Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
>seq2
Length=243061704
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560
||||| ||||| || || || || |||| | | || |||| ||| | | ||||||
Sbjct 23559855 ACGCCGGTGGATCCAAACCCTCCCTCGCCGCGCACGGTGGCGTCGAGGTCCTCAACCTCT 23559914
Query 5561 TCCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620
| || || || ||| |||| |||| |||||| || ||||| || | |||
Sbjct 23559915 GCGACCTCCGGCGTCGCGATAACCTCGATAATCATCTGCGCGATCCGGTCCCCAGGCTTG 23559974
Query 5621 ACCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGT 5678
|| | || || | |||| |||||| || | || |||||| |||||||||||
Sbjct 23559975 ACGGCAAAGTCCACAT--CCGAGTGGTTGAAGAGGATGACACCCACGGGGCCGCGGTAGT 23560032
Query 5679 CGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGA 5733
| ||||| |||||||| ||||| ||||||||| ||||||| | ||| || || ||
Sbjct 23560033 CAGCGTCGATCACGCCAGCGCCAACGTCGATGGAGTGCTTCAGCGCAAGCCCCGA 23560087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429947535378968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |