||||||||||| | || ||||| || ||||| | || || |||||| Sbjct 220 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 161 Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || || ||||| || |||||||| || ||||| || Sbjct 160 GAACGTAATGCTCACAACTTCCCTCTAGATCTAGC 126 >seq5 Length=28563423 Score = 515 bits (570), Expect = 1e-141 Identities = 719/996 (72%), Gaps = 9/996 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| ||| | || |||||||| | | ||||| Sbjct 14559557 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTC 14559498 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| |||| |||| Sbjct 14559497 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCA 14559440 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| ||| | || | Sbjct 14559439 TCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTT 14559380 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || ||||||||||| | | |||| | ||||| ||| | || | Sbjct 14559379 ATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACT 14559320 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || | || || ||||| || |||| ||||| | |||||||| || |||||| Sbjct 14559319 TTTACCCAATTTGAGAAGCTGCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATG 14559260 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 |||| | || | |||||| | | ||| | | ||| |||| || || ||||||| Sbjct 14559259 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 14559200 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| |||| ||| || ||||| ||||||| || || || ||||| || | Sbjct 14559199 TTAGTTTCCGT-TTGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAG 14559141 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | |||||||| || ||| | | || || |||| ||||| || || ||||| |||| Sbjct 14559140 CTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGC 14559081 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 || | || || || ||||| || ||||| ||| | || |||||||| || || ||||| | Sbjct 14559080 CTTTAGGAATATCTGGTACTTTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCC 14559021 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||||| |||| | ||| | ||||| || || || || || || || | ||| | Sbjct 14559020 TTATGCATCATTTC-ACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTG 14558962 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || |||||| | | | | ||||| |||||||| ||| Sbjct 14558961 CTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTG 14558902 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || ||||| || ||||||||||| ||||||||||| ||||| || || |||| Sbjct 14558901 CTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATG 14558842 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTC-GCTCTTTGCA 43055 |||| ||||| || | |||||||||||||| | |||| || || || | ||||| || Sbjct 14558841 GTTATTTTGGCCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCTGTTCTTTACA 14558783 Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTAC 43115 |||||| | || |||||||| || || || || ||||||||| || | || | ||||| Sbjct 14558782 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTAC 14558723 Query 43116 TATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCA 43175 ||||| ||| ||| | ||||| || || || |||||||| | ||||||| ||| || Sbjct 14558722 TATGGGGTTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCG 14558663 Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235 ||| || ||||||||||||||| | || ||||| || ||||| | || || ||||| Sbjct 14558662 TGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCA 14558603 Query 43236 CGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||| || ||||| || |||||||| || ||||| || Sbjct 14558602 CGAACGTAATGCTCACAACTTCCCTCTAGATCTAGC 14558567 >seq1 Length=75119905 Score = 399 bits (442), Expect = 6e-107 Identities = 568/790 (72%), Gaps = 7/790 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| ||| | || |||||||| | || ||||| Sbjct 3929707 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTC 3929648 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || ||| |||||| |||| |||| Sbjct 3929647 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTT-TGTATTTATTATCGCCTTCA 3929590 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| ||| | || | Sbjct 3929589 TCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTT 3929530 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || ||||||||||| | | |||| | ||||| ||| | || | Sbjct 3929529 ATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACT 3929470 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || | || |||||||| || |||| |||||| | |||||||| || |||||| Sbjct 3929469 TTTACCCAATTTGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 3929410 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 |||| | || | |||||| | | ||| | | ||| |||| || || ||||||| Sbjct 3929409 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 3929350 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| | || ||| | || ||||| |||||| || || || ||||| || | Sbjct 3929349 TTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 3929290 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | |||||||| || ||| | | || || |||| ||||| || || ||||| |||| Sbjct 3929289 CTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGC 3929230 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 || | || || || ||||| |||||||| ||| | || |||||||| || || ||||| | Sbjct 3929229 CTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCC 3929170 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 |||||||||| || || ||| | ||||| || || || || || || || | ||| | Sbjct 3929169 TTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTG 3929110 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || |||||| | | | | ||||| |||||||| ||| Sbjct 3929109 CTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTG 3929050 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || ||||| || ||||||||||| ||||||||||| ||||| || || |||| Sbjct 3929049 CTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATG 3928990 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || || ||| ||||| ||| Sbjct 3928989 GTTATTTTGGCCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACAC 3928931 Query 43057 TTCTTTCTTG 43066 ||| |||||| Sbjct 3928930 TTC-TTCTTG 3928922 >seq3 Length=59935730 Score = 269 bits (298), Expect = 8e-68 Identities = 326/441 (74%), Gaps = 2/441 (0%) Strand=Plus/Plus Query 42832 CATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGT 42891 || ||| | ||||| || || || || || || || | ||| |||||||||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 42892 CTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTAC 42951 | || |||||| | | | | ||||| |||||||| ||| ||| | || ||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 42952 AAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGG 43011 || || ||||||||||| ||||||||||| ||||| || || |||||||| ||||| || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 43012 CTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGC 43070 | |||||||||||||| | |||| || || ||| ||||| |||||||| | || || Sbjct 16821877 TTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 16821935 Query 43071 TTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTT 43130 |||||| || || || || ||||||||| || | || | |||||||||||||| ||| | Sbjct 16821936 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 16821995 Query 43131 GAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTG 43190 ||||| || || || |||||||| | ||||||| ||| || || || |||||| Sbjct 16821996 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 16822055 Query 43191 GGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACA 43250 ||||||||| | || ||||| || ||||| | || || |||||||| || ||||| || Sbjct 16822056 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 16822115 Query 43251 TAACTTCCCGCTTGATCTTGC 43271 |||||||| || ||||| || Sbjct 16822116 CAACTTCCCTCTAGATCTAGC 16822136 Score = 109 bits (120), Expect = 2e-19 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| ||| | || | |||||| | || |||||| Sbjct 15391390 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCATCTTTACATCGGATGGTTT 15391331 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| |||||| ||||| || | | | || | | |||| |||||| |||| || | Sbjct 15391330 GGTGTTTTGATGA-TCCCTACCTTATTGACCGC-AACTTCTGTATTTATTATCGCCTTAA 15391273 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| ||| | || | Sbjct 15391272 TCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTT 15391213 Query 42458 ATGGCAACAACAT 42470 |||| ||||| || Sbjct 15391212 ATGGAAACAATAT 15391200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143532752275344