Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq28 517 3e-142 seq4 504 2e-138 seq5 479 8e-131 seq1 369 1e-97 seq3 298 2e-76 >seq28 Length=135199 Score = 517 bits (572), Expect = 3e-142 Identities = 711/986 (72%), Gaps = 16/986 (2%) Strand=Plus/Minus Query 28639 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 28698 |||||| | ||| || | || |||||||| | || ||||| || ||||||| Sbjct 1102 AACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 1043 Query 28699 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGT 28757 || | || ||| || | |||| || ||||| || ||||| || || || ||||| Sbjct 1042 CC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 984 Query 28758 TGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 || |||||||| || ||||| ||||| |||| | | || ||||||||||| || || Sbjct 983 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 924 Query 28818 ATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 28875 || || || | | || | | || || |||||| | ||||| |||||||||||| Sbjct 923 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTTTACCCAATTTGG 866 Query 28876 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 28935 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 865 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 806 Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 805 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 746 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| ||| Sbjct 745 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 686 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGG----TTCTTTTAGCGACGCGATGCCTTTGGGTAT 29111 ||| | | ||||| | |||||||| |||| | || | |||||||| || || Sbjct 685 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCT----GATGGTATGCCTTTAGGAAT 630 Query 29112 TTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCC 29171 || || || ||||||| ||| | || ||||| ||||| || ||||| || ||||| || Sbjct 629 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCC 570 Query 29172 GTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGG 29231 || |||||| | || || ||||| || ||||| || || ||||| ||||| ||||| || Sbjct 569 ATTTCACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGG 510 Query 29232 TTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATG 29290 ||| | || || || | | ||| | | || || |||||| | ||| || | | Sbjct 509 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 451 Query 29291 GTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTG 29350 ||||||| ||||| ||||| |||||||||||||| || || || ||||| ||||| |||| Sbjct 450 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 391 Query 29351 GACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTG 29410 | || || ||||||||||||||| |||||| || |||||| ||||||||||| | | Sbjct 390 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 331 Query 29411 CTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTA 29470 |||| ||||| || ||||| || |||||| |||| || || || ||| |||||||| | Sbjct 330 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCA 271 Query 29471 ATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATA 29530 | || || || || || || ||||| || | | || | | ||||| || ||||||| Sbjct 270 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 211 Query 29531 CTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATG 29590 ||||||||||| | |||| || ||||| || || | ||||||||||| || ||||||| Sbjct 210 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 151 Query 29591 CTCATAACTTCCCACTTGATCTGGCT 29616 |||| |||||||| || ||||| ||| Sbjct 150 CTCACAACTTCCCTCTAGATCTAGCT 125 >seq4 Length=48772488 Score = 504 bits (558), Expect = 2e-138 Identities = 708/986 (72%), Gaps = 16/986 (2%) Strand=Plus/Plus Query 28639 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 28698 |||||| | ||| || | || |||||||| | || ||||| || ||||||| Sbjct 22675656 AACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 22675715 Query 28699 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGT 28757 || | || ||| || | |||| || ||||| || ||||| || || || ||||| Sbjct 22675716 CC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 22675774 Query 28758 TGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 || |||||||| || ||||| ||| | |||| | | || ||||||||||| || || Sbjct 22675775 AGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTAT 22675834 Query 28818 ATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 28875 || || || | | || | | || || |||||| | ||||| |||||||||||| Sbjct 22675835 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTGTACCCAATTTGG 22675892 Query 28876 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 28935 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 22675893 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 22675952 Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 22675953 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 22676012 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| ||| Sbjct 22676013 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 22676072 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGG----TTCTTTTAGCGACGCGATGCCTTTGGGTAT 29111 ||| | | ||||| | |||||||| |||| | || | |||||||| || || Sbjct 22676073 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCT----GATGGTATGCCTTTAGGAAT 22676128 Query 29112 TTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCC 29171 || || || ||||||| ||| | || ||||| || || || ||||| || ||||| || Sbjct 22676129 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 22676188 Query 29172 GTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGG 29231 || |||||| | || || ||||| || || || || || ||||| ||||| ||||| || Sbjct 22676189 ATTTCACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGG 22676248 Query 29232 TTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATG 29290 ||| | || || || | | ||| | | || || |||||| | ||| || | | Sbjct 22676249 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 22676307 Query 29291 GTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTG 29350 ||||||| ||||| ||||| |||||||||||||| || || || ||||| ||||| |||| Sbjct 22676308 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 22676367 Query 29351 GACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTG 29410 | || || ||||||||||||||| |||||| || |||||| ||||||||||| | | Sbjct 22676368 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 22676427 Query 29411 CTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTA 29470 |||| ||||| || ||||| || |||||| |||| || || || ||| |||||||| | Sbjct 22676428 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCA 22676487 Query 29471 ATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATA 29530 | || || || || || || ||||| || | | || | | ||||| || ||||||| Sbjct 22676488 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 22676547 Query 29531 CTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATG 29590 ||||||||||| | |||| || ||||| || || | ||||||||||| || ||||||| Sbjct 22676548 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22676607 Query 29591 CTCATAACTTCCCACTTGATCTGGCT 29616 |||| |||||||| || ||||| ||| Sbjct 22676608 CTCACAACTTCCCTCTAGATCTAGCT 22676633 Score = 129 bits (142), Expect = 2e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 29284 AACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGT 29343 ||| | |||||||| ||||| ||||| |||||||||||||| || || || ||||| | Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 29344 TACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTC 29403 || ||||| || || ||||||||||||||| |||||| | | |||| ||||||| Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTTT 45407059 Query 29404 TTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 29463 ||| | ||||| ||||| | ||||| || |||||| ||| || || || ||| ||| Sbjct 45407058 TTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTTCACTGATTTAGGTATTAGTACTATG 45406999 Query 29464 G 29464 | Sbjct 45406998 G 45406998 >seq5 Length=28563423 Score = 479 bits (530), Expect = 8e-131 Identities = 651/899 (72%), Gaps = 17/899 (2%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || ||||| || ||||| || || || ||||| || |||||||| || ||||| ||||| Sbjct 14559455 TTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTT 14559396 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCA 28843 |||| | | || ||||||||||| || || || || || | | || | | || Sbjct 14559395 TCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCG 14559336 Query 28844 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 28903 || |||||| | ||||| ||||||||||| |||||| || |||||||||| | | Sbjct 14559335 --GCAATCGGATTGCACTTTTACCCAATTTGAGAAGCTGCATCCGTTGATGAATGATTAT 14559278 Query 28904 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACA 28963 |||| || || || | | || | || | |||||| | |||| || | ||| | Sbjct 14559277 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATA 14559218 Query 28964 TGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCAT 29023 |||| || |||||||||||||| | || | || ||| || |||||| ||| |||| Sbjct 14559217 TGGGTCGTGAGTGGGAACTTAGTTTCCGTTT-GGTATGCACCCTTGGATTGTTGTTGCAT 14559159 Query 29024 ACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGG-- 29081 | |||||||| || ||||| || |||| |||||| | | ||||| | |||||||| Sbjct 14559158 ATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAA 14559099 Query 29082 --TTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTG 29139 |||| | || | |||||||| || || || || || || |||| ||| | || Sbjct 14559098 GCTTCTCT----GATGGTATGCCTTTAGGAATATCTGGTACTTTAAACTTTATGATTGTA 14559043 Query 29140 TTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTG 29199 ||||| || || || ||||| || ||||| | ||| ||||| | || || ||||| || Sbjct 14559042 TTCCAGGCAGAGCACAACATCCTTATGCATCATTTC-ACATGTTAGGTGTAGCTGGTGTT 14558984 Query 29200 TTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGC-G 29258 ||||| || || ||||| ||||| ||||| ||||| | || || || | | ||| | | Sbjct 14558983 TTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAG 14558925 Query 29259 TGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGAC 29318 || || |||||| | ||| || | |||||||| ||||| ||||| |||||||| Sbjct 14558924 GGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGAC 14558865 Query 29319 TTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTT 29378 |||||| || || || ||||| ||||| ||||| || || ||||||||||||||| ||| Sbjct 14558864 TTATAATATTGTGGCGGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 14558805 Query 29379 CAATAA-TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGT 29437 ||| || | | ||||| ||||||||||| | ||||| ||||| || ||||| || |||| Sbjct 14558804 CAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGT 14558745 Query 29438 TCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGT 29497 || |||| || || || ||| |||| ||| || || || || || || || ||||| | Sbjct 14558744 TCACTGCTTTAGGTATTAGTACTATGGGGTTCAACCTAAATGGATTCAATTTCAACCAAT 14558685 Query 29498 CGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTA 29557 | | | || | | |||||||| |||||||||||||||||| | |||| || |||| Sbjct 14558684 CTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGATATCATCAACCGTGCTA 14558625 Query 29558 ACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 | || || | ||||||||||| || ||||||||||| |||||||| || ||||| ||| Sbjct 14558624 ATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAGCT 14558566 >seq1 Length=75119905 Score = 369 bits (408), Expect = 1e-97 Identities = 502/695 (72%), Gaps = 14/695 (2%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || ||||| || ||||| || || || ||||| || |||||||| || ||||| ||||| Sbjct 3929605 TTTATTATCGCCTTCATCGCAGCCCCTCCAGTAGATATTGATGGTATTCGCGAGCCTGTT 3929546 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCA 28843 |||| | | || ||||||||||| || || || || || | | || | | || Sbjct 3929545 TCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCG 3929486 Query 28844 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 28903 || |||||| | ||||| |||||||||||||||||| || ||||||||||| | | Sbjct 3929485 --GCAATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCCGTTGATGAATGGTTAT 3929428 Query 28904 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACA 28963 |||| || || || | | || | || | |||||| | |||| || | ||| | Sbjct 3929427 ACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATA 3929368 Query 28964 TGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCAT 29023 |||| || |||||||||||||| | || | || ||| | || |||||| ||| |||| Sbjct 3929367 TGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCAT 3929308 Query 29024 ACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGG-- 29081 | |||||||| || ||||| || |||| |||||| | | ||||| | |||||||| Sbjct 3929307 ATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAA 3929248 Query 29082 --TTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTG 29139 |||| | || | |||||||| || || || || || ||||||| ||| | || Sbjct 3929247 GCTTCTCT----GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTA 3929192 Query 29140 TTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTG 29199 ||||| || || || ||||| || ||||| || || |||||| | || || ||||| || Sbjct 3929191 TTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTT 3929132 Query 29200 TTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCG 29258 ||||| || || ||||| ||||| ||||| ||||| | || || | || | ||| | | Sbjct 3929131 TTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCT-CTAGTTTGATCAG 3929073 Query 29259 TGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGAC 29318 || || |||||| | ||| || | |||||||| ||||| ||||| |||||||| Sbjct 3929072 GGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGAC 3929013 Query 29319 TTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTT 29378 |||||| || || || ||||| ||||| ||||| || || ||||||||||||||| ||| Sbjct 3929012 TTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 3928953 Query 29379 CAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 ||| || |||||| ||||||||||| | |||| Sbjct 3928952 CAACAACTCTCGTTCTTTACACTTCTTCTTGGCTG 3928918 >seq3 Length=59935730 Score = 298 bits (330), Expect = 2e-76 Identities = 333/442 (75%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCG 29235 |||||| | || || ||||| || ||||| || || ||||| ||||| ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 29236 CTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTA 29294 | || || || | | ||| | | || || |||||| | ||| || | ||||| Sbjct 16821757 TTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 16821815 Query 29295 CAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACG 29354 ||| ||||| ||||| |||||||||||||| || || || ||||| ||||| ||||| || Sbjct 16821816 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 16821875 Query 29355 TTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGC 29414 || ||||||||||||||| |||||| || |||||| ||||||||||| | ||||| Sbjct 16821876 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 16821935 Query 29415 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 29474 ||||| || ||||| || |||||| |||| || || || ||| |||||||| || || Sbjct 16821936 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 16821995 Query 29475 GAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTG 29534 || || || || || ||||| || | | || | | ||||| || ||||||||||| Sbjct 16821996 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 16822055 Query 29535 GGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCA 29594 ||||||| | |||| || ||||| || || | ||||||||||| || ||||||||||| Sbjct 16822056 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 16822115 Query 29595 TAACTTCCCACTTGATCTGGCT 29616 |||||||| || ||||| ||| Sbjct 16822116 CAACTTCCCTCTAGATCTAGCT 16822137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146665551233688