Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq17829 609 7e-170
seq1 549 6e-152
seq4 545 7e-151
seq6 188 2e-43
seq3 185 3e-42
seq5428 86.0 2e-12
>seq17829
Length=1032
Score = 609 bits (674), Expect = 7e-170
Identities = 732/990 (74%), Gaps = 4/990 (0%)
Strand=Plus/Plus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || || || || ||||| ||||| | || |||||||| || |
Sbjct 25 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 84
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| |||| || || || || ||
Sbjct 85 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 144
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||||||| ||||| || |||||||| ||||| || || || | || |||||||||
Sbjct 145 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAAT 204
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||||||||| || | |||| | || || || || ||||||||||||| ||
Sbjct 205 ATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATTGGTTTGCACTTTTATCCAATA 264
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | | | ||||| ||||||||||| |||||||||||| |||| ||||
Sbjct 265 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGCGGTCCATATGAACTAATTGTT 324
Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649
| ||||||||| | || ||||| ||| ||| | |||||||||| || |
Sbjct 325 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 384
Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709
| || ||| | || ||||| || |||||| |||| || | |||| ||| ||||
Sbjct 385 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 444
Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768
|| ||||| | | |||||| | || ||||| |||||| |||||||||||||| || ||
Sbjct 445 GT-TTTCTTGATCTACCCAATAGGTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAAT 503
Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828
||||||||||| ||||||||| | ||||| || || || || ||||| |||||||| ||
Sbjct 504 TTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCC 563
Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888
|| |||||| | ||||| ||||| |||||||| || || || ||| ||||||||||||
Sbjct 564 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGG 623
Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948
||||| ||||| | |||| |||||| || || ||| ||| || | ||
Sbjct 624 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 683
Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008
|| | ||||| ||||| ||||| || ||||||||||| ||||| || || || |||||
Sbjct 684 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGG 743
Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068
||||||| || |||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct 744 CCGATTGATCTTCCAATATGCGAGTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGC 803
Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128
| ||| || || || || || ||| ||||| | | || ||| ||||||||||||||||
Sbjct 804 TGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAA 863
Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187
| |||||||| || |||||||| || ||||||||| ||||| || |||| |
Sbjct 864 TTTAAATGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAATA 922
Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247
| ||||||||| | | || | |||||||| || | ||||||||||| || || ||||
Sbjct 923 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 982
Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGG 20277
||||||| ||||| || || |||||| |||
Sbjct 983 CTCATAATTTCCCTCTAGACTTAGCTGCGG 1012
>seq1
Length=275477322
Score = 549 bits (608), Expect = 6e-152
Identities = 702/962 (73%), Gaps = 4/962 (0%)
Strand=Plus/Plus
Query 19314 GAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTACTAGCTGCT 19373
|| ||||| ||||| | || ||||| || || | ||||| ||| |||| | | ||
Sbjct 183993044 GAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCA 183993103
Query 19374 ACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGT 19433
||| | ||||| ||||||| ||||| || || || |||||||| ||||| || |||
Sbjct 183993104 ACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 183993163
Query 19434 GAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCA 19493
||||| ||||| || || ||| | || |||||||||||||||||||| || | ||||
Sbjct 183993164 GAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCT 183993223
Query 19494 AGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAG 19553
| || || || ||| |||| ||||| || || |||||||| | || | |||||
Sbjct 183993224 ACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAA 183993283
Query 19554 TGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCA 19613
||||||||||| || ||||| ||| | || |||| | ||||||||| | || |||||
Sbjct 183993284 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 183993343
Query 19614 GCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTC 19673
|| ||| | |||||||||| || | | | || ||| | || |||||
Sbjct 183993344 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 183993403
Query 19674 GTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGG 19732
|| |||||| |||| || | |||| ||| |||||| ||||| | |||| || ||||
Sbjct 183993404 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTATCCTATTGG 183993462
Query 19733 GCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTT 19792
||||| ||||| ||||||||||||| | || || ||||||||||| ||||||||| |
Sbjct 183993463 TCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 183993522
Query 19793 CGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGG 19852
|||||||| ||||||||||| |||||||||||||| || |||||| | ||||| |||||
Sbjct 183993523 TGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGG 183993582
Query 19853 CGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCAT 19912
|||||||| || || || ||| ||||||||| || ||||| || || | ||
Sbjct 183993583 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 183993642
Query 19913 CAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGA 19972
|| |||||| ||||| ||| || || | || || || || || ||||| |||||
Sbjct 183993643 CAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGA 183993702
Query 19973 GACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTC 20032
||| ||||| ||||| ||||| || || || ||||| |||| || || |||||||||
Sbjct 183993703 GACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAG 183993762
Query 20033 TTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATG 20092
|||||| || |||||||||||||| ||||| | ||| ||| || || || || || ||
Sbjct 183993763 TTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTG 183993822
Query 20093 GCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCA 20152
| | || | | || || | |||||||| || ||||| ||||| || || || |||||
Sbjct 183993823 GTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCA 183993882
Query 20153 GTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAG 20211
|| ||||||||| ||||| || | || || ||||||||| | | || | |
Sbjct 183993883 ATCCGTAGTTGATAGTCAA-GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTG 183993941
Query 20212 CTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAG 20271
|||| || || | ||||| |||||||| || ||||||||||||||||| || ||| |||
Sbjct 183993942 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAG 183994001
Query 20272 CT 20273
||
Sbjct 183994002 CT 183994003
Score = 219 bits (242), Expect = 1e-52
Identities = 349/498 (70%), Gaps = 2/498 (0%)
Strand=Plus/Minus
Query 19305 ACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTA 19364
|| || ||||| |||| ||||| | || ||||| || || | | ||| ||| ||||
Sbjct 150871657 ACTAGCACCGAAAACCATCTTTACATCGGGTGGTTCGGTGTTTTGACGATCCCTACCTTA 150871598
Query 19365 CTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGAT 19424
| | || ||| | ||||| || |||| ||||| || || | |||||||| |||
Sbjct 150871597 TTGACCGCAACTTCCGTATTTATTATCACCTTCATCGCTGCTCCTCTAGTAGATATTGAT 150871538
Query 19425 GGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCA 19484
|| || |||||| ||||| || || ||| | || |||||||||||||||| ||| ||
Sbjct 150871537 GGTATTTGTGAGCTTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTTTGGTGCT 150871478
Query 19485 GTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACT 19544
| |||| | || || || ||| |||| ||||| || || |||||||| | ||
Sbjct 150871477 ATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCT 150871418
Query 19545 TTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATA 19604
| ||||| ||||||||||| || ||||| ||| | || |||| ||||||||| |
Sbjct 150871417 ATTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCCACACTTCTTACTT 150871358
Query 19605 GGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCA 19664
|| ||||| || ||| | |||||||||| || | | | || ||| | ||
Sbjct 150871357 GGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCT 150871298
Query 19665 TGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCG-TTTA 19723
||||| || |||||| |||| | | ||| ||| | |||| ||||| | ||||
Sbjct 150871297 TGGATTGCTGTTGCATATTCAGCTGCTGTTGTAGCTGCTACTACTGT-TTTCTTGATTTA 150871239
Query 19724 CCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAA 19783
|| |||| ||||| ||||| | ||||||||||| | || || ||||||||||| ||
Sbjct 150871238 TCCTATTGGTCAAGGAAGTTTCTCTAATGGTATGCCTTTAGGAATATCTGGTACTTTCAA 150871179
Query 19784 CTTTATGTTCGTATTCCA 19801
||||||| | ||||||||
Sbjct 150871178 CTTTATGATTGTATTCCA 150871161
>seq4
Length=191835039
Score = 545 bits (604), Expect = 7e-151
Identities = 702/963 (73%), Gaps = 4/963 (0%)
Strand=Plus/Plus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || ||||| ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 47963838 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCT 47963897
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 47963898 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 47963957
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | || ||||||||||||||||||
Sbjct 47963958 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCT 47964017
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
|| || | |||| | || || || ||| |||| ||||| || || ||||||||
Sbjct 47964018 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 47964077
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| || ||||| ||| | || |||| | ||||||
Sbjct 47964078 GCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 47964137
Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658
||| | || ||||| || ||| | |||||||||| || | | | || |||
Sbjct 47964138 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 47964197
Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718
| || ||||| || |||||| |||| || | |||| ||| |||||| |||||
Sbjct 47964198 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 47964256
Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777
| |||| || |||| ||||| ||||| ||||||||||||| | || || ||||||||
Sbjct 47964257 GATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 47964316
Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837
||| ||||||||| | |||||||| ||||||||||| |||||||||||||| || |||||
Sbjct 47964317 TTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACAT 47964376
Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897
| | ||||| ||||| |||||||| || || || ||| ||||||||| || |||||
Sbjct 47964377 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 47964436
Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957
|| || | |||| |||||| ||||| ||| || || | || || || ||
Sbjct 47964437 AACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATT 47964496
Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017
|| ||||| |||||||| ||||| ||||| ||||| || || || ||||| |||| ||
Sbjct 47964497 TGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAAT 47964556
Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077
|| ||||||||| |||||| || |||||||||||||| ||||| | ||| ||| ||
Sbjct 47964557 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 47964616
Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137
|| || || || ||| | || | | || || | |||||||| || ||||| |||||
Sbjct 47964617 TGTCGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGG 47964676
Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTG 20196
|| || || ||||| || ||||||||| ||||| || | || || |||||||
Sbjct 47964677 ATTCAATTTCAACCAATCCGTAGTTGATAGTCAA-GGTCGCGTTATTAATACTTGGGCTG 47964735
Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256
|| | | || | ||||| || || | ||||| |||||||| || |||||||||||||
Sbjct 47964736 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACT 47964795
Query 20257 TCC 20259
|||
Sbjct 47964796 TCC 47964798
Score = 482 bits (534), Expect = 7e-132
Identities = 690/964 (72%), Gaps = 7/964 (1%)
Strand=Plus/Minus
Query 19313 CGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTACTAGCTGC 19372
||| ||||| ||||| | || ||||| || | ||||| ||| |||| | | ||
Sbjct 76202959 CGAAAACCGTCTTTACATCGGGTGGTTCAATGTTTTGATGATCCCTACCTTATTGACCGC 76202900
Query 19373 TACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACG 19432
||| | ||||| || |||| ||||| || || || |||||||| |||| || ||
Sbjct 76202899 AACTTCCGTATTTATTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCG 76202840
Query 19433 TGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCC 19492
|||||| || | || || ||| | || |||||||||||||||||||| || | ||||
Sbjct 76202839 TGAGCCTGTCT--GGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCC 76202782
Query 19493 AAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGA 19552
| || | ||||| ||| |||| ||||| || || ||||||| | || | |||||
Sbjct 76202781 TACTTCTACGGCAATCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGA 76202722
Query 19553 GTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGC 19612
||||||||||| |||||||| ||||| || |||| | ||||||||| | || | |||
Sbjct 76202721 ATGGTTATACAATGGCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTGCAGC 76202662
Query 19613 AGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATT 19672
|| ||| | |||||||||| || | | | || ||| | || ||||| |
Sbjct 76202661 TTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGT 76202602
Query 19673 CGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTTT-ACCCATTTG 19731
|| |||||| |||| | | ||| ||| |||||| ||||| | || | || |||
Sbjct 76202601 TGTTGCATATTCAGCTCATGTTGCAGTTGCTACTGCTGT-TTTCTTGATTCATCCTATTG 76202543
Query 19732 GGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTT-ATG 19790
| ||||| ||||| ||||||||||| | |||| || ||||||||||| |||||| |||
Sbjct 76202542 GTCAAGGAAGTTTCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTATG 76202483
Query 19791 TTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCT 19850
| ||||| || | ||||||||| |||||||||||||| || |||||| | ||||| |||
Sbjct 76202482 ATTGTATTTCAGGTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCT 76202423
Query 19851 GGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATC 19910
|| |||||||| || || || ||| ||||||||| || ||||| || || |
Sbjct 76202422 GGTGTATTCGGCGGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 76202363
Query 19911 ATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAA 19970
|||| ||||| ||||| ||| || || | || || || || || |||||||||
Sbjct 76202362 ATCAGCGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAA 76202303
Query 19971 GAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCT 20030
||||| ||||| ||||| ||||| || || || ||||| ||| || || |||||||||
Sbjct 76202302 GAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGCT 76202243
Query 20031 TCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATA 20090
|||||| || |||||||||||||| |||| | ||| ||| || || | || ||
Sbjct 76202242 AGTTTCAACAACTCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATC 76202183
Query 20091 TGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAAC 20150
||| | || | | || || | | |||||| |||||||| ||||| || || || |||
Sbjct 76202182 TGGTTCACTGCTTTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAAC 76202123
Query 20151 CAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAG 20209
|| || ||||||||| ||||| || | | || || |||||| || | | || |
Sbjct 76202122 CAATCCGTAGTTGATAGTCAA-GGTCACGTTATTAATACTTGGGCTAATATCATCAACCG 76202064
Query 20210 AGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTT 20269
||||| || || | ||||| |||||||| || |||||||| |||||||| || ||| |
Sbjct 76202063 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 76202004
Query 20270 AGCT 20273
| ||
Sbjct 76202003 AACT 76202000
>seq6
Length=240577051
Score = 188 bits (208), Expect = 2e-43
Identities = 272/384 (71%), Gaps = 0/384 (0%)
Strand=Plus/Plus
Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358
||| | || || || || ||||| ||||| | || ||||| || || | ||||| |||
Sbjct 76928920 TGGATAACTAGCACTGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCT 76928979
Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418
|||| | | || ||| | ||||| ||||||| ||||| || || || ||||||
Sbjct 76928980 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 76929039
Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478
|| ||||| || |||||||| ||||| || || ||| | || ||||||||||||||||||
Sbjct 76929040 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCT 76929099
Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538
|| || | |||| | || || || ||| |||| ||||| || || ||||||||
Sbjct 76929100 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 76929159
Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598
| || | ||||| ||||||||||| || ||||| ||| | || |||| | ||||||
Sbjct 76929160 GCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 76929219
Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658
||| | || ||||| || ||| | |||||||||| || | | | || |||
Sbjct 76929220 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 76929279
Query 19659 AGACCATGGATATTCGTAGCATAT 19682
| || ||||| | || ||||||
Sbjct 76929280 CGCCCTTGGATTGTTGTTGCATAT 76929303
Score = 102 bits (112), Expect = 2e-17
Identities = 120/160 (75%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 20115 ACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGG 20173
|||||||| || ||||| ||||| || || || ||||| || ||||||||| ||||| |
Sbjct 71012677 ACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGT 71012618
Query 20174 AAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTAT 20233
| || | | | ||||||||| | | || | ||||| || || | ||||| ||
Sbjct 71012617 CGCGTTATTAATA-CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAAT 71012559
Query 20234 GCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273
|||||| || ||||||||||||||||| || ||| |||||
Sbjct 71012558 GCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCT 71012519
>seq3
Length=300915289
Score = 185 bits (204), Expect = 3e-42
Identities = 278/392 (71%), Gaps = 5/392 (1%)
Strand=Plus/Minus
Query 19848 GCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCG 19907
||||| |||||||| || || || ||| ||||||||| || ||||| || ||
Sbjct 227134286 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 227134227
Query 19908 ATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGAT 19967
| |||| |||||| ||||| ||| || || | || || || || || |||||
Sbjct 227134226 TTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAA 227134167
Query 19968 GAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATAT 20027
|||||||| ||||| ||||| ||||| || || || ||||| |||| || || ||||||
Sbjct 227134166 GAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATAT 227134107
Query 20028 GCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGC 20087
||| |||||| || |||||||||||||| |||| | ||| ||| || || || ||
Sbjct 227134106 GCTAGTTTCAACAACTCTCGTTCTTTACACTTCT---TGGCTGCTTGGCCTGTCGTAGGG 227134050
Query 20088 ATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTT 20147
|| ||| | || | | || || | ||| |||| |||||||| ||||| || || ||
Sbjct 227134049 ATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTTC 227133990
Query 20148 AACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAA 20206
||||| || ||||||||| ||||| || | | || || ||||||||| | | ||
Sbjct 227133989 AACCAATCCGTAGTTGATAGTCAA-GGTCACGTTATTAATACTTGGGCTGATATCATCAA 227133931
Query 20207 TAGAGCTAACCTCGGATTTGAAGTTATGCACG 20238
| ||||| || || | ||||| || ||||
Sbjct 227133930 CCGTGCTAATCTTGGTATGGAAGTAATACACG 227133899
Score = 185 bits (204), Expect = 3e-42
Identities = 219/294 (74%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 19569 GGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGA 19628
||||| ||| | || |||| | ||||||||| | || ||||| || ||| |
Sbjct 228898023 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGT 228897964
Query 19629 CAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCA 19688
|||||||||| || | | | || ||| | || ||||| || |||||| ||||
Sbjct 228897963 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 228897904
Query 19689 CCACTATCAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAG 19747
|| | |||| || |||||| ||||| | |||| || |||| ||||| |||||
Sbjct 228897903 CCTGTTGCAGCTACTACTGCTGT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTC 228897845
Query 19748 TGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGA 19807
||||||||||||| | || || ||||||||||| ||||||||| | |||||||| |||||
Sbjct 228897844 TGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGA 228897785
Query 19808 ACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGG 19861
|||||| |||||||||||||| || |||||| | ||||| ||||| ||||||||
Sbjct 228897784 ACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 228897731
Score = 176 bits (194), Expect = 1e-39
Identities = 197/262 (75%), Gaps = 1/262 (0%)
Strand=Plus/Plus
Query 19910 CATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGA 19969
||||| |||||| ||||| ||| || || | || || || || || || || ||
Sbjct 48259769 CATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGA 48259828
Query 19970 AGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGC 20029
|||||| ||||||||||| ||||| ||||| || ||||| |||| || || ||||||||
Sbjct 48259829 AGAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGC 48259888
Query 20030 TTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCAT 20089
| |||||| || |||||||||||||| ||||| | ||| ||| || || || || ||
Sbjct 48259889 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGAT 48259948
Query 20090 ATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAA 20149
||| | || | | || || | |||||||| |||||||| |||||||| || || ||
Sbjct 48259949 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAA 48260008
Query 20150 CCAGTCAGTAGTTGAT-GTCAA 20170
||| || ||||||||| |||||
Sbjct 48260009 CCAATCTGTAGTTGATAGTCAA 48260030
>seq5428
Length=272540
Score = 86.0 bits (94), Expect = 2e-12
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 19696 CAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGT 19754
|||| ||| |||||| ||||| | |||| || |||| ||||| ||||| ||||||
Sbjct 118521 CAGCTGCTACTGCTGT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGC 118579
Query 19755 ATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCA 19805
||||| | || || ||||||||||| ||||||||| | |||||||| |||
Sbjct 118580 GTGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCA 118630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144406627890084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |