Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq28 618 1e-172 seq4 609 7e-170 seq5 576 4e-160 seq1 484 2e-132 seq3 316 6e-82 >seq28 Length=135199 Score = 618 bits (684), Expect = 1e-172 Identities = 732/982 (75%), Gaps = 10/982 (1%) Strand=Plus/Minus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || || |||||||| ||||| ||||| || ||||||| | Sbjct 1101 ACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCC 1042 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | ||| || ||||| |||||||| || || ||||| || Sbjct 1041 C-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 984 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || |||||||||||| | || | | |||||||||||||| || || Sbjct 983 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 924 Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || || | |||| | | || || |||||| | ||||| |||||||||||| Sbjct 923 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTTTACCCAATTTGG 866 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 865 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 806 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 805 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 746 Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146 || ||||||||||||||| |||||| || |||||||||||||| || || |||| || Sbjct 745 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 686 Query 19147 TTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206 ||| | | || || |||||||||| ||| || | ||||||||| || || | Sbjct 685 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCT 626 Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| ||||||| ||| ||||||||||||| || || |||||||| ||||| || || Sbjct 625 GGTACTTTCAACTTTATGATTGTATTCCAGGCCGAGCACAACATCCTTATGCATCCATTT 566 Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 565 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTC- 507 Query 19327 CTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 |||| || || | ||| | | |||||||||||| | | |||| || | || || Sbjct 506 CTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 447 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 ||| ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| || Sbjct 446 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 387 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGC 19505 | || ||||| || || |||||||| |||||| |||| ||||| |||||||| Sbjct 386 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 327 Query 19506 TTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTT 19565 ||||||||| || || || ||||| | || | || | || || ||||| |||||| | Sbjct 326 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 267 Query 19566 GAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTG 19625 ||||| || || || ||||| || | |||| | | ||||| || ||| ||||||| Sbjct 266 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 207 Query 19626 GGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCA 19685 |||||| || |||| |||||||| || || | || ||||||||||||||||||||||| Sbjct 206 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 147 Query 19686 TAACTTCCCACTTGATTTGGCT 19707 |||||||| || ||| | ||| Sbjct 146 CAACTTCCCTCTAGATCTAGCT 125 >seq4 Length=48772488 Score = 609 bits (674), Expect = 7e-170 Identities = 730/982 (74%), Gaps = 10/982 (1%) Strand=Plus/Plus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || || |||||||| ||||| ||||| || ||||||| | Sbjct 22675657 ACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCC 22675716 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | ||| || ||||| |||||||| || || ||||| || Sbjct 22675717 C-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 22675774 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || ||||||||| || | || | | |||||||||||||| || || Sbjct 22675775 AGATATTGATGGTATTCGCGAGCCTATTTCTGGTTCTTTACTTTATGGAAACAATATTAT 22675834 Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || || | |||| | | || || |||||| | ||||| |||||||||||| Sbjct 22675835 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTGTACCCAATTTGG 22675892 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 22675893 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 22675952 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 22675953 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 22676012 Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146 || ||||||||||||||| |||||| || |||||||||||||| || || |||| || Sbjct 22676013 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 22676072 Query 19147 TTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206 ||| | | || || |||||||||| ||| || | ||||||||| || || | Sbjct 22676073 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCT 22676132 Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| ||||||| ||| ||||||||||||| || || |||||||| ||||| || || Sbjct 22676133 GGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTT 22676192 Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 |||||| | ||||| |||||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 22676193 CACATGTTAGGTGTAGCTGGTGTTTTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTC- 22676251 Query 19327 CTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 |||| || || | ||| | | |||||||||||| | | |||| || | || || Sbjct 22676252 CTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 22676311 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 ||| ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| || Sbjct 22676312 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 22676371 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGC 19505 | || ||||| || || |||||||| |||||| |||| ||||| |||||||| Sbjct 22676372 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 22676431 Query 19506 TTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTT 19565 ||||||||| || || || ||||| | || | || | || || ||||| |||||| | Sbjct 22676432 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 22676491 Query 19566 GAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTG 19625 ||||| || || || ||||| || | |||| | | ||||| || ||| ||||||| Sbjct 22676492 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 22676551 Query 19626 GGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCA 19685 |||||| || |||| |||||||| || || | || ||||||||||||||||||||||| Sbjct 22676552 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 22676611 Query 19686 TAACTTCCCACTTGATTTGGCT 19707 |||||||| || ||| | ||| Sbjct 22676612 CAACTTCCCTCTAGATCTAGCT 22676633 Score = 113 bits (124), Expect = 1e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 19375 AACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGG 19434 ||| | || ||||| ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 45407178 AACGAGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATATT 45407119 Query 19435 TATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTC 19494 |||||||| || | || ||||| || || |||||| | | |||| |||| || Sbjct 45407118 TATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACGACTCTCCTTCTTTACACTTT 45407059 Query 19495 TTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTT 19529 || |||||||||||||||| || || || ||||| Sbjct 45407058 TTCTTGGCTGCTTGGCCTGCAGTAGGAATCTGGTT 45407024 >seq5 Length=28563423 Score = 576 bits (638), Expect = 4e-160 Identities = 726/983 (74%), Gaps = 13/983 (1%) Strand=Plus/Minus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || || |||||||| ||| | ||||| || ||||||| | Sbjct 14559541 ACTGGATAACTAGCACTGAAAATCGTCTTTACATCAGATGGTTCGGTGTTTTGATGATCC 14559482 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | ||| || ||||| |||||||| || || ||||| || Sbjct 14559481 C-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 14559424 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || |||||||||||| | || | | |||||||||||||| || || Sbjct 14559423 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 14559364 Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || || | |||| | | || || |||||| | ||||| ||||||||||| Sbjct 14559363 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTTTACCCAATTTGA 14559306 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 |||||| || |||||||||| | ||||| || || || | | || | || | Sbjct 14559305 GAAGCTGCATCCGTTGATGAATGATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 14559246 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 14559245 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTT- 14559187 Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146 || |||| |||||||||| |||||| || |||||||||||||| || || |||| || Sbjct 14559186 GGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 14559127 Query 19147 TTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206 ||| | | || || |||||||||| ||| || | ||||||||| || || | Sbjct 14559126 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCT 14559067 Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| || |||| ||| ||||||||||||| || || |||||||| ||||| | ||| Sbjct 14559066 GGTACTTTAAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCATTTC 14559007 Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 ||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 14559006 -ACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 14558948 Query 19327 CTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 | || || || | | ||| | | |||||||||||| | | |||| || | || || Sbjct 14558947 TTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 14558889 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 ||| ||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| || Sbjct 14558888 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCGGCTCATGGTTATTTTGGCCG 14558829 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAA-TAGCCGTTCTCTACATTTCTTTTTGGCTG 19504 | || ||||| || || |||||||| | | ||||| |||| ||||| ||||||| Sbjct 14558828 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCTGTTCTTTACACTTCTTCTTGGCTG 14558769 Query 19505 CTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACT 19564 |||||||||| || || || ||||| | || | || | || || |||| |||||| Sbjct 14558768 CTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGGGTTCAACC 14558709 Query 19565 TGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTT 19624 | ||||| || || || ||||| || | |||| | | |||||||| ||| |||||| Sbjct 14558708 TAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTT 14558649 Query 19625 GGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTC 19684 ||||||| || |||| |||||||| || || | || |||||||||||||||||||||| Sbjct 14558648 GGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTC 14558589 Query 19685 ATAACTTCCCACTTGATTTGGCT 19707 | |||||||| || ||| | ||| Sbjct 14558588 ACAACTTCCCTCTAGATCTAGCT 14558566 >seq1 Length=75119905 Score = 484 bits (536), Expect = 2e-132 Identities = 586/788 (74%), Gaps = 10/788 (1%) Strand=Plus/Minus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || || |||||||| ||||| ||||| || ||||||| | Sbjct 3929691 ACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCC 3929632 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| ||||| || ||||| |||||||| || || ||||| || Sbjct 3929631 C-TACCTTATTGACCGCAACT-TTTGTATTTATTATCGCCTTCATCGCAGCCCCTCCAGT 3929574 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || |||||||||||| | || | | |||||||||||||| || || Sbjct 3929573 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 3929514 Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || || | |||| | | || || |||||| | ||||| |||||||||||| Sbjct 3929513 CTCTGGTGCTATTATTCCTACTTCTGCG--GCAATCGGATTGCACTTTTACCCAATTTGG 3929456 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 3929455 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 3929396 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086 |||||| | |||| || | ||| ||||| || |||||||||||||| | || | Sbjct 3929395 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTG 3929336 Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146 || ||||||||||||||| |||||| || |||||||||||||| || || |||| || Sbjct 3929335 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTT 3929276 Query 19147 TTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206 ||| | | || || |||||||||| ||| || | ||||||||| || || | Sbjct 3929275 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGAATATCT 3929216 Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| ||||||| ||| ||||||||||||| || || |||||||| ||||| || || Sbjct 3929215 GGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTT 3929156 Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 3929155 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTC- 3929097 Query 19327 CTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 |||| || || | ||| | | |||||||||||| | | |||| || | || || Sbjct 3929096 CTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 3929037 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 ||| ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| || Sbjct 3929036 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 3928977 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGC 19505 | || ||||| || || |||||||| |||||| |||| ||||| ||||||| Sbjct 3928976 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGT 3928917 Query 19506 TTGGCCTG 19513 | || ||| Sbjct 3928916 TAGGTCTG 3928909 Score = 80.6 bits (88), Expect = 8e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 19051 TACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTT 19110 || ||||| || |||||||||||||| | || || || ||||| ||||||||| |||| Sbjct 40130297 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTT 40130356 Query 19111 GCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTC 19149 || || ||||||||| |||| || || ||| || ||| Sbjct 40130357 GCATATTCAGCTCCTATTGCAGCGGCGACTGTTGTTTTC 40130395 >seq3 Length=59935730 Score = 316 bits (350), Expect = 6e-82 Identities = 337/442 (76%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 16821697 CACATGTTAGGTGTAGCTGGTGTTTTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 16821756 Query 19327 CTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 | || || || | | ||| | | |||||||||||| | | |||| || | || || Sbjct 16821757 TTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 16821815 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 ||| ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| || Sbjct 16821816 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 16821875 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGC 19505 | || ||||| || || |||||||| |||||| |||| ||||| |||||||| Sbjct 16821876 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 16821935 Query 19506 TTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTT 19565 ||||||||| || || || ||||| | || | || | || || ||||| |||||| | Sbjct 16821936 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCGTTCAACCT 16821995 Query 19566 GAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTG 19625 ||||| || || || ||||| || | |||| | | ||||| || ||| ||||||| Sbjct 16821996 AAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTG 16822055 Query 19626 GGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCA 19685 |||||| || |||| |||||||| || || | || ||||||||||||||||||||||| Sbjct 16822056 GGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 16822115 Query 19686 TAACTTCCCACTTGATTTGGCT 19707 |||||||| || ||| | ||| Sbjct 16822116 CAACTTCCCTCTAGATCTAGCT 16822137 Score = 107 bits (118), Expect = 5e-19 Identities = 133/177 (75%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || || | |||||| ||||| |||||||| ||||||| | Sbjct 15391374 ACTGGATAACTAGCACTGAAAATCATCTTTACATCGGATGGTTTGGTGTTTTGATGATCC 15391315 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | ||| || ||||| ||||| || || || ||||| || Sbjct 15391314 C-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTAATCGCAGCCCCTCCAGT 15391257 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACAT 18905 ||| |||||||| || |||||||||||| | || | | |||||||||||||| || Sbjct 15391256 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATAT 15391200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148753068024