Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 3e-14 >seq2 Length=243061704 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || || ||| ||||| || | ||| || || ||| | |||||| | ||| | Sbjct 87114859 ATGAAAGATGACAGCATTGAGGGAATTTATGATACTCTGAAGGAATGTGCTGTCATTAGC 87114800 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || || || ||||||||||| || | |||||| ||||||| || | |||||||| Sbjct 87114799 AAATCAGCTGGAGGAATTGGTGTCTCAGTTCACAATATTCGTGCTACTGGG-AGTTACAT 87114741 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| ||| || ||||| | ||||| ||| | ||||| || || |||| Sbjct 87114740 TCGAGGAACAAATGGAACATCCAATGGAATTGTTCCTATGTTACGTGTATTCAACGATAC 87114681 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| | || || || || ||||| || || | ||||| Sbjct 87114680 TGCTCGTTATGTTGATCAAGGTGGCGGCAAAAGAAAAGG 87114642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303013119644198