Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 6e-13
>seq2
Length=243061704
Score = 89.7 bits (98), Expect = 6e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| ||||||||||| |||||||| | || || |||||||| || |||||
Sbjct 119860902 CACGCGAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 119860961
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| || || ||||| || ||||| || |||| ||| || || || ||||||
Sbjct 119860962 CCCGGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAG 119861021
Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33458
|| || || || ||| || || || | |||| |||
Sbjct 119861022 ATGCCCTCGAC-GCAGGCGAACGCGACGAGTCGCTC 119861056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622788434119240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |