Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 149 1e-30 seq1 145 1e-29 >seq3 Length=59935730 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| || ||| || || | |||||| || || ||||| || || ||||| || | | Sbjct 13693037 CCACCTCGCAGACGAAGGACAAGGTGCAGGGTGGACTCTTTTTGAATGTTATAGTCTGCT 13692978 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | || || || || || || ||||||||||| || | || || ||||| || Sbjct 13692977 AAGGTGTGCCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGG 13692918 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| |||||||||||||| || ||||| || ||||| ||| || ||| || Sbjct 13692917 ATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTATCTATCGTGTCAGAAGATTCAACC 13692858 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || |||||||| || | ||||| ||||| |||||||| Sbjct 13692857 TCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 13692811 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | ||| || ||||| |||||||| || | ||||| | Sbjct 13693265 CCACCACGCAGACGAAGGACAAGGTGTAGGGTAGACTCTTTCTGAATGCTGTAATCCGCC 13693206 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || || || || ||||||||||| || | || || || || || Sbjct 13693205 AGGGTGCGCCCGTCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGG 13693146 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| |||||||||||||| || ||||| ||||||||||| | || || Sbjct 13693145 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACATTGTCAATCGTATCCGATGACTCGACC 13693086 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || |||||||| || | ||||| || || |||||||| Sbjct 13693085 TCCAAAGTAATGGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 13693039 Score = 140 bits (154), Expect = 6e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| |||||||| || ||||| ||||| ||||||| | | | || Sbjct 53307168 CGGAGGACGAGGTGAAGAGTAGACTCCTTCTGGATATTGTAATCAGCCAATGTACGGCCA 53307227 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| |||||||| || || || || || || || || || |||||| Sbjct 53307228 TCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTA 53307287 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || ||||||||||| || ||||| ||||| || ||| || | || || |||| |||||| Sbjct 53307288 TCCTGAATCTTTGCCTTCACATTGTCAATGGTGTCA-GAGCTCTCGACCTCCAGAGTTAT 53307346 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| | ||||| ||||| || ||||| Sbjct 53307347 GGTCTTCCCTGTAAGTGTCTTAACAAAGATTTGCAT 53307382 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | ||| || || || || ||||| || || || || | Sbjct 2681924 TACCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 2681983 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || ||||| || || || ||||||||||| || | || || || || | Sbjct 2681984 CGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGG 2682043 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| || ||||| || || || || ||||| || ||| | || | Sbjct 2682044 GAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGATGACTCCA 2682103 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 2682104 CCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 2682152 Score = 118 bits (130), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | |||||| ||||| |||||||| ||||| || || | Sbjct 13692809 CCACCACGCAGACGGAGGACAAGGTGCAGGGTAGACTCTTTCTGAATATTGTAGTCCGCC 13692750 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| || || || | || || || ||||| || | || || || ||||| Sbjct 13692749 AAGGTGCGACCATCCTCAAGCTACTTCCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGA 13692690 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || |||||||||||||| ||||| || ||||| || ||||| ||| | || || Sbjct 13692689 ATGCCCTCCTTATCTTGAATTTTTGCCTTCACATTATCGATCGTGTCAGATGACTCGACC 13692630 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 13692629 TCAAGGGTAATTGTCTTGCCAGT-GAGGTCTTCACAAAAATCTGCAT 13692584 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | |||||| || || || ||||| || || ||||| | || | | ||| Sbjct 13693481 CGGAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGCCCG 13693422 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || |||||||| || || | || || || || || || || ||||| Sbjct 13693421 TCCTCAAGCTGCTTCCCAGCAAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 13693362 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| || || || || || || || || || || || |||||||| || Sbjct 13693361 TCTTGAATCTTCGCCTTGACGTTGTCGATTGTGTCCGAAGACTCAACCTCCAAAGTGATG 13693302 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | |||||| ||||| |||||||| Sbjct 13693301 GTCTTACCAGTAAGCGTCTTGACAAAGATCTGCAT 13693267 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| |||| ||| || || || || ||||| || || || |||| Sbjct 3234590 TACCACCACGCAGACGCAGCACTAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 3234649 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| || || || || || ||||||||||| | | || || || || | Sbjct 3234650 CAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCCGGGG 3234709 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || ||||| ||||| || || | || | Sbjct 3234710 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCTGACGACTCAA 3234769 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || ||||||||||||| ||||| || || |||||||| Sbjct 3234770 CCTCAAGGGTGATGGTCTTGCCTGTCAGTGTCTTCACGAAGATCTGCAT 3234818 >seq1 Length=75119905 Score = 145 bits (160), Expect = 1e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||||||||| ||||||||||| || || ||||| | || | | || Sbjct 27893831 CGAAGCACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCA 27893890 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || ||||| |||||||||||||| | || || || || || ||||| ||||| Sbjct 27893891 TCCTCAAGCTGTTTGCCAGCAAAGATTAGGCGCTGCTGGTCCGGTGGAATTCCCTCCTTG 27893950 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| || || || ||| | || || |||| ||| || Sbjct 27893951 TCCTGGATCTTCGCCTTCACATTATCGATTGTGTCAGACGACTCGACCTCCAGAGTAATG 27894010 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||||||| ||||| ||||| || ||||| Sbjct 27894011 GTCTTGCCTGTCAAGGTCTTGACAAAGATTTGCAT 27894045 Score = 131 bits (144), Expect = 3e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||| || || || ||||| || || ||||| | || | | || Sbjct 28210522 ACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGGCC 28210463 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||||||||| || | || || ||||| || || || ||||| Sbjct 28210462 ATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTT 28210403 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || |||||||| || || || ||||| || || || ||| || |||| || || Sbjct 28210402 GTCCTGGATCTTTGCCTTCACGTTGTCAATGGTGTCCGAAGATTCAACCTCCAGTGTGAT 28210343 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| |||||||||||||| || || ||||||||| Sbjct 28210342 GGTCTTCCCTGTCAACGTCTTAACGAAGATCTGCATT 28210306 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||||| || || || ||||| ||||| ||||| | || | | |||| Sbjct 27894059 CGAAGCACAAGGTGCAAGGTGGACTCCTTCTGGATATTGTAATCTGCCAGGGTGCGACCG 27894118 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| ||||| || ||||||||||| || | || || ||||| || || || ||||| Sbjct 27894119 TCTTCCAGTTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTG 27894178 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || |||||||| || ||||| || ||||| ||| | || || || | || || Sbjct 27894179 TCCTGGATCTTTGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGTGTGATG 27894238 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| || ||||| Sbjct 27894239 GTCTTGCCAGTAAGGGTCTTCACAAAGATTTGCAT 27894273 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||| || ||||| ||||| || |||||||| | ||| | | || Sbjct 27880821 ACGGAGGACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAATCCGCAAGAGTGCGGCC 27880880 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||||||||| || || || || || ||| | || ||||| Sbjct 27880881 ATCCTCAAGCTGCTTACCAGCAAAGATGAGCTGCTGCTGGTCCGGGGGTGTGCCCTCCTT 27880940 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| || || ||||| || || || ||| || || || || | || || Sbjct 27880941 ATCCTGGATCTTCGCCTTCACATTGTCGATTGTGTCAGAAGATTTAACCTCTAGGGTAAT 27881000 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||| ||||| || || |||||||| Sbjct 27881001 GGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 27881036 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||||| ||||| ||||| ||||| ||||| | || | | ||| Sbjct 28210294 ACGAAGCACCAGATGCAGAGTGGATTCCTTCTGGATATTGTAATCTGCAAGGGTGCGACC 28210235 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || || || ||||| || | || || || || || || || ||||| Sbjct 28210234 ATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTT 28210175 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| || || ||||| ||||| || || | || || |||| || || Sbjct 28210174 GTCCTGGATCTTCGCCTTGACATTGTCAATTGTGTCGGACGACTCAACCTCCAGGGTAAT 28210115 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||| ||||||||||| |||||||| Sbjct 28210114 TGTCTTGCCAGTCAAGGTCTTTACAAAGATCTGCAT 28210079 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || ||||| || ||||| || |||||||| | ||| | | || Sbjct 27893375 CGGAGCACCAGGTGTAGGGTAGACTCCTTCTGGATGTTATAATCCGCCAGAGTGCGTCCA 27893434 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||||||||| || | || || ||||| || || || ||||| Sbjct 27893435 TCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTG 27893494 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || || || || || ||| || |||| || || Sbjct 27893495 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAAGATTCAACCTCCAGTGTAATG 27893554 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| ||||| |||||||| Sbjct 27893555 GTCTTCCCGGTCAAAGTCTTGACAAAGATCTGCAT 27893589 Score = 113 bits (124), Expect = 9e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | |||||| || || |||||||| || ||||| || | Sbjct 55138331 CCACCACGCAGACGAAGGACAAGGTGCAGGGTGGACTCTTTCTGAATGTTATAGTCTGCC 55138390 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || || | || || || || || ||||| || | || || |||||||| Sbjct 55138391 AAGGTGCGCCCATCGGCGAGCTGCTTCCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGA 55138450 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||||||||| || || || || || || || || || ||| | || || Sbjct 55138451 ATGCCCTCCTTATCTTGGATTTTCGCCTTCACGTTATCGATAGTGTCAGATGACTCAACC 55138510 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||||||||| | ||||| |||||||||||||| Sbjct 55138511 TCAAGAGTAATTGTCTTGCCTGTGAGGGTCTTCACAAATATCTGCAT 55138557 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || | ||| || || || || ||||| || || || || | || | | ||||| Sbjct 28209607 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTC 28209548 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || || || |||||||||||||| || | || || |||||||| || || ||||| || Sbjct 28209547 CTCAAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 28209488 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || |||||||| || || || || ||||| || | || || || | || || || Sbjct 28209487 CTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGT 28209428 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| ||||| |||||||| Sbjct 28209427 TTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 28209395 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || |||| || | | || Sbjct 28416250 CGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGGCCA 28416191 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || ||||||||||| || | || || || || || || || ||||| Sbjct 28416190 TCTTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 28416131 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| ||||| || || || || || || | || || Sbjct 28416130 TCCTGGATCTTCGCCTTGACATTGTCAATTGTGTCCGAAGACTCAACCTCGAGGGTGATG 28416071 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| |||||||| Sbjct 28416070 GTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 28416036 Score = 100 bits (110), Expect = 6e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || || | || | | || Sbjct 28416478 CGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCA 28416419 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||| || || || | || || ||||| || || |||||||| Sbjct 28416418 TCCTCAAGCTGCTTACCAGCGAATATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 28416359 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| ||||| || ||| | || ||||| | || || Sbjct 28416358 TCCTGGATCTTGGCCTTCACATTGTCAATAGTGTCAGATGACTCAACTTCAAGCGTGATG 28416299 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | ||||| || || |||||||| Sbjct 28416298 GTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 28416264 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| | ||| || || || || || || |||||||| || || ||||||| | Sbjct 26504421 CCACCCCTCAGCCTCAGCACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGCT 26504362 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||| || ||||| | ||| ||||||||||| ||||| ||||| ||||| || || Sbjct 26504361 AACGTTCGCCCATCTTCCAATTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCCGGGGGA 26504302 Query 82704 ATTCCTTCCTTATCTTGAA 82722 || || || || || |||| Sbjct 26504301 ATGCCCTCTTTGTCCTGAA 26504283 Score = 84.2 bits (92), Expect = 4e-11 Identities = 113/156 (72%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCA-GAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 || || || | ||||| | || | || ||||| || || ||||| | || | | || Sbjct 27860973 CGGAGCACCAGGTGCAAGGGTGGGCTCCTTCTGAATGTTGTAATCCGCATGAGTGCGGCC 27861032 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || || ||||||||||| | ||||| ||||| || || || | ||| Sbjct 27861033 ATCCTCGAGCTGCTTACCTGCAAAGATTAGGCGCTGTTGGTCTGGGGGAATGCCCTTCTT 27861092 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 ||||| |||||||| || ||||| |||||||| || Sbjct 27861093 GTCTTGGATCTTTGCCTTGACATTGTCAATCGTGTC 27861128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826847769492