Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 3e-11 >seq2 Length=243061704 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCA 63328 ||||| |||| ||| ||||||||||| ||||| || ||| || || || ||| | ||| Sbjct 87114699 AACATAGGAACAATTCCATTGGATGTTCCATTTGTTCCTCGAATGTAACTCCCAGTAGCA 87114758 Query 63329 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63388 |||||||| || ||| | ||| ||||| || || ||| || | || ||| Sbjct 87114759 CGAATATTGTGAACTGAGACACCAATTCCTCCAGCTGATTTGCTAATGACAGCACATTCC 87114818 Query 63389 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447 || | |||||||| || ||||| || || ||||| ||||| | || |||||||| Sbjct 87114819 TTCAGAGTATCATAAATTCCCTCAATGCTGTCATCTTTCATGCAGATGAGGAAACAGCT 87114877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633470510964400