Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 4e-12 >seq1 Length=75119905 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| || ||||| | | || || |||| || | ||||| ||||||||| Sbjct 27893855 TCTTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCAAAG 27893914 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 |||| | ||| || || ||||| ||||| || || || || || || || |||||| Sbjct 27893915 ATTAGGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTA 27893974 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | || ||||| || || || ||||||||||| || || || || || || | | Sbjct 27893975 TCGATTGTGTCAGACGACTCGACCTCCAGAGTAATGGTCTTGCCTGTCAAGGTCTTGACA 27894034 Query 192526 AATATCTGCAT 192536 || || ||||| Sbjct 27894035 AAGATTTGCAT 27894045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479646817800