Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=75119905 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 |||||||| ||| ||||| ||||| |||||||| |||| ||| || || ||||||||| Sbjct 26504288 GACAAAGAGGGCATTCCCCCGGATCAGCAAAGGCTAATTTTTGCTGGAAAGCAATTGGAA 26504347 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| ||| | || ||||| || || || ||||| || || || ||||| ||| || Sbjct 26504348 GATGGGCGAACGTTAGCTGATTACAACATTCAGAAAGAGTCGACGCTCCATTTGGTGCTG 26504407 Query 111313 CGTCTGCGCGGTGG 111326 | ||| | ||||| Sbjct 26504408 AGGCTGAGGGGTGG 26504421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421811056056928