Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 224 2e-52 seq2 178 2e-38 seq3 163 4e-34 >seq1 Length=75119905 Score = 224 bits (248), Expect = 2e-52 Identities = 244/324 (75%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| ||| | |||||| || ||||| |||||||||||||||||| Sbjct 42406173 CCTTCGTCGCGGGAGATAAGCTCGTTGGAGAAAGTTAGGCCCGGCATGAGGCCGCGCTTC 42406114 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||||| ||||||||| || || ||||||||| ||| ||| Sbjct 42406113 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAATATCCCCTCGACGCAGGCGAAG 42406054 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| || ||||||||||| || ||| || |||||| ||| ||||| Sbjct 42406053 GCGACCAGGCGCTCGGCAAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAT 42406000 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| | ||| | ||| | ||||||| |||||| || || ||||||||||| Sbjct 42405999 TCGGCCTTGCGGCGCACGGCGGGGATGGTGTCGACGGCGCGGAAAAGACGGTCCTTCTCG 42405940 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || ||| || |||||| ||||| || || ||||| |||| ||||||||||| ||| Sbjct 42405939 ACGTCCTCCCGGATGTAGGTCTCGATAAGCAGGGAGTACATCTCAGAGTGGATGTTCTCG 42405880 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||||||||| || ||| Sbjct 42405879 ATGGCGATCTGGAAGCCGTAGAAG 42405856 Score = 221 bits (244), Expect = 2e-51 Identities = 244/324 (75%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| ||| || |||||||| || |||||| Sbjct 54132941 CCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGACCACGCTTC 54133000 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||||| ||||||||| ||||||||||||||| ||| ||| Sbjct 54133001 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAG 54133060 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| |||||||| || | | ||| || | |||||| ||| | ||| Sbjct 54133061 GCGACGAGGCGCTCGGCGAA---GCGCTCGCCGCCT---TCGATCCAGCGCATGGACCAG 54133114 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| | || | ||| || ||||||| |||||| |||||| ||||||||||| Sbjct 54133115 ACGGCCTTGCGGCGGACGGCGGGGACGGTGTCGACGGCGCGGAAGAGGCGGTCCTTCTCG 54133174 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | | ||| || |||||| |||| || || ||||| |||| ||||||||||| ||| Sbjct 54133175 GCGGCGTCGCGGATGTAGGTCTCGAGCAGCAGGGAGTACATCTCCGAGTGGATGTTCTCG 54133234 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||||||||| || ||| Sbjct 54133235 ATGGCGATCTGGAAGCCGTAGAAG 54133258 Score = 197 bits (218), Expect = 2e-44 Identities = 231/311 (74%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||||| |||||| |||||| |||||||||||||||| |||||||| | ||||||| Sbjct 54132635 TAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATGAGCTCCATC 54132694 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 || |||||||||| | | ||| ||| |||||| || | || ||||||||| Sbjct 54132695 CAGTCGAACGGGTTGACGGCGTTGTACATCTTGCTGCACCCCAGAGCCGTGAGCAGGCGG 54132754 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| || |||||||||| |||||| ||||||||||||||| ||| || Sbjct 54132755 TCGGCGACGAACTCGATGTACTGGCCCATGAGTCCGGCGTTCATGCCGACGAGGGCACAT 54132814 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTG 794147 ||||| | |||| || ||||| ||||||| || ||||| ||| || ||||| | Sbjct 54132815 GGCAGAGCGTCGCAGATGAACTCCCTCTCGATGTCAACGGCGTCGGCGACGATCT---CG 54132871 Query 794148 GGCACGTCGGACGAC---GGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 | ||| |||| | ||||| || ||| | |||||| |||||||| |||||| Sbjct 54132872 CGGACGCGGGACTCCTCGAGCTTGCCGTTGAGGAGTTCGTAGAGGAGGCAGGCGAAGTCG 54132931 Query 794205 CAATGCAGACC 794215 || ||||| || Sbjct 54132932 CAGTGCAGCCC 54132942 Score = 178 bits (196), Expect = 2e-38 Identities = 229/311 (74%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| || |||||||| |||| || ||||||| ||||||| Sbjct 42406479 TAGTCTCCAACACGCTTCTCGAAGAAATTGGTCTTTCCCTGCAGGGAGATCAGCTCCATC 42406420 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 || ||| ||||| | | ||| ||||| ||| || |||| | ||||||||| Sbjct 42406419 CAGTCGAATGGGTTTGTGGCGTTGTACATCTTCTTGCAGCCCAGCGCCATGAGCAGGCGG 42406360 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CAC 794086 || |||||||| || |||||||||| ||| ||| || |||||||||| | ||| || || Sbjct 42406359 TCCGCGACGAACTCGATGTACTGGCTCATAAGGTCGCCGTTCATGCCCACGAGAGCGCAA 42406300 Query 794087 GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCT 794146 ||| |||| |||| ||||||||| ||||||| || ||||| ||| || ||||| | Sbjct 42406299 GGG-AGCGCGTCGCAGACAAACTCCCTCTCGATGTCAACGGCGTCGCCGACGATCT-CAC 42406242 Query 794147 GGGCACGTCGGACG-ACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGC 794205 || | ||| || | ||||| ||| || |||||| |||||||||||||||| Sbjct 42406241 GGACGCGTGACTCGTCCAGCTTGCTCCGGAGGATGTCGTAGAGGAGGCAGGCAAAGTCGC 42406182 Query 794206 AATGCAGACCT 794216 | ||||| ||| Sbjct 42406181 AGTGCAGGCCT 42406171 Score = 170 bits (188), Expect = 3e-36 Identities = 178/233 (76%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || || || || |||||| ||| ||| |||||||| ||||||||| Sbjct 54133264 GGCCTCGGCCACCTGCACGTCGGACATGAACCGGGAGGCGAGGTTCTCGAGCACGATGCC 54133323 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 |||| ||||||||| |||||||| ||||| ||| ||||| ||||||||| | ||| Sbjct 54133324 GTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAGAG 54133383 Query 796269 CG---AGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | |||||||| || ||| | | |||||| ||||||||||| ||||| ||||| Sbjct 54133384 CGTCTCGTCCCAGTGGCGCGCGTCCGAGGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGA 54133443 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| | ||||| ||||| | |||||| ||| | |||| ||||| ||||||| Sbjct 54133444 CGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGTACCGGATCGGGAACA 54133496 Score = 170 bits (188), Expect = 3e-36 Identities = 181/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||| ||| |||| || |||||| | | Sbjct 65475599 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCATGCTTGGCGAGCTCGCCGGGGA 65475658 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || |||| |||||||||||| |||| | ||| ||| |||||| | Sbjct 65475659 GGACGAGACGAACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 65475718 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| | | |||||| | | | || | |||||||||| || ||||||| Sbjct 65475719 GCGCCAGCTTGGCCGCCTCGCCGGCAAGCTTTTCAAAAATGTCGTTGATGAAGGAGTTCA 65475778 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||||||||| | ||| ||||||||| | ||| ||||||||||||||||| |||||| Sbjct 65475779 TGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGGACCTTG 65475837 Score = 168 bits (186), Expect = 1e-35 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| |||||||| ||||| |||||||||||| |||| || ||||| | | || Sbjct 46858665 ACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCTGGGAGGA 46858606 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 ||||| |||| ||||||||||||||||| ||| ||| |||||| ||| | Sbjct 46858605 CGAGGCGGACGGAGGTCTGGATCTCGCGGGACGTGATGGTGGGCTTCTTGTTGTAGCGGG 46858546 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | ||| ||| | ||| |||| |||||||||| || |||||||||| Sbjct 46858545 CGAGCTTGGCGGACTCCCCGGCGAGTTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGA 46858486 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 46858485 TGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 46858430 Score = 161 bits (178), Expect = 2e-33 Identities = 176/233 (76%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || ||||| || |||||| ||| || |||||||| |||||||| Sbjct 42405850 GGCCTCGGCGACCTGGACGTCGGACATGAACCGGGACGCGAGGTTCTCGAGGACGATGCC 42405791 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 |||| ||||||||| |||||||| ||||| || ||||| |||||||||| | || Sbjct 42405790 GTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGTTGGACAG 42405731 Query 796269 CGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | |||||||| || ||||| | |||||| |||||||| || ||||| ||||| Sbjct 42405730 CGTGGTGTCCCAGTGGCGCGCGTCGGAGGAGAGGTCCACCTCCTCCGCCGTCCAGAAGGA 42405671 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| | ||||| ||||| | |||||| ||| | || | ||||||||||||| Sbjct 42405670 CGCCACCGCCTTCTTGTAGAACTCCCAGATCTGAGGGAACCGGATGGGGAACA 42405618 Score = 156 bits (172), Expect = 7e-32 Identities = 178/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| || ||||||||| |||| || || ||| | | Sbjct 6219070 TGAACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCGGGGA 6219011 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || |||| |||||||||||| |||| | ||| ||| |||||| || Sbjct 6219010 GGACGAGACGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 6218951 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | ||| ||| | | | || | |||||||||| || ||||||| Sbjct 6218950 GGGCAAGCTTGGCGGACTCACCGGCCAACTTCTCAAAGATGTCGTTGATGAAGGAGTTCA 6218891 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 6218890 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 6218832 Score = 147 bits (162), Expect = 3e-29 Identities = 176/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| |||||||||||||| || || |||||||||||| |||| || |||||| | | Sbjct 55016139 TGAACTTTGTGACGGCCTTGGTGCCTTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 55016198 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||| | || | ||| ||| |||||| || Sbjct 55016199 GGACGAGGCGAACCGAAGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTAGC 55016258 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | | | ||| ||| |||| |||||||||| || ||||||| Sbjct 55016259 GGGCGAGCTTGGCCGACTCCCCAGCGAGTTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 55016318 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | ||||||||| |||||||||||||||||| Sbjct 55016319 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 55016377 Score = 87.8 bits (96), Expect = 3e-11 Identities = 91/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1249565 GCCACGGGCGTCGCCTATCTGCACGCGCTCG---ACCCGCCCGTCGTCCACCGCGATCTC 1249621 |||| || | |||| || |||||| || | |||||||| || ||||||||| || Sbjct 68060548 GCCAGGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACATC 68060489 Query 1249622 AAGAGCAGCAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCT 1249680 ||| ||||||| | ||| ||||| |||||||||| ||||||||||||||| || || Sbjct 68060488 AAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTGGCCGACTTCGGGCT 68060430 >seq2 Length=59384932 Score = 178 bits (196), Expect = 2e-38 Identities = 185/240 (77%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 20758168 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 20758227 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||||| ||||||||||||||||| | ||| ||| |||||| | Sbjct 20758228 GGACGAGGCGCACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 20758287 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || ||||||| ||| ||| |||| |||||||||| || |||||| Sbjct 20758288 TGGCGAGCTTTGCGGCCTCC-TGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 20758346 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 20758347 ATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 20758406 Score = 161 bits (178), Expect = 2e-33 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| ||||| |||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 53451724 TGAACTTTGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCAAGCTCGCCGGGGA 53451783 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||| |||||||||||||| |||| | ||| ||| |||||| | Sbjct 53451784 GGACGAGGCGCACCGCGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 53451843 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || | | | |||| | ||| || | || ||||||| || ||||||| Sbjct 53451844 GCGCGAGCTTGGCCGACTCGCCGGCGAGCTTCTCAAATATATCGTTGATGAAGGAGTTCA 53451903 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| |||||| || | ||| |||||||||||||||||||||||| Sbjct 53451904 TGATGGACATGGCCTTGGAGGAGATACCAATGTCCGGGTGCACCTGCTTGAGCACCTTG 53451962 Score = 147 bits (162), Expect = 3e-29 Identities = 176/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| ||||| || ||| |||| || || || | | Sbjct 26569386 TGAACTTGGTGACGGCCTTGGTGCCCTCCGAGACAGCATGCTTGGCGAGCTCTCCTGGGA 26569327 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||| |||| | ||| ||| |||||| || Sbjct 26569326 GGACGAGGCGGACAGAAGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 26569267 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | | ||||| | | | || | |||||||||| || ||||||| Sbjct 26569266 GGGCGAGCTTGGCTGCCTCACCGGCCAGCTTCTCAAAGATGTCGTTGATGAAGGAGTTCA 26569207 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||||||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 26569206 TGATCGACATGGCCTTGGAGGAGATGCCGATGTCAGGGTGCACCTGCTTGAGCACCTTG 26569148 Score = 141 bits (156), Expect = 1e-27 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | | | Sbjct 218975 ACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGAAGAA 219034 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 || | || | |||||||||||| | || | ||| ||| |||||| | | Sbjct 219035 CAAGCCTGACCGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACCTGG 219094 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 |||| | | | ||| | ||| |||| |||||||||| || |||||||||| Sbjct 219095 CCAGCTTGGCCGACTCCCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGA 219154 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||||| | ||| ||||||||| | ||||||||| |||||||||||||||||| Sbjct 219155 TGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 219210 Score = 138 bits (152), Expect = 2e-26 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | | Sbjct 245359 ACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCCCCGGGAAGAA 245300 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 || | || | |||||||||||| | || | ||| ||| |||||| | || Sbjct 245299 CAAGCCTGACCGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACCTCG 245240 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | | | ||| | ||| |||| |||||||||| || |||||||||| Sbjct 245239 CGAGCTTGGCCGACTCCCCGGCGAGCTTCTCGAAAATGTCGTTGATGAAGGAGTTCATGA 245180 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||||| | ||| ||||||||| | ||||||||| |||||||||||||||||| Sbjct 245179 TGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 245124 Score = 138 bits (152), Expect = 2e-26 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 |||||||| |||||||| |||||||| ||||| ||| |||| || || || | | || Sbjct 26595770 TTGGTGACTGCCTTGGTGCCCTCTGAAACGGCATGCTTGGCGAGCTCCCCAGGGAGGACG 26595829 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 ||||| || | ||||||||||| |||| | ||| ||| |||||| ||| || Sbjct 26595830 AGGCGGACAGAAGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCG 26595889 Query 1485595 AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATC 1485654 || | | ||||| | | | || | |||||||||| || |||||||||||| Sbjct 26595890 AGCTTGGCTGCCTCACCGGCCAGCTTCTCAAAGATGTCGTTGATGAAGGAGTTCATGATC 26595949 Query 1485655 GACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| | ||| ||||||||| | ||||||||| ||||||||||| |||||| Sbjct 26595950 GACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGGACCTTG 26596003 >seq3 Length=59935730 Score = 163 bits (180), Expect = 4e-34 Identities = 183/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 55040341 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 55040282 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| |||| |||||||||||| | || | ||| ||| |||||| | Sbjct 55040281 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACC 55040222 Query 1485590 GCGCCAG-GCGGCCGGC-CTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 ||| || ||||| | | | | | | | | |||| |||||||||| || ||||| Sbjct 55040221 TCGCGAGCTTGGCCGACTCCCCGGCCAGCTTC--TCGAAGATGTCGTTGATGAAGGAGTT 55040164 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||||||| | ||| ||||||||||||||||||||||| Sbjct 55040163 CATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTT 55040104 Query 1485708 G 1485708 | Sbjct 55040103 G 55040103 Score = 104 bits (114), Expect = 4e-16 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| || |||||| || | ||||| || ||||||||||||||||||||| Sbjct 45505273 AGGTCGACCAGGCCGTCCTCTTCGACCTCATCCTGGCTGCCAACTACCTCGACATCAAGG 45505332 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 || || || | ||| ||||||| ||| || | |||||||||||| | ||||| Sbjct 45505333 GGCTGCTGGACCTCACCTGCCAGACCGTTGCCGACATGATCAAGGGCAAGACCGTCGAGG 45505392 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||| | || ||||||||| ||| Sbjct 45505393 AGATCCGCACCAAGTTCAACATCAAGAACG 45505422 Score = 87.8 bits (96), Expect = 3e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| |||||| || ||| || || || |||| ||| |||||| || Sbjct 59717967 GCCGCCAACTACCTGGACATCCAGAGCCTACTGGACCTGACATGCATGACGGTGGCCGAC 59718026 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | || ||||||||||||| ||| || ||||||||| ||| ||||| Sbjct 59718027 CAGATGAAGGGCAAGTCGCTCGACGAGATCCGCAAGCACTTCCACATC 59718074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243421512292