Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq28 628 3e-175 seq4 623 1e-173 seq5 592 2e-164 seq1 480 9e-131 seq3 307 1e-78 >seq28 Length=135199 Score = 628 bits (696), Expect = 3e-175 Identities = 736/992 (74%), Gaps = 12/992 (1%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| || || | || |||| |||||||||||| | | Sbjct 1107 TCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGA 1048 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| |||||||||| || || |||| Sbjct 1047 TGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTC 988 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||| || || || ||||||||||| | ||||| ||||| | Sbjct 987 CAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 928 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | |||||||||||| || | |||| ||| ||||| || | ||||| || || |||| Sbjct 927 TTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTT 868 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||| ||| | ||||||| ||||| |||||||||||||||| | || | || Sbjct 867 GGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTC 808 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 807 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 751 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 || | || ||||| |||||||| ||||||||| || || || || | |||||| | Sbjct 750 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 691 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | |||| ||| | |||||||| |||||||||| |||||| | || | Sbjct 690 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAA 631 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| |||| | || ||||| || || ||||| ||||||||||| | Sbjct 630 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATC 571 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| | Sbjct 570 CATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATG 511 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| | ||| | ||||||||||| | || ||| || | | Sbjct 510 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 451 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 ||||||| || || ||||| ||||| |||||||| ||||| ||||||||||| || || | Sbjct 450 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 391 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTG 155746 | || | |||||||| ||||| ||||||||||| | | | ||||||||| | | Sbjct 390 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 331 Query 155747 CTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCA 155806 |||| |||||||| || | |||||| |||||| | ||| | || ||||| |||| Sbjct 330 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCA 271 Query 155807 ACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCC 155863 |||| || || ||||| |||||||| |||||||| || |||| ||| || || Sbjct 270 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGA---TAGTCAAGGTCGCGTTATTA 214 Query 155864 CTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTA 155923 ||| ||||| || || | ||||| ||| |||||||||||||||||||||||| |||| Sbjct 213 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 154 Query 155924 ACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 | ||||||||||||||||| || || |||||| Sbjct 153 ATGCTCACAACTTCCCTCTAGATCTAGCTGCT 122 >seq4 Length=48772488 Score = 623 bits (690), Expect = 1e-173 Identities = 735/992 (74%), Gaps = 12/992 (1%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| || || | || |||| |||||||||||| | | Sbjct 22675651 TCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGA 22675710 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| |||||||||| || || |||| Sbjct 22675711 TGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTC 22675770 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||| || || | ||||||||||| | ||||| ||||| | Sbjct 22675771 CAGTAGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATA 22675830 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | |||||||||||| || | |||| ||| ||||| || | ||||| || || |||| Sbjct 22675831 TTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTGTACCCAATTT 22675890 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||| ||| | ||||||| ||||| |||||||||||||||| | || | || Sbjct 22675891 GGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTC 22675950 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 22675951 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 22676007 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 || | || ||||| |||||||| ||||||||| || || || || | |||||| | Sbjct 22676008 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 22676067 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | |||| ||| | |||||||| |||||||||| |||||| | || | Sbjct 22676068 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAA 22676127 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| |||| | || ||||| ||||| ||||| ||||||||||| | Sbjct 22676128 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATC 22676187 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| || || || || || ||| ||||||||| | Sbjct 22676188 CATTTCACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATG 22676247 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| | ||| | ||||||||||| | || ||| || | | Sbjct 22676248 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 22676307 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 ||||||| || || ||||| ||||| |||||||| ||||| ||||||||||| || || | Sbjct 22676308 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 22676367 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTG 155746 | || | |||||||| ||||| ||||||||||| | | | ||||||||| | | Sbjct 22676368 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 22676427 Query 155747 CTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCA 155806 |||| |||||||| || | |||||| |||||| | ||| | || ||||| |||| Sbjct 22676428 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCA 22676487 Query 155807 ACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCC 155863 |||| || || ||||| |||||||| |||||||| || |||| ||| || || Sbjct 22676488 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGA---TAGTCAAGGTCGCGTTATTA 22676544 Query 155864 CTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTA 155923 ||| ||||| || || | ||||| ||| |||||||||||||||||||||||| |||| Sbjct 22676545 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 22676604 Query 155924 ACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 | ||||||||||||||||| || || |||||| Sbjct 22676605 ATGCTCACAACTTCCCTCTAGATCTAGCTGCT 22676636 >seq5 Length=28563423 Score = 592 bits (656), Expect = 2e-164 Identities = 731/993 (74%), Gaps = 15/993 (2%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| || || | || || | |||||||||||| | | Sbjct 14559547 TCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGA 14559488 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| |||||||||| || || |||| Sbjct 14559487 TGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTC 14559428 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||| || || || ||||||||||| | ||||| ||||| | Sbjct 14559427 CAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 14559368 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | |||||||||||| || | |||| ||| ||||| || | ||||| || || |||| Sbjct 14559367 TTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTT 14559308 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 | ||||| ||| | ||||||| || || |||||||||||||||| | || | || Sbjct 14559307 GAGAAGCTGCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTC 14559248 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 14559247 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 14559191 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 || |||| |||| |||||||| ||||||||| || || || || | |||||| | Sbjct 14559190 GT-TTGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 14559132 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | |||| ||| | |||||||| |||||||||| |||||| | || | Sbjct 14559131 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAA 14559072 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| |||| | || ||||| ||||| ||||| ||||||||||| Sbjct 14559071 TATCTGGTACTTTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCA-T 14559013 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| | Sbjct 14559012 CATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATG 14558953 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| | ||| | ||||||||||| | || ||| || | | Sbjct 14558952 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 14558893 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 ||||||| || || ||||| ||||| |||||||| ||||| || |||||||| || || | Sbjct 14558892 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTG 14558833 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTC-AAGAAGTCTTCACTTCTTCCTT 155745 | || | |||||||| ||||| ||||||||||| | | | ||||||||| | Sbjct 14558832 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTG 14558773 Query 155746 GCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTC 155805 ||||| |||||||| || | |||||| |||||| | ||| | || |||| ||| Sbjct 14558772 GCTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTC 14558713 Query 155806 AACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATC 155862 ||||| || || ||||| |||||||| |||||||| || |||| ||| || || Sbjct 14558712 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGA---TAGTCAAGGTCGTGTTATT 14558656 Query 155863 CCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGT 155922 ||| ||||| || || | ||||| ||| |||||||||||||||||||||||| ||| Sbjct 14558655 AATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 14558596 Query 155923 AACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 || ||||||||||||||||| || || |||||| Sbjct 14558595 AATGCTCACAACTTCCCTCTAGATCTAGCTGCT 14558563 >seq1 Length=75119905 Score = 480 bits (532), Expect = 9e-131 Identities = 577/783 (74%), Gaps = 6/783 (1%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| || || | || |||| |||||||||||| | | Sbjct 3929697 TCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGA 3929638 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || || ||| |||||||||| || || |||| Sbjct 3929637 TGATCCCTACCTTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATCGCAGCCCCTC 3929578 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||| || || || ||||||||||| | ||||| ||||| | Sbjct 3929577 CAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 3929518 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | |||||||||||| || | |||| ||| ||||| || | ||||| || || |||| Sbjct 3929517 TTATCTCTGGTGCTATTATTCCTACTTCTGCGGCAATCGGATTGCACTTTTACCCAATTT 3929458 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||| ||| | ||||||| ||||| |||||||||||||||| | || | || Sbjct 3929457 GGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTC 3929398 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 3929397 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 3929341 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 || | || ||||| |||||||| ||||||||| || || || || | |||||| | Sbjct 3929340 GTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 3929281 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | |||| ||| | |||||||| |||||||||| |||||| | || | Sbjct 3929280 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAA 3929221 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| |||| | || ||||| ||||| ||||| ||||||||||| | Sbjct 3929220 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATC 3929161 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| | Sbjct 3929160 CATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATG 3929101 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| | ||| | ||||||||||| | || ||| || | | Sbjct 3929100 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 3929041 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 ||||||| || || ||||| ||||| |||||||| ||||| ||||||||||| || || | Sbjct 3929040 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 3928981 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTG 155746 | || | |||||||| ||||| ||||||||||| | | | ||||||||| | | Sbjct 3928980 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 3928921 Query 155747 CTG 155749 ||| Sbjct 3928920 CTG 3928918 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 155895 TCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 ||||||||||| |||||||||||| ||||| |||||||||||| |||| ||||| ||||| Sbjct 4286483 TCTTGGTATGGCAGTAATGCACGAACGTAATGCTCACAACTTCTCTCTAGACCTAGCTGC 4286424 Query 155955 T 155955 | Sbjct 4286423 T 4286423 >seq3 Length=59935730 Score = 307 bits (340), Expect = 1e-78 Identities = 337/447 (75%), Gaps = 6/447 (1%) Strand=Plus/Plus Query 155512 CACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCA 155571 |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 155572 TTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTAC 155631 ||||| || ||| | ||| | ||||||||||| | || ||| || | |||||| Sbjct 16821757 TTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTAC 16821816 Query 155632 AAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGT 155691 || || || ||||| ||||| |||||||| ||||| ||||||||||| || || || || Sbjct 16821817 AAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGA 16821876 Query 155692 CTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCA 155751 | |||||||| ||||| ||||||||||| | | | ||||||||| | ||||| Sbjct 16821877 TTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCT 16821936 Query 155752 TGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTT 155811 |||||||| || | |||||| |||||| | ||| | || ||||| |||||||| Sbjct 16821937 TGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCTA 16821996 Query 155812 AACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACA 155868 || || ||||| |||||||| |||||||| || |||| ||| || || ||| Sbjct 16821997 AATGGATTCAATTTCAACCAATCTGTAGTTGA---TAGTCAAGGTCGCGTTATTAATACT 16822053 Query 155869 TGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCT 155928 ||||| || || | ||||| ||| |||||||||||||||||||||||| ||||| ||| Sbjct 16822054 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 16822113 Query 155929 CACAACTTCCCTCTTGACCTTGCTGCT 155955 |||||||||||||| || || |||||| Sbjct 16822114 CACAACTTCCCTCTAGATCTAGCTGCT 16822140 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| || | | || |||| ||||| |||||| | | Sbjct 15391380 TCTGCAACTGGATAACTAGCACTGAAAATCATCTTTACATCGGATGGTTTGGTGTTTTGA 15391321 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| ||||||| || || || |||| Sbjct 15391320 TGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTAATCGCAGCCCCTC 15391261 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||| || || || ||||||||||| | ||||| ||||| | Sbjct 15391260 CAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 15391201 Query 155150 T 155150 | Sbjct 15391200 T 15391200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584834995307680