Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8759 89.7 5e-13 >seq8759 Length=1216561 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 156877 ATCGGCCAAACCTTGAATGCCAATGCCGATGGGACGATGGCGCATATTAGAtttttttGC 156936 ||||||||| ||||||| ||| ||||| || || | || |||||||| ||| | ||||| Sbjct 960069 ATCGGCCAAGCCTTGAACGCCTATGCCAATTGGCCTGTGACGCATATTTGATCTCTTTGC 960010 Query 156937 AGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATT 156975 ||| |||| ||| ||| |||| |||||||||||| || Sbjct 960009 AGTCTCAACAGGATAGTAATTAATATCAATAATTTTGTT 959971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506885181042480