Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 1e-12
>seq2
Length=243061704
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| || |||| || | |||| || || || ||||| ||||| |||
Sbjct 233057478 CCACCACGGAGACGAAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGCC 233057419
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||| || || ||| |||| || | |||||||||||| | |||
Sbjct 233057418 AGGGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCGGGGGGA 233057359
Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||| || ||||| | || || | || |||| | |||||| | ||| || |
Sbjct 233057358 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATTGTGTCAGAGCTCTCAA 233057301
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||| ||| || || || || || || || || || |||||||||||
Sbjct 233057300 CCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 233057252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347283281802437
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |