Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-14
seq7 89.7 4e-13
>seq2
Length=243061704
Score = 93.3 bits (102), Expect = 3e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 20430 CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489
||| |||||||||| ||| || | || || || ||||||||||| || || || ||
Sbjct 49653020 CCAGTTTTACGTTGAGAATGGGGAGCTATCCTGCCAGATGTATCAACGCTCTGCAGACAT 49652961
Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549
|||||| |||||||| ||||| |||||| ||| | || || || ||||||||||| ||
Sbjct 49652960 GGGACTTGGTGTTCCATTCAACATTGCATCGTATTCTCTTCTCACATATATGATTGCTCA 49652901
Query 20550 TGTT 20553
|||
Sbjct 49652900 AGTT 49652897
>seq7
Length=154015841
Score = 89.7 bits (98), Expect = 4e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 20430 CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489
||| |||||||||| ||| || | || || || ||||||||||| || || || ||
Sbjct 4014136 CCAGTTTTACGTTGAGAATGGGGAGCTATCCTGCCAGATGTATCAACGCTCTGCAGACAT 4014077
Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549
|||||| |||||||| ||||| |||||| ||| | || || || || |||||||| ||
Sbjct 4014076 GGGACTTGGTGTTCCATTCAACATTGCATCGTATTCTCTTCTCACATACATGATTGCTCA 4014017
Query 20550 TGTT 20553
|||
Sbjct 4014016 AGTT 4014013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399084806393605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |