Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 149 1e-30
seq5 140 7e-28
seq6 131 4e-25
seq4 125 2e-23
seq7 116 9e-21
>seq3
Length=300915289
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | || || | || | ||||| || ||||| ||||| |||||
Sbjct 25197654 ATTCCTCCTCGAAGGCGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCT 25197595
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | ||| || || || || ||||| ||||| || |||||||| ||||||||
Sbjct 25197594 GCCAGAGTACGACCATCCTCAAGCTGCTTTCCCGCAAAGATGAGCCTCTGCTGATCAGGT 25197535
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || |||||||||||||| || || ||||| || | ||| || | ||
Sbjct 25197534 GGGATTCCCTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCTGAACTCTCC 25197475
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| || || || || || ||||||||||||||
Sbjct 25197474 ACCTCAAGAGTTATCGTCTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 25197425
Score = 140 bits (154), Expect = 7e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || |||||||||
Sbjct 25197426 ATGCCACCTCTCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCA 25197367
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||| || || || || || |||||||| || |||||||| ||||| |||
Sbjct 25197366 GCCAGTGTCCGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCCGGA 25197307
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || |||||||||||||| || || ||||| || | || ||| || | ||
Sbjct 25197306 GGGATACCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATAGTGTCGG-AGCTCTC 25197248
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| || || || || || ||||||||||||||
Sbjct 25197247 AACCTCCAAAGTGATGGTCTTCCCTGTGAGAGTCTTGACAAATATCTGCAT 25197197
Score = 131 bits (144), Expect = 4e-25
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || ||||| ||||| || || || || | | || | |||||| ||
Sbjct 25198317 ACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAATCTGCCAATGTACGACCGTCCTCC 25198258
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| || || |||||||| || |||||||||||||| ||||| || || || || |||||
Sbjct 25198257 AGCTGCTTCCCAGCAAAGATGAGCCTCTGTTGATCTGGAGGAATCCCCTCCTTGTCCTGG 25198198
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| ||||||||||| || | ||| || ||| ||| ||||| || || || |||
Sbjct 25198197 ATCTTGGCTTTTACATTATCAATGGTGTCAGAGCT--CTTC-ACCTCCAGGGTGATGGTC 25198141
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| | || || ||||| ||||||||
Sbjct 25198140 TTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 25198109
Score = 122 bits (134), Expect = 2e-22
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| |||||||| ||||| || |||| | || | ||||| || | || ||||||
Sbjct 25197849 GTAGACTCTTTCTGGATATTGTAATCAGCCAATGTGCGTCCGTCCTCCGGCTGCTTTCCA 25197790
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || ||||| ||||| |||||||| ||
Sbjct 25197789 GCAAAGATGAGTCGCTGCTGGTCTGGCGGGATGCCCTCTTTGTCCTGGATCTTTGCCTTG 25197730
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| || || | || || || || || |||||||| | |||||||||
Sbjct 25197729 ACATTGTCAATGGTGTC-AGAGCTCTCAACTTCCAGAGTGATAGTCTTCCTAGTAAGTGT 25197671
Query 104542 TTTTACAAATATCTGCATT 104560
|| ||||| || ||||||
Sbjct 25197670 CTTCACAAAGATATGCATT 25197652
>seq5
Length=158699395
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| |||||||| || || || | ||||| ||||||||||| || ||||||
Sbjct 71681763 ATGCCACCTCTCAGCCTAAGCACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCA 71681822
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || ||||||||||| || || | ||| ||||| ||
Sbjct 71681823 GCTAAGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGG 71681882
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || |||||||| || || ||||| || | || || || ||
Sbjct 71681883 GGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATTGTGTCTGAAGACTCA 71681942
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| | || || ||||| ||||||||
Sbjct 71681943 ACCTCCAGCGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 71681992
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| |||||||| || || || | ||||| ||||||||||| || || |||
Sbjct 71676930 ATGCCACCTCTCAGCCTAAGCACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCA 71676989
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || || || ||||||||||| || || | ||| ||||| ||
Sbjct 71676990 GCTAAGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGG 71677049
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || |||||||| || || ||||| || | || || || ||
Sbjct 71677050 GGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATTGTGTCTGAAGACTCA 71677109
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| | || || ||||| ||||||||
Sbjct 71677110 ACCTCCAGCGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 71677159
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | ||| || || |||| || || ||||||||||| || ||||||
Sbjct 71677158 ATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTCA 71677217
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | || || || || || || |||||||| || | || ||| || || |||
Sbjct 71677218 GCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGGA 71677277
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||||||||||||||| ||||| || | || || | ||
Sbjct 71677278 GGGATCCCTTCCTTGTCCTGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGACTCA 71677337
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||| || || || || || ||||| ||||||||
Sbjct 71677338 ACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71677387
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | ||| || || |||| || || ||||||||||| || ||||||
Sbjct 71681991 ATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTCA 71682050
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | || || || || || || |||||||| || | || ||| || || |||
Sbjct 71682051 GCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGGA 71682110
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||||||||||||||| ||||| || | || || | ||
Sbjct 71682111 GGGATCCCTTCCTTGTCCTGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGACTCA 71682170
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || |||||||| || || || || || ||||| ||||||||
Sbjct 71682171 ACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71682220
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| |||||||||| ||||| | || || || || || ||||||
Sbjct 71676735 GTCGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTCCAGCTGCTTTCCA 71676794
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || ||||| || |||||||||||||||||
Sbjct 71676795 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTTC 71676854
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||| || || || || ||||| || ||||| || || || ||
Sbjct 71676855 ACATTATCAATTGTGTCGGAAGACTCAACTTCAAGTGTGATGGTCTTTCCCGTCAGAGTC 71676914
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 71676915 TTCACGAAGATTTGCAT 71676931
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| |||||||||| ||||| | || || || || || ||||||
Sbjct 71681568 GTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTCCAGCTGCTTTCCA 71681627
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || |||||||| || ||||||||||||||
Sbjct 71681628 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCTTCTTTGTCTTGAATCTTTGCTTTC 71681687
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || || || || || ||||| || ||||| ||||| || ||
Sbjct 71681688 ACATTATCAATTGTGTCAGAAGACTCAACTTCAAGTGTGATGGTCTTTCCAGTCAGAGTC 71681747
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 71681748 TTCACGAAGATTTGCAT 71681764
Score = 95.1 bits (104), Expect = 3e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| || || | ||| | || || || |||||||| || |||||||
Sbjct 64494123 TTCCACCCCTGAGCCTCAGGACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAG 64494182
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| ||||| || ||||| | ||| || ||||||||||| ||||| || || || || |
Sbjct 64494183 CTAACGTTCTCCCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGGG 64494242
Query 104451 GTATTCCTTCTTTATCCTGA 104470
| || || || || ||||||
Sbjct 64494243 GAATGCCCTCCTTGTCCTGA 64494262
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| ||||||||||| || ||||| | | || | ||||| || || || || |||
Sbjct 71676507 GTAGACTCTTTCTGAATGTTGTAGTCTGCCAAGGTGCGGCCGTCCTCAAGCTGCTTACCA 71676566
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || || || || | || || || || || || ||||| || ||
Sbjct 71676567 GCAAAGATCAGGCGTTGCTGGTCCGGTGCGATGCCCTCCTTGTCTTGGATCTTCGCCTTC 71676626
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | || ||||| | || || ||||| || || || ||
Sbjct 71676627 ACATTGTCAATGGTGTCTGACGACTCCACCTCCAAGGTGATGGTCTTCCCCGTCAGAGTC 71676686
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 71676687 TTCACAAAGATCTGCAT 71676703
>seq6
Length=240577051
Score = 131 bits (144), Expect = 4e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || | || | || || || ||||| || || |||||
Sbjct 194678809 ATGCCTCCCCTGAGCCTGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 194678750
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | || || ||||| || ||||||||||| || |||||||| || || ||
Sbjct 194678749 GCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGG 194678690
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || || || || ||||| || ||||| || ||||| || | |||||| | ||| ||
Sbjct 194678689 GGGATGCCCTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATGGTATC-CGAGGACTC 194678631
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| || || || || || ||||| ||||||||
Sbjct 194678630 AACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 194678580
>seq4
Length=191835039
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || ||||| || || || | || || | || || || || || ||||||
Sbjct 68254201 GTGGACTCCTTTTGAATGTTGTAATCTGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCA 68254142
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || |||||||| |||||||| || ||||| |||||||| ||
Sbjct 68254141 GCAAAGATAAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTG 68254082
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||| || || ||||| || || || ||||| || || |||||
Sbjct 68254081 ACATTGTCAATCGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTC 68254022
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 68254021 TTCACAAAGATCTGCAT 68254005
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||| || |||||||| ||||||||||||| ||||| | || ||
Sbjct 68254444 AGGACAAGATGGAGTGTGGACTCTTTCTGGATATTATAGTCAGCCAGAGTACGCCCATCC 68254385
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || || ||||| || || | ||| || || || || || || || || |||
Sbjct 68254384 TCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 68254325
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| |||||||| || ||||| || | ||| || | || ||||| | || || |||
Sbjct 68254324 TGGATCTTTGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACCTCCAAGGTGATGGTC 68254265
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || || ||||| ||||||||
Sbjct 68254264 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 68254233
Score = 98.7 bits (108), Expect = 2e-15
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| || || || || |||||||||||||| || || |||| | ||| | || || ||
Sbjct 68257616 ACAAGGTGCAAAGTGGATTCTTTCTGAATGTTGTAATCAGCAAAAGTGCAACTATCCTCA 68257557
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| || || || ||||| || || | ||| || | ||| | || ||||| || ||||||
Sbjct 68257556 AGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTTTGGATGAATACCTTCATTGTCCTGA 68257497
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||| |||| || |||| || | || || | || ||| | || || || |||||
Sbjct 68257496 ATC-TTGCCTTGGCATTGTCAATAGTGTCCGATGACTCCACCACGAGGGTGATGGTCTTG 68257438
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||||||
Sbjct 68257437 CCAGTGAGAGTCTTCACAAAGATCTGCAT 68257409
Score = 96.9 bits (106), Expect = 8e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| |||||||| || || || | || || | || || || || || || ||
Sbjct 68254885 GTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTCCGCCCATCCTCCAGCTGCTTGCCG 68254826
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || || || ||||||||||| || ||
Sbjct 68254825 GCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 68254766
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || || || ||||| | || || ||||| || || || ||
Sbjct 68254765 ACATTGTCAATCGTGTCTGAAGACTCCACCTCCAAAGTGATGGTCTTGCCGGTGAGCGTC 68254706
Query 104543 TTTACAAATATCTGCATT 104560
|| ||||| |||||||||
Sbjct 68254705 TTGACAAAAATCTGCATT 68254688
>seq7
Length=154015841
Score = 116 bits (128), Expect = 9e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || | || | || || || ||||| || || |||||
Sbjct 60356853 ATGCCTCCCCTGAGCCTTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCC 60356912
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | || || || || || ||||||||||| || |||||||| || || ||
Sbjct 60356913 GCAAGAGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGG 60356972
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || ||||| || ||||| ||||| ||||| || || || | || || | ||| ||
Sbjct 60356973 GGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTGTCAATTGTGTC-CGAGGACTC 60357031
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| || || || || || || || ||||||||
Sbjct 60357032 AACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 60357082
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || ||||| | || || | ||||| || || || || |||
Sbjct 36806733 GTCGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCA 36806674
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || |||||||||||||| | ||
Sbjct 36806673 GCGAAGATGAGGCACTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGAATCTTAGTCTTG 36806614
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||||| || ||||| || || || ||||| || || || ||
Sbjct 36806613 ACATTGTCGATGGTGTCGCTGCTCTCCACCTCGAGCGTGATCGTCTTCCCCGTCAGGGTC 36806554
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| || || ||||||||||||
Sbjct 36806553 TTCACGAAGATCTGCATTTTG 36806533
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||| | || || | || || || || || || |||
Sbjct 60356202 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 60356261
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || || || ||||||||||| || ||
Sbjct 60356262 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 60356321
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || | || ||||| || ||||| ||||| ||||| || ||
Sbjct 60356322 ACATTGTCAATTGTGTCTGAGGACTCCACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTC 60356381
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 60356382 TTCACAAAAATCTGCAT 60356398
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| | || || | ||||| ||||| || || ||
Sbjct 37434951 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCTAGCTGCTTGCCG 37435010
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || |||||||||||||| | ||
Sbjct 37435011 GCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTATCCTGAATCTTGACCTTG 37435070
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || | | ||| ||||| || ||||| || || || ||||| || || || ||
Sbjct 37435071 ACGTTGTTAATGGTGTCGCTGCTCTCCACCTCGAGCGTGATCGTCTTCCCCGTCAGCGTC 37435130
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 37435131 TTCACAAAGATCTGCAT 37435147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151097615518412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |