Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq4 513 4e-141 seq28 509 5e-140 seq5 473 3e-129 seq1 392 9e-105 seq3 212 2e-50 >seq4 Length=48772488 Score = 513 bits (568), Expect = 4e-141 Identities = 714/992 (72%), Gaps = 10/992 (1%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| || Sbjct 22676636 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 22676577 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 22676576 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 22676517 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| ||||| || ||||||||| ||||| | | || Sbjct 22676516 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 22676457 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| ||||||| |||||||| | ||| |||| Sbjct 22676456 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGT 22676398 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || |||| || ||||| ||||| || ||||| || || |||| Sbjct 22676397 TGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTAT 22676338 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| | || |||||||| || || || | || |||||| |||| || || | Sbjct 22676337 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTT 22676278 Query 40888 CCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCAC 40944 ||| || | | |||| || ||||| || ||||||||| || | | ||| | Sbjct 22676277 CCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGC 22676221 Query 40945 CAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTT 41004 |||| || || || || || | ||| || ||||| ||||| || |||||||| ||||| | Sbjct 22676220 CAAAAACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCCT 22676161 Query 41005 GGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAG 41064 |||| |||| ||| |||||||| || ||| |||||||||||||||||||||||||| Sbjct 22676160 GGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGC 22676101 Query 41065 AACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGT 41124 || ||||| | || |||| ||||| ||||| || |||| | ||||||| | Sbjct 22676100 TTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAAT 22676041 Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| ||| ||||| || | |||||| | | | | ||||||||||| | ||| Sbjct 22676040 ATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCA 22675981 Query 41185 CGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGT 41244 || ||||| || | ||| ||||| | ||||| || | ||| || || || |||| Sbjct 22675980 TATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGT 22675921 Query 41245 ATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGT 41304 ||| ||| || || | | | |||||||| |||||||| || || | ||||||||| Sbjct 22675920 ATAACCATTCATCAACGGATGCAGCTTCCCAAATTGGGTACAAGTGCAATCCGATTGCCG 22675861 Query 41305 TAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAA 41364 ||| | |||| | ||| ||||| ||||||||||| || || | ||| || || |||| Sbjct 22675860 CAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAA 22675801 Query 41365 CGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-A 41423 ||||| || || ||||| |||||||| || || |||||||| |||||||| || || | Sbjct 22675800 TAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATA 22675741 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 || | || || || | ||| | || ||||| | ||||| ||||| || | ||| || Sbjct 22675740 CA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGA 22675682 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || || |||||||| | |||||| || || Sbjct 22675681 CGATTTTCAGTGCTAGTTATCCAGTTGCAGAA 22675650 >seq28 Length=135199 Score = 509 bits (564), Expect = 5e-140 Identities = 713/992 (72%), Gaps = 10/992 (1%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| || Sbjct 122 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 181 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 182 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 241 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| ||||| || ||||||||| ||||| | | || Sbjct 242 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 301 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| ||||||| |||||||| | ||| |||| Sbjct 302 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGT 360 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || |||| || ||||| ||||| || ||||| || || |||| Sbjct 361 TGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTAT 420 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| | || |||||||| || || || | || |||||| |||| || || | Sbjct 421 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTT 480 Query 40888 CCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCAC 40944 ||| || | | |||| || ||||| || ||||||||| || | | ||| | Sbjct 481 CCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGC 537 Query 40945 CAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTT 41004 | || || || || || || | ||| || ||||| ||||| || |||||||| || || | Sbjct 538 CGAAAACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCGGCCT 597 Query 41005 GGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAG 41064 |||| |||| ||| |||||||| || ||| |||||||||||||||||||||||||| Sbjct 598 GGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAGC 657 Query 41065 AACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGT 41124 || ||||| | || |||| ||||| ||||| || |||| | ||||||| | Sbjct 658 TTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAAT 717 Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| ||| ||||| || | |||||| | | | | ||||||||||| | ||| Sbjct 718 ATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCCA 777 Query 41185 CGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGT 41244 || ||||| || | ||| ||||| | ||||| || | ||| || || || |||| Sbjct 778 TATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGT 837 Query 41245 ATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGT 41304 ||| ||| || || | | | |||||||| |||||||| || || | ||||||||| Sbjct 838 ATAACCATTCATCAACGGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATTGCCG 897 Query 41305 TAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAA 41364 ||| | |||| | ||| ||||| ||||||||||| || || | ||| || || |||| Sbjct 898 CAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAA 957 Query 41365 CGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-A 41423 | ||||| || || ||||| |||||||| || || |||||||| |||||||| || || | Sbjct 958 CAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAATA 1017 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 || | || || || | ||| | || ||||| | ||||| ||||| || | ||| || Sbjct 1018 CA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGA 1076 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || || |||||||| | |||||| || || Sbjct 1077 CGATTTTCAGTGCTAGTTATCCAGTTGCAGAA 1108 >seq5 Length=28563423 Score = 473 bits (524), Expect = 3e-129 Identities = 708/993 (71%), Gaps = 13/993 (1%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| || Sbjct 14558563 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 14558622 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 14558623 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACACGACCTTGACTATCAACTAC 14558682 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| ||||| || |||||||| ||||| | | || Sbjct 14558683 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACCCCATAGTACTAATACCTAAAGCAGT 14558742 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTA-TTG 40766 | ||| || || | || || ||||| ||||||| |||||||| | || | | ||| Sbjct 14558743 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACAGAGAGTTG 14558801 Query 40767 TTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTA 40826 ||||| ||||||||| || |||| || ||||| ||||| || || || || || ||| Sbjct 14558802 TTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCCGCCACAATATTA 14558861 Query 40827 TAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTC 40886 |||||||| | || |||||||| || || || | || |||||| |||| || || Sbjct 14558862 TAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTT 14558921 Query 40887 TCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCA 40943 |||| || | | |||| || ||||| || ||||||||| || | | ||| Sbjct 14558922 TCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCG 14558978 Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 || || || || || || || | ||| || |||| ||||| || |||||||| ||||| Sbjct 14558979 CCGAAAACACCAGCTACACCTAACATGTGAAATGA-TGCATAAGGATGTTGTGCTCTGCC 14559037 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||| ||| ||||| || || ||| |||||||||||||||||||||||||| Sbjct 14559038 TGGAATACAATCATAAAGTTTAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAG 14559097 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTG 41123 || ||||| | || |||| ||||| ||||| || |||| | ||||||| Sbjct 14559098 CTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAA 14559157 Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 ||||| |||| ||||| || |||||| | | | | ||||||||||| | ||| Sbjct 14559158 TATGCAACAACAATCCAAGGGTGCATACCAAA-CGGAAACTAAGTTCCCACTCACGACCC 14559216 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 || ||||| || | ||| ||||| | ||||| || | ||| || || || ||| Sbjct 14559217 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 14559276 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| || || || | | | ||||| || |||||||| || || | ||||||||| Sbjct 14559277 TATAATCATTCATCAACGGATGCAGCTTCTCAAATTGGGTAAAAGTGCAATCCGATTGCC 14559336 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||| | |||| | ||| ||||| ||||||||||| || || | ||| || || ||| Sbjct 14559337 GCAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAA 14559396 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA- 41422 || ||||| || || ||||| |||||||| || || |||||||| |||||||| || || Sbjct 14559397 ACAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCTGCGATGAAGGCGATAATAAAT 14559456 Query 41423 ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAG 41482 ||| | || || || | ||| | || ||||| | ||||| ||||| | | ||| || Sbjct 14559457 ACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCTGATGTAAAG 14559515 Query 41483 GCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || || |||||||| | |||||| || || Sbjct 14559516 ACGATTTTCAGTGCTAGTTATCCAGTTGCAGAA 14559548 >seq1 Length=75119905 Score = 392 bits (434), Expect = 9e-105 Identities = 561/783 (72%), Gaps = 9/783 (1%) Strand=Plus/Plus Query 40737 CCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAAATATTAGTCTA 40796 ||||||| |||||||| | ||| |||||||| ||||||||| || |||| || Sbjct 3928921 CCAAGAA-GAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCGG 3928979 Query 40797 CCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATAC 40856 ||||| ||||| || ||||| || || ||||||||||| | || |||||||| || || Sbjct 3928980 CCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTCCTCTTGACCAAATTTGTAA 3929039 Query 40857 CCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGA---TTGAGGAAGTAACAAGG 40913 || | || |||||| |||| || || |||| || | | |||| || ||||| Sbjct 3929040 CCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGT--TACCAAGG 3929097 Query 40914 CTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGG 40973 || ||||||||| || | | ||| || || || || || || || | ||| || Sbjct 3929098 AA-CCATGCATAGCACTGAATAGGGAACCGCCGAAAACACCAGCTACACCTAACATGTGA 3929156 Query 40974 AATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCA 41033 ||||| ||||| || |||||||| ||||| ||||| |||| ||| |||||||| || ||| Sbjct 3929157 AATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCA 3929216 Query 41034 CTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAAT 41093 |||||||||||||||||||||||||| || ||||| | || |||| ||||| Sbjct 3929217 GATATTCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATAGGGTAAATCAAGAAA 3929276 Query 41094 ACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCT 41153 ||||| || |||| | ||||||| ||||| ||| ||||| || | |||||| Sbjct 3929277 ACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCC 3929336 Query 41154 AGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGA 41213 | | | | ||||||||||| | ||| || ||||| || | ||| ||||| Sbjct 3929337 AAACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGT 3929396 Query 41214 AAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCC 41273 | ||||| || | ||| || || || ||||||| ||| || || | | | |||||| Sbjct 3929397 AGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCAGCTTCC 3929456 Query 41274 CAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATA 41333 || |||||||| || || | ||||||||| ||| | |||| | ||| ||||| ||| Sbjct 3929457 CAAATTGGGTAAAAGTGCAATCCGATTGCCGCAGAAGTAGGAATAATAGCACCAGAGATA 3929516 Query 41334 ATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACA 41393 |||||||| || || | ||| || || ||||| ||||| || || ||||| |||||||| Sbjct 3929517 ATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACT 3929576 Query 41394 GGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAAT 41452 || || |||||||| |||||||| || || ||| || || || | ||| | || || Sbjct 3929577 GGAGGGGCTGCGATGAAGGCGATAATAAATACA-AAAGTTGCGGTCAATAAGGTAGGGAT 3929635 Query 41453 CATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACA 41512 ||| | ||||| ||||| || | ||| || || || || |||||||| | |||||| || Sbjct 3929636 CATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTGCTAGTTATCCAGTTGCA 3929695 Query 41513 AAA 41515 || Sbjct 3929696 GAA 3929698 >seq3 Length=59935730 Score = 212 bits (234), Expect = 2e-50 Identities = 319/448 (71%), Gaps = 8/448 (2%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| || Sbjct 16822140 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 16822081 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 16822080 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 16822021 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| ||||| || ||||||||| ||||| | | || Sbjct 16822020 AGATTGGTTGAAATTGAATCCATTTAGGTTGAACGCCATAGTACTAATACCTAAAGCAGT 16821961 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| ||||||| |||||||| | ||| |||| Sbjct 16821960 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGT 16821902 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || |||| || ||||| ||||| || ||||| || || |||| Sbjct 16821901 TGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTAT 16821842 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| | || |||||||| || || || | || |||||| |||| || || | Sbjct 16821841 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTT 16821782 Query 40888 CCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCAC 40944 ||| || | | |||| || ||||| || ||||||||| || | | ||| | Sbjct 16821781 CCCTGATCAAACTAGAGG--TTACCAAGG-AACCATGCATAGCACTGAATAGGGAACCGC 16821725 Query 40945 CAAAGACGCCTGCAACGCCGAGCATATG 40972 | || || || || || || | ||| || Sbjct 16821724 CGAAAACACCAGCTACACCTAACATGTG 16821697 Score = 120 bits (132), Expect = 9e-23 Identities = 141/188 (75%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 41329 ATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATAT 41388 ||| ||||||||| || || | ||| || || ||||| ||||| || || ||||| |||| Sbjct 15391195 ATAAAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAATACCATCAATAT 15391254 Query 41389 CTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCT 41447 |||| || || |||||||| |||||||| || || ||| | || || || | ||| | Sbjct 15391255 CTACTGGAGGGGCTGCGATTAAGGCGATAATAAATACA-GAAGTTGCGGTCAATAAGGTA 15391313 Query 41448 GGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAG 41507 || ||||| | ||||||||||| || | ||| || | || || |||||||| | |||| Sbjct 15391314 GGGATCATCAAAACACCAAACCATCCGATGTAAAGATGATTTTCAGTGCTAGTTATCCAG 15391373 Query 41508 TTACAAAA 41515 || || || Sbjct 15391374 TTGCAGAA 15391381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143702352218952