Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq20180 136 3e-27 seq12131 131 1e-25 seq10602 131 1e-25 seq5 131 1e-25 seq4 131 1e-25 seq10160 122 6e-23 seq7851 122 6e-23 seq6 118 7e-22 seq7535 105 4e-18 seq2 105 4e-18 seq16803 96.9 2e-15 seq12066 96.9 2e-15 seq7922 96.9 2e-15 seq3 89.7 3e-13 seq20289 86.0 4e-12 >seq20180 Length=3961 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 102 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGT 43 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 42 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8 >seq12131 Length=26016 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 14694 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 14753 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 14754 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 14788 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 16579 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 16638 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 16639 GCCTGTATTTAGCCTT 16654 >seq10602 Length=5927 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 4375 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 4434 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4435 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4469 >seq5 Length=158699395 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1531351 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1531410 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1531411 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1531445 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1609060 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1609119 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1609120 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1609154 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || ||| |||| Sbjct 10472503 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATATCGT 10472444 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| || ||||||||||||||||||||||||| Sbjct 10472443 TAATCCATTTATGCGCGTCACTAATTAGATGACGA 10472409 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 ||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct 10574223 AAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGGGGGAATCTCGT 10574164 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||||| ||||||||||||| || Sbjct 10574163 TAATCCATTCATGCGCGTTACTAATTAGATGATGA 10574129 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||| | Sbjct 16799586 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGATAATGGGAATCTCAT 16799527 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||| |||||||||||||||||| Sbjct 16799526 TAATCCATTCATGCGCATCACTAATTAGATGACGA 16799492 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG-----GGGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| ||| || |||||||| Sbjct 48890830 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGTACAATGGGAATCTCGT 48890771 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||| ||||||| |||||| ||||||| Sbjct 48890770 TAATCCATTCATACGCGTCATTAATTATATGACGA 48890736 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1571197 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1571256 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1571257 GCCTGTATTTAGCCTT 1571272 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1582440 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1582499 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1582500 GCCTGTATTTAGCCTT 1582515 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||| | Sbjct 10478856 CTCTCTCTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTTTCGGTCTCTC 10478797 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 10478796 GCCTGTATTTAGCCTT 10478781 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||| | Sbjct 10548009 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCATGGTACTTGTTCGCTATCGGTCTCTC 10547950 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 10547949 GCGTGTATTTAGCCTT 10547934 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||| || || ||| |||||| ||||| || || |||| Sbjct 71681538 CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCA 71681597 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || ||||| || || || ||||| || || || | ||| Sbjct 71681598 AGAGTCCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 71681657 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| ||| ||| |||||||| | | || || | |||||| Sbjct 71681658 ATGCCTTCTTTGTCTTGAATCTTTGCTTTCACATTATCAATTGTGTCAGAAGACTCAACT 71681717 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| || || || || |||| || |||||||| || |||||| Sbjct 71681718 TCAAGTGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATTTGCATG 71681765 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||| | ||||||||||| | Sbjct 10470556 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTCCACTATCGGTCTCTC 10470497 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 10470496 GCCTGTATTTAGCCTT 10470481 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 || ||| |||||||| ||||||| |||||||| ||||||||||||||||| |||||| | Sbjct 48876278 CTATCTTTTCAAAGTCCTTTTCATCTTTCCCTTGCGGTACTTGTTCGCTATTGGTCTCTC 48876219 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 48876218 GCCTGTATTTAGCCTT 48876203 >seq4 Length=191835039 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 184574562 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 184574503 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 184574502 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 184574468 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 184582458 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 184582399 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 184582398 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 184582364 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 189289293 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTTGATAGTAGACAGGGATAGTGGGAATCTCGT 189289234 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| || |||||||||||||||||||||||||||| Sbjct 189289233 TAACCCATTCATGCGCGTCACTAATTAGATGACGA 189289199 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||||||||||||||| |||||||||| | ||||||||| ||||| | |||||||| Sbjct 190805509 AAGCCCGTTCCCTTGGATGTGGTTTCGTTGGATAGTAGACAGGGGCAGTGGGAATCTCGT 190805568 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 190805569 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 190805603 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| Sbjct 184572575 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTT 184572516 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 184572515 GCCCATATTTAGCCTT 184572500 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 184580588 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 184580529 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 184580528 GCCTGTATTTAGCCTT 184580513 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||||| | Sbjct 190807498 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGATACTTGTTCGCTATCGGTCTCTC 190807557 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 190807558 GCCTGTATTTAGCCTT 190807573 >seq10160 Length=4352 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| |||||||||||||||||||| ||| ||||||||| |||| || |||||||| Sbjct 3980 AAGCACGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGAAAGGGACAGTGGGAATCTCGT 3921 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3920 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3886 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||| | Sbjct 1991 CTCTCTTTTCAAGGTCCTTTTCAACTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1932 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1931 GCCTGTATTTAGCCTT 1916 >seq7851 Length=13649 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||| |||||||||||| ||||||||| |||| || |||||||| Sbjct 4959 AAGCCCGTTCCCTTGCGTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 5018 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5019 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5053 >seq6 Length=240577051 Score = 118 bits (130), Expect = 7e-22 Identities = 80/90 (89%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 || |||||||||||||||||||||| ||||||||| |||| || |||||||||||| Sbjct 103454625 CCTTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAAT 103454566 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACG 25990 || ||||||||||||||||||||||||||| Sbjct 103454565 CCATTCATGCGCGTCACTAATTAGATGACG 103454536 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||| || ||||||| |||||||||||||| | |||||||| Sbjct 134810777 AAGCCCGTTCCCTTGGCTATGATTTCGCTGGATAGTAGATAGGGACAGTTGGAATCTCGT 134810718 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| ||| | |||||||||||||| Sbjct 134810717 TAATCCATTCATGCACGTTAATAATTAGATGACGA 134810683 >seq7535 Length=1467 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1065 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1006 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||||| Sbjct 1005 GCCAATATTTAGCCTT 990 >seq2 Length=243061704 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| || |||||| |||||| || ||||||||||||| Sbjct 233057479 ACCACCACGGAGACGAAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGC 233057420 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || || | || || | || || |||||||| || || || || ||||||| ||| Sbjct 233057419 CAGGGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCGGGGGG 233057360 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||| || |||||| || || ||| ||||| | || || || || ||||| Sbjct 233057359 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCAAC 233057300 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||||||| ||||| || |||||||| Sbjct 233057299 CTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 233057252 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||| || | ||||| || || ||||||||||| ||||| || ||||||| Sbjct 233057250 CCACCCCTCAGGCGGAGCACCAGGTGCAGGGTGCTCTCCTTCTGAATGTTATAATCAGCA 233057191 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || |||| || | || || || || || || || || || || || | |||| Sbjct 233057190 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 233057131 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || || ||||| Sbjct 233057130 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACC 233057071 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || |||||||| |||||||| |||||||| Sbjct 233057070 TCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 233057024 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 226633750 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 226633691 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 226633690 GCCTGTATTTAGCCTT 226633675 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||||||| | ||||| || || ||||||||||| || || |||||||||| Sbjct 233057022 CCACCCCTCAAACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGCG 233056963 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| |||| || | || || || || || || || | || || || | |||| Sbjct 233056962 AGCGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 233056903 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTCAA 38268 | ||| || |||||| || || ||| ||||| | || || || | || || | Sbjct 233056902 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGAC--TCCA 233056845 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | || || || || || || | ||| |||||||| ||||||||| Sbjct 233056844 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATG 233056795 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||| ||||| || || ||||||||||| || || |||||||||| | ||| || Sbjct 229073343 CGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGCAAGGGTACGGCCG 229073284 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || |||||||| || || | || || || | ||||| ||| || ||| Sbjct 229073283 TCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTG 229073224 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 ||| || || ||||| || | || ||| || | || || || | || || Sbjct 229073223 TCCTGGATCTTGGCTTTCACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATG 229073164 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || | ||| ||||| || |||||||| Sbjct 229073163 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 229073129 >seq16803 Length=2522 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 104 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 163 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 164 GTCTGTATTTAGCCTT 179 >seq12066 Length=664773 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 27377 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 27318 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 27317 GCCTGTATTTAGCCTT 27302 >seq7922 Length=136601 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1456 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1397 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1396 GCCTGTATTTAGCCTT 1381 >seq3 Length=300915289 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| |||||||| ||| || || ||||||||||||| ||| ||| |||| || Sbjct 25197861 ACCAAGTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCCAATGTGCGTCCGTCCTCC 25197802 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 || ||||| ||||| || || || || || || | |||| ||| ||||||||| Sbjct 25197801 GGCTGCTTTCCAGCAAAGATGAGTCGCTGCTGGTCTGGCGGGATGCCCTCTTTGTCCTGG 25197742 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||| ||| ||||| | | || || || |||||||| | || ||||| || Sbjct 25197741 ATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCCAGAGTGATAGTCTTC 25197682 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || ||||| || || ||||| Sbjct 25197681 CTAGTAAGTGTCTTCACAAAGATATGCAT 25197653 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||| | Sbjct 69491123 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCACGATACTTGTTCACTATCGGTCTCTC 69491182 Query 20007 GGTAATATTTAGCCTTA 20023 | || ||||||||| Sbjct 69491183 GCCGGTACTTAGCCTTA 69491199 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||| | Sbjct 79042746 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCACGATACTTGTTCACTATCGGTCTCTC 79042805 Query 20007 GGTAATATTTAGCCTTA 20023 | || ||||||||| Sbjct 79042806 GCCGGTACTTAGCCTTA 79042822 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||| ||||| |||||||| |||||| || |||||||| || | || | ||| | Sbjct 25197639 CGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCTGCCAGAGTACGACCA 25197580 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || ||||| ||||| || || | || ||||| | |||| || || || Sbjct 25197579 TCCTCAAGCTGCTTTCCCGCAAAGATGAGCCTCTGCTGATCAGGTGGGATTCCCTCCTTA 25197520 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 ||| ||| || ||| ||||| | | || ||| ||| || || || | || || Sbjct 25197519 TCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCTGAACTCTCCACCTCAAGAGTTATC 25197460 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || | ||| ||||| |||||||||||| Sbjct 25197459 GTCTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 25197424 >seq20289 Length=5422 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| | | | Sbjct 2357 CTCTCTCTTCAAAGTACTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGATATTAC 2416 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||| |||| Sbjct 2417 CATCGTATTTAGTCTTA 2433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334863968656259