Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq28 576 4e-160 seq4 563 3e-156 seq5 538 1e-148 seq1 435 9e-118 seq3 315 2e-81 >seq28 Length=135199 Score = 576 bits (638), Expect = 4e-160 Identities = 723/982 (74%), Gaps = 10/982 (1%) Strand=Plus/Minus Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570 |||||| | ||| || | || |||||||| | || ||||| || ||||||| Sbjct 1102 AACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 1043 Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629 || | || ||| || | |||| || ||||| || ||||| || || || ||||| Sbjct 1042 CC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 984 Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689 || |||||||| || ||||| || || || ||| | |||||||||||||| || || Sbjct 983 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 924 Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747 || || || | |||| | | || || |||||| | ||||| |||||||||||| Sbjct 923 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTTTACCCAATTTGG 866 Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 865 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 806 Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 19867 |||||| | |||| | | ||| ||||| || |||||||||||||| | || | Sbjct 805 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 746 Query 19868 GGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTC 19927 || ||| | ||||||||| |||||| || || ||||| |||||||| || |||| || Sbjct 745 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT- 687 Query 19928 TTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTC 19986 ||||| | | ||||| ||||||| || |||||||| |||| ||||||||| || || || Sbjct 686 TTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATC 627 Query 19987 GGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTT 20046 ||||| ||||||| ||| | |||||||| ||||| || ||||| || ||||| || || Sbjct 626 TGGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATT 567 Query 20047 CCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTC 20106 |||||| | ||||| |||||||| ||||| || || ||||||||||| ||||| ||||| Sbjct 566 TCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTC 507 Query 20107 GCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTT 20165 |||| || || | ||| | | || ||||||||| | ||| | || | |||| Sbjct 506 -CTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTT 448 Query 20166 ACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGAC 20225 |||| ||||| ||||| |||||||| ||||| || || || ||||||||||| ||||| | Sbjct 447 ACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCC 388 Query 20226 GTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTG 20285 | || ||||||||||| ||| ||||||||| |||||| ||||||||||| | |||| Sbjct 387 GATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTG 328 Query 20286 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 20345 | ||||| || ||||| || |||||| |||| || || || ||| |||||||| || | Sbjct 327 CTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACC 268 Query 20346 TGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTT 20405 | || || ||||| || ||||| || | | || | | ||||| || ||| |||||| Sbjct 267 TAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTT 208 Query 20406 GGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTC 20465 ||||||| || |||| ||||||||||| || | || || ||||| ||||| ||||||| Sbjct 207 GGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTC 148 Query 20466 ATAACTTCCCACTTGACCTTGC 20487 | |||||||| || || || || Sbjct 147 ACAACTTCCCTCTAGATCTAGC 126 >seq4 Length=48772488 Score = 563 bits (624), Expect = 3e-156 Identities = 720/982 (73%), Gaps = 10/982 (1%) Strand=Plus/Plus Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570 |||||| | ||| || | || |||||||| | || ||||| || ||||||| Sbjct 22675656 AACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 22675715 Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629 || | || ||| || | |||| || ||||| || ||||| || || || ||||| Sbjct 22675716 CC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 22675774 Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689 || |||||||| || ||||| || | || ||| | |||||||||||||| || || Sbjct 22675775 AGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTAT 22675834 Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747 || || || | |||| | | || || |||||| | ||||| |||||||||||| Sbjct 22675835 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTGTACCCAATTTGG 22675892 Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 22675893 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 22675952 Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 19867 |||||| | |||| | | ||| ||||| || |||||||||||||| | || | Sbjct 22675953 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 22676012 Query 19868 GGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTC 19927 || ||| | ||||||||| |||||| || || ||||| |||||||| || |||| || Sbjct 22676013 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGT- 22676071 Query 19928 TTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTC 19986 ||||| | | ||||| ||||||| || |||||||| |||| ||||||||| || || || Sbjct 22676072 TTTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATC 22676131 Query 19987 GGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTT 20046 ||||| ||||||| ||| | |||||||| || || || ||||| || ||||| || || Sbjct 22676132 TGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATT 22676191 Query 20047 CCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTC 20106 |||||| | ||||| |||||||| || || || || ||||||||||| ||||| ||||| Sbjct 22676192 TCACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTC 22676251 Query 20107 GCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTT 20165 |||| || || | ||| | | || ||||||||| | ||| | || | |||| Sbjct 22676252 -CTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTT 22676310 Query 20166 ACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGAC 20225 |||| ||||| ||||| |||||||| ||||| || || || ||||||||||| ||||| | Sbjct 22676311 ACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCC 22676370 Query 20226 GTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTG 20285 | || ||||||||||| ||| ||||||||| |||||| ||||||||||| | |||| Sbjct 22676371 GATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTG 22676430 Query 20286 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 20345 | ||||| || ||||| || |||||| |||| || || || ||| |||||||| || | Sbjct 22676431 CTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACC 22676490 Query 20346 TGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTT 20405 | || || ||||| || ||||| || | | || | | ||||| || ||| |||||| Sbjct 22676491 TAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTT 22676550 Query 20406 GGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTC 20465 ||||||| || |||| ||||||||||| || | || || ||||| ||||| ||||||| Sbjct 22676551 GGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTC 22676610 Query 20466 ATAACTTCCCACTTGACCTTGC 20487 | |||||||| || || || || Sbjct 22676611 ACAACTTCCCTCTAGATCTAGC 22676632 Score = 129 bits (142), Expect = 2e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20156 AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGT 20215 ||| | |||||||| ||||| ||||| |||||||| ||||| || || || |||||| | Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 20216 TACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTC 20275 || ||||| || || ||||||||||| ||| ||||||| | | |||| ||||||| Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTTT 45407059 Query 20276 TTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 20335 ||| | ||||| ||||| | ||||| || |||||| ||| || || || ||| ||| Sbjct 45407058 TTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTGATTTAGGTATTAGTACTATG 45406999 Query 20336 G 20336 | Sbjct 45406998 G 45406998 >seq5 Length=28563423 Score = 538 bits (596), Expect = 1e-148 Identities = 663/895 (74%), Gaps = 11/895 (1%) Strand=Plus/Minus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || ||||| || ||||| || || || ||||| || |||||||| || ||||| || || Sbjct 14559455 TTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTT 14559396 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 19715 || ||| | |||||||||||||| || || || || || | |||| | | || Sbjct 14559395 TCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCG 14559336 Query 19716 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCT 19775 || |||||| | ||||| ||||||||||| |||||| || |||||||||| | | Sbjct 14559335 --GCAATCGGATTGCACTTTTACCCAATTTGAGAAGCTGCATCCGTTGATGAATGATTAT 14559278 Query 19776 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACA 19835 |||| || || || | | || | || | |||||| | |||| | | ||| | Sbjct 14559277 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATA 14559218 Query 19836 TGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCT 19895 |||| || |||||||||||||| | || | || ||| ||||||||| |||||| | Sbjct 14559217 TGGGTCGTGAGTGGGAACTTAGTTTCCGTTT-GGTATGCACCCTTGGATTGTTGTTGCAT 14559159 Query 19896 ACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGT 19954 | || ||||| |||||||| || |||| || ||||| | | ||||| ||||||| || Sbjct 14559158 ATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTTGATTTACCCTATTGGTCAAGGA 14559100 Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014 |||||||| |||| ||||||||| || || || ||||| || |||| ||| | |||||| Sbjct 14559099 AGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTAAACTTTATGATTGTATTC 14559040 Query 20015 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTC 20074 || || || || ||||| || ||||| | ||| ||||| | ||||| |||||||| ||| Sbjct 14559039 CAGGCAGAGCACAACATCCTTATGCATCATTTC-ACATGTTAGGTGTAGCTGGTGTTTTC 14558981 Query 20075 GGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGA 20133 || || || ||||||||||| ||||| ||||| | || || || | | ||| | | || Sbjct 14558980 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGA 14558922 Query 20134 GACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTA 20193 ||||||||| | ||| | || | |||||||| ||||| ||||| |||||||| || Sbjct 14558921 AACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTA 14558862 Query 20194 TAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAA 20253 ||| || || || ||||||||||| ||||| || || ||||||||||| ||| |||||| Sbjct 14558861 TAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAA 14558802 Query 20254 CAA-TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCG 20312 ||| | | ||||| ||||||||||| | ||||| ||||| || ||||| || |||||| Sbjct 14558801 CAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTTCA 14558742 Query 20313 CTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCC 20372 |||| || || || ||| |||| ||| || || || || ||||| || ||||| || Sbjct 14558741 CTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGGATTCAATTTCAACCAATCTG 14558682 Query 20373 TTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATC 20432 | | || | | |||||||| ||| ||||||||||||| || |||| |||||||||| Sbjct 14558681 TAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATC 14558622 Query 20433 TCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 | || | || || ||||| ||||| |||||||| |||||||| || || || || Sbjct 14558621 TTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAGC 14558567 >seq1 Length=75119905 Score = 435 bits (482), Expect = 9e-118 Identities = 516/692 (75%), Gaps = 8/692 (1%) Strand=Plus/Minus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || ||||| || ||||| || || || ||||| || |||||||| || ||||| || || Sbjct 3929605 TTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTT 3929546 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 19715 || ||| | |||||||||||||| || || || || || | |||| | | || Sbjct 3929545 TCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCG 3929486 Query 19716 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCT 19775 || |||||| | ||||| |||||||||||||||||| || ||||||||||| | | Sbjct 3929485 --GCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGATGAATGGTTAT 3929428 Query 19776 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACA 19835 |||| || || || | | || | || | |||||| | |||| | | ||| | Sbjct 3929427 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATA 3929368 Query 19836 TGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCT 19895 |||| || |||||||||||||| | || | || ||| | ||||||||| |||||| | Sbjct 3929367 TGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCAT 3929308 Query 19896 ACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGT 19954 | || ||||| |||||||| || |||| || ||||| | | ||||| ||||||| || Sbjct 3929307 ATTCAGCTCCTGTTGCAGCTGCGACTGCTGT-TTTCTTGATTTACCCTATTGGTCAAGGA 3929249 Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014 |||||||| |||| ||||||||| || || || ||||| ||||||| ||| | |||||| Sbjct 3929248 AGCTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTC 3929189 Query 20015 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTC 20074 || || || || ||||| || ||||| || || |||||| | ||||| |||||||| ||| Sbjct 3929188 CAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTTTTC 3929129 Query 20075 GGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGA 20133 || || || ||||||||||| ||||| ||||| |||| || || | ||| | | || Sbjct 3929128 GGCGGTTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACCTCTAGTTTGATCAGGGA 3929070 Query 20134 GACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTA 20193 ||||||||| | ||| | || | |||||||| ||||| ||||| |||||||| || Sbjct 3929069 AACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTA 3929010 Query 20194 TAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAA 20253 ||| || || || ||||||||||| ||||| || || ||||||||||| ||| |||||| Sbjct 3929009 TAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAA 3928950 Query 20254 CAATAGCCGTTCTCTACACTTCTTCCTTGCTG 20285 ||| |||||| ||||||||||| | |||| Sbjct 3928949 CAACTCTCGTTCTTTACACTTCTTCTTGGCTG 3928918 >seq3 Length=59935730 Score = 315 bits (348), Expect = 2e-81 Identities = 336/441 (76%), Gaps = 2/441 (0%) Strand=Plus/Plus Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107 |||||| | ||||| |||||||| ||||| || || ||||||||||| ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTA 20166 | || || || | | ||| | | || ||||||||| | ||| | || | ||||| Sbjct 16821757 TTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 16821815 Query 20167 CAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACG 20226 ||| ||||| ||||| |||||||| ||||| || || || ||||||||||| ||||| || Sbjct 16821816 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 16821875 Query 20227 TTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGC 20286 || ||||||||||| ||| ||||||||| |||||| ||||||||||| | ||||| Sbjct 16821876 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 16821935 Query 20287 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 20346 ||||| || ||||| || |||||| |||| || || || ||| |||||||| || || Sbjct 16821936 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 16821995 Query 20347 GAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTG 20406 || || ||||| || ||||| || | | || | | ||||| || ||| ||||||| Sbjct 16821996 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 16822055 Query 20407 GGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCA 20466 |||||| || |||| ||||||||||| || | || || ||||| ||||| |||||||| Sbjct 16822056 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 16822115 Query 20467 TAACTTCCCACTTGACCTTGC 20487 |||||||| || || || || Sbjct 16822116 CAACTTCCCTCTAGATCTAGC 16822136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148828750514424