Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 113 4e-20
seq4 109 5e-19
seq3 107 2e-18
seq7 105 6e-18
seq2 93.3 4e-14
>seq5
Length=158699395
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | || |||| || | || | ||||| || ||||| || ||||| |||
Sbjct 74943789 ATACCACCCCTAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCG 74943730
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| || || |||||| ||||||||||||| ||||||||
Sbjct 74943729 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGG 74943670
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | |||||| | ||| |||
Sbjct 74943669 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCG 74943610
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| || || || ||||| ||||||||
Sbjct 74943609 ACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 74943560
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 114180 TGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGT 114239
|||| || || ||||| ||||||||||| || || || || ||| ||||| ||
Sbjct 71677185 TGTAGGGTGGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCAAGCTGC 71677244
Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299
|| ||||| |||| | ||||| ||||||||||| || ||||| ||||| |||||||
Sbjct 71677245 TTCCCAGCAAAGATCAACCGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTT 71677304
Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359
||| | | |||| ||||| | ||| || || || | ||| | || ||||| ||
Sbjct 71677305 GCTTTGACATTGTCAATCGTGTCAGAGGACTCAACTTCAAGGGTGATAGTCTTGCCTGTG 71677364
Query 114360 AGAGTTTTTACAAAAATCTGCATG 114383
|| || || ||||| |||||||||
Sbjct 71677365 AGGGTCTTGACAAAGATCTGCATG 71677388
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GC 114213
||| ||||| || | | ||| | || | ||||| || || ||||||||||| || ||
Sbjct 71681309 ACCACCACGGAGGCGAAGAACAAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAGTCTGC 71681368
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
| | |||||| || ||||| || |||||||| |||| | ||||| |||||||| |
Sbjct 71681369 T-AAGGTACGACCGTCCTCAAGCTGCTTACCAGCAAAGATCAACCGCTGCTGGTCCGGCG 71681427
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
| || ||||| ||||| ||||| || | | |||| |||||| | || ||||
Sbjct 71681428 GGATACCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGACGACTCGA 71681487
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
| |||| ||| | || || || || ||||| || ||||| |||||||||
Sbjct 71681488 CCTCCAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACAAAGATCTGCATG 71681537
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 114180 TGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGT 114239
|||| || || ||||| ||||||||||| || || || || ||| ||||| ||
Sbjct 71682018 TGTAGGGTGGACTCTTTCTGAATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCAAGCTGC 71682077
Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299
|| ||||| |||| | ||||| ||||||||||| || ||||| ||||| |||||||
Sbjct 71682078 TTCCCAGCAAAGATCAACCGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTT 71682137
Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359
||| | | |||| ||||| | ||| || || || | ||| | || ||||| ||
Sbjct 71682138 GCTTTGACATTGTCAATCGTGTCAGAGGACTCAACTTCAAGGGTGATAGTCTTGCCTGTG 71682197
Query 114360 AGAGTTTTTACAAAAATCTGCATG 114383
|| || || ||||| |||||||||
Sbjct 71682198 AGGGTCTTGACAAAGATCTGCATG 71682221
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | || |||| || | || | ||||| || ||||| || ||||| |||
Sbjct 74944017 ATACCACCCCTAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCG 74943958
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| || || |||||| ||||||||||||| ||||||||
Sbjct 74943957 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGG 74943898
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | |||||| | ||| ||
Sbjct 74943897 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCA 74943838
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| || || || ||||| ||||||||
Sbjct 74943837 ACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 74943788
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | ||| | || | |||||| ||||| ||||||||||| || |
Sbjct 71676477 CCACCACGGAGGCGTAGAACAAGGTGGAGCGTAGACTCTTTCTGAATGTTGTAGTCTGCC 71676536
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || || || ||||| || |||||||| |||| || || || |||||||| |
Sbjct 71676537 AAGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAGGCGTTGCTGGTCCGGTGCG 71676596
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
||||| || ||||| ||||| || | | |||| |||||| | || || ||
Sbjct 71676597 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGACGACTCCACC 71676656
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|||| ||| | || || || |||||||| || ||||| |||||||||
Sbjct 71676657 TCCAAGGTGATGGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCATG 71676704
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||||| ||||| |||||||||||||| ||| | || || ||| || || || || ||
Sbjct 71676963 GTAGACTCTTTCTGAATGTTGTAATCAGCT-AAGGTGCGGCCATCCTCGAGCTGCTTTCC 71677021
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| ||||||||||||| || || || |||||||| || ||||| |||||| ||
Sbjct 71677022 AGCAAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGAATCTTCGCCTT 71677081
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | ||||| | || || || |||| || | || || || |||| ||
Sbjct 71677082 CACATTGTCGATTGTGTCTGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTCAAGGT 71677141
Query 114365 TTTTACAAAAATCTGCATGGCT 114386
|| ||||| ||||||||| ||
Sbjct 71677142 CTTCACAAAGATCTGCATGCCT 71677163
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || |||||||| || || | ||| || ||| || || || || |||
Sbjct 71681568 GTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTCCAGCTGCTTTCCA 71681627
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||| ||||| ||||| || || |||||||||||||| ||||||| |||
Sbjct 71681628 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCTTCTTTGTCTTGAATCTTTGCTTTC 71681687
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||| | || || || || | || | || || || ||||||||
Sbjct 71681688 ACATTATCAATTGTGTCAGAAGACTCAACTTCAAGTGTGATGGTCTTTCCAGTCAGAGTC 71681747
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || || ||||||
Sbjct 71681748 TTCACGAAGATTTGCATG 71681765
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||||| ||||| ||||||||||| || ||| | || || ||| || || || || ||
Sbjct 71681796 GTAGACTCTTTCTGAATGTTGTAGTCAGCT-AAGGTGCGGCCATCCTCGAGCTGCTTTCC 71681854
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| ||||||||||||| || || || |||||||| || ||||| |||||| ||
Sbjct 71681855 AGCAAAGATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGAATCTTCGCCTT 71681914
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | ||||| | || || || |||| || | || || || |||| ||
Sbjct 71681915 CACATTGTCGATTGTGTCTGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTCAAGGT 71681974
Query 114365 TTTTACAAAAATCTGCATGGCT 114386
|| ||||||||||||||| ||
Sbjct 71681975 CTTCACAAAAATCTGCATGCCT 71681996
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || || |||||||| ||
Sbjct 74944245 ATACCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCA 74944186
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||| ||||| || || |||||| ||||||||||||| ||||| ||
Sbjct 74944185 GCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGG 74944126
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | ||||| | ||| |||
Sbjct 74944125 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCAGAGGACTCG 74944066
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| || || || ||||| ||||||||
Sbjct 74944065 ACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 74944016
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| || ||||||||||| || || || || ||| || || || || ||
Sbjct 74944440 GTGGATTCCTTCTGAATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 74944381
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 74944380 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 74944321
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | || || || |||| || | || ||||| || || ||
Sbjct 74944320 ACGTTATCGATGGTGTCAGACGACTCCACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTC 74944261
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 74944260 TTGACAAAGATCTGCAT 74944244
>seq4
Length=191835039
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || ||| | || | || ||||| || ||||||||||||||
Sbjct 68254916 ACCACCACGGAGGCGCAGAACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 68254857
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || || ||| || || || || || || ||||||| ||||| |||||||| ||
Sbjct 68254856 CAGGGTCCGCCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGG 68254797
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||||| || ||||| |||||| || | | |||| ||||| | || || ||
Sbjct 68254796 GATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCTGAAGACTCCAC 68254737
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || |||||||| || || || ||||||||||||||
Sbjct 68254736 CTCCAAAGTGATGGTCTTGCCGGTGAGCGTCTTGACAAAAATCTGCAT 68254689
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || ||||||||||||||||| | ||||| ||| ||||| || || |||
Sbjct 68254201 GTGGACTCCTTTTGAATGTTGTAATCTGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCA 68254142
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || ||||| ||||| |||||||| ||||| ||||| |||||| ||
Sbjct 68254141 GCAAAGATAAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTG 68254082
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| || || | || || || || | ||| | || |||||||| || ||
Sbjct 68254081 ACATTGTCAATCGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTC 68254022
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 68254021 TTCACAAAGATCTGCAT 68254005
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || |||||||| ||| || | || | || |||||||| ||||||||||||||
Sbjct 68257637 ATGCCACCACGTAGGTGCAAGACAAGGTGCAAAGTGGATTCTTTCTGAATGTTGTAATCA 68257578
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | | ||| ||||| || || || || |||| || ||||| |||| |||
Sbjct 68257577 GCAAAAGTGCAACTATCCTCAAGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTTTGGA 68257518
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|||| ||||| ||||| |||| ||| || || | |||| ||||| | || ||
Sbjct 68257517 TGAATACCTTCATTGTCCTGAATC--TTGCCTTGGCATTGTCAATAGTGTCCGATGACTC 68257460
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | | ||| | || ||||| || ||||| || ||||| ||||||||
Sbjct 68257459 CACCACGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 68257409
>seq3
Length=300915289
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| || || || | |||||| | ||| | || ||||| || || ||||||||||| |
Sbjct 25198335 CCACCGCGGAGGCGCAAAACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAATCTGCC 25198276
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| |||||| || || || || || ||||| ||||||| | |||||| || ||||||
Sbjct 25198275 AATGTACGACCGTCCTCCAGCTGCTTCCCAGCAAAGATGAGCCTCTGTTGATCTGGAGGA 25198216
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || ||||| ||||| ||||| | |||| |||||| | | | ||
Sbjct 25198215 ATCCCCTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCAGAGCTCTTCACC 25198156
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| ||| | || ||||| |||| || || ||||| ||||||||
Sbjct 25198155 TCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 25198109
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || ||||||||||| || | || || ||| || || || || |||
Sbjct 25197165 GTAGACTCCTTCTGAATGTTGTAGTCAACGAGGGTGCGTCTATCCTCTAGCTGCTTGCCA 25197106
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | |||||||||||||| ||||| || ||||| ||||| |||
Sbjct 25197105 GCAAAGATGAGCCTTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 25197046
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | ||||| || | || | || ||||| ||||| ||
Sbjct 25197045 ACATTGTCAATGGTGTCTGAACTCTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTC 25196986
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 25196985 TTCACAAAGATCTGCAT 25196969
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | | ||| | || | ||||| || || ||||||||||| ||
Sbjct 296745474 ACCACCACGCAGGCGGAGAACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAGTCCGC 296745415
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || ||||| || || || || ||||||| ||||| |||||||||||
Sbjct 296745414 GAGGGTGCGGCCCTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGG 296745355
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||||| || || || || || || | | || | |||||| | || || ||
Sbjct 296745354 GATGCCCTCCTTATCCTGGATTTTGGCCTTCACGTTGTCGATGGTGTCAGACGACTCAAC 296745295
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|||| ||| | || |||||||| || || || ||||| |||||||||
Sbjct 296745294 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 296745246
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
|| ||||| || || || ||| ||||||| ||||| ||||||||||| ||||| || |||
Sbjct 296745173 TCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG 296745114
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| ||||| || | | || | ||||| | || ||||| |||| ||| |
Sbjct 296745113 TCTTGGATCTTAGCCTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATG 296745054
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||||||||| || || ||||| || |||||
Sbjct 296745053 GTCTTGCCGGTCAAGGTCTTCACAAAGATTTGCAT 296745019
>seq7
Length=154015841
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| || || || || ||| || || || || |||
Sbjct 60356202 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 60356261
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||||||| |||||||| || ||||| || ||||| |||||| ||
Sbjct 60356262 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 60356321
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||| | ||| || || || | ||| | || ||||| || || ||
Sbjct 60356322 ACATTGTCAATTGTGTCTGAGGACTCCACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTC 60356381
Query 114366 TTTACAAAAATCTGCATG 114383
|| |||||||||||||||
Sbjct 60356382 TTCACAAAAATCTGCATG 60356399
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || ||||| ||||||||||| | || || ||| || | || || |||
Sbjct 60356430 GTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGGCCATCCTCCAACTGCTTGCCA 60356489
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||||||| ||||| ||||||||||| || ||||| ||||| ||
Sbjct 60356490 GCAAAGATGAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTC 60356549
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||| | ||| || || |||| || | || |||||||| || ||
Sbjct 60356550 ACATTGTCAATTGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTGCCGGTGAGGGTC 60356609
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 60356610 TTGACAAAGATCTGCAT 60356626
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||| ||||| || || ||||| ||||||||||||| |||||||| |||||||| || ||
Sbjct 60356699 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGCGGAATGCCCTCCTT 60356758
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||||| || | | |||| |||||| | ||| ||||| || | || |
Sbjct 60356759 GTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCCGAGGACTCGACCTCAAGCGTGAT 60356818
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| ||||| || || || || || || ||||||||| ||
Sbjct 60356819 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 60356858
>seq2
Length=243061704
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || ||||||||||| | ||||| || || || || || |||||| ||
Sbjct 233056758 TCCTTCTGGATGTTGTAATCAGCGAGCGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAG 233056699
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
||||| | ||| |||||||| || ||||| || ||||| ||||| || | |
Sbjct 233056698 ATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 233056639
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | |||||| | ||| || || || | ||| | || |||||||| || || || |||
Sbjct 233056638 TCGATGGTGTCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACA 233056579
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 233056578 AAAATCTGCAT 233056568
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || ||||||||||| | ||||| || || || || || |||||| ||
Sbjct 233056986 TCCTTCTGGATGTTGTAATCAGCGAGCGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAG 233056927
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
||||| | ||| |||||||| || ||||| || ||||| ||||| || | |
Sbjct 233056926 ATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 233056867
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | |||||| | || || || || | ||| | || |||||||| || || || ||
Sbjct 233056866 TCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACG 233056807
Query 114372 AAAATCTGCATGGCT 114386
|| ||||||||| ||
Sbjct 233056806 AAGATCTGCATGCCT 233056792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420030000409068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |