Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq1 517 2e-141
seq4 506 3e-138
seq17829 488 8e-133
seq6 176 7e-39
seq3 176 7e-39
>seq1
Length=275477322
Score = 517 bits (572), Expect = 2e-141
Identities = 699/973 (72%), Gaps = 6/973 (1%)
Strand=Plus/Plus
Query 215317 TGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---CGC 215373
||| || ||| | ||| | || ||||| ||||| | ||||| ||| | | | |||
Sbjct 183993043 TGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 183993102
Query 215374 AGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAAT 215433
| || || | | | |||| | ||||||||||| ||||| || ||||| || || ||
Sbjct 183993103 AACTTCCGTATTTATTATCG---CCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTAT 183993159
Query 215434 CAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 215493
| ||||| ||| ||||||||||| | ||||| ||||| || || ||||||||| || |
Sbjct 183993160 TCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTAT 183993219
Query 215494 ACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGA 215553
|||| ||| || |||||||| || || ||||| || |||||||| ||| | |||||
Sbjct 183993220 TCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 183993279
Query 215554 CGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTAT 215613
|||||| | ||||||||||| |||| | || || | | |||||| | ||||| |
Sbjct 183993280 TGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 183993339
Query 215614 TTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGAT 215673
|| || || | ||||||||||| || | | | |||||| | ||||||||
Sbjct 183993340 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT 183993399
Query 215674 CTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATT 215733
|||||| || || || ||||| | ||||| ||| || ||| | | ||||| |
Sbjct 183993400 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTAT 183993459
Query 215734 CGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACAT 215793
||||| || ||||||||||| |||||| | ||||| ||||| || ||||||| ||
Sbjct 183993460 TGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 183993519
Query 215794 GTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGC 215853
| |||| |||||||| || |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct 183993520 GATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 183993579
Query 215854 TGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCT 215913
|||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| | |
Sbjct 183993580 TGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 183993639
Query 215914 AATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGA 215973
||||| || || ||||| | || ||| || | |||||||| || || ||||| ||
Sbjct 183993640 GATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGA 183993699
Query 215974 GGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGC 216033
|| || || ||||| || ||||| || ||||| |||||||| | ||||||||||| ||
Sbjct 183993700 AGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGC 183993759
Query 216034 ATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTAT 216093
|||||||||||| | | | ||||||||| | || || | ||||| | | ||
Sbjct 183993760 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGAT 183993819
Query 216094 CTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAA 216153
|||| ||||| | ||| | |||||||| || ||||| || || ||||| |||||
Sbjct 183993820 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAA 183993879
Query 216154 CCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAG 216213
||| || || || || ||| |||||| ||||||||| || | | ||| |
Sbjct 183993880 CCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 183993939
Query 216214 AGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTT 216273
|| ||||||||||||||||||||||| ||||| ||||| |||||||| |||| |
Sbjct 183993940 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCT 183993999
Query 216274 GGCTGCTGCTGAA 216286
|||||| ||||
Sbjct 183994000 AGCTGCTCTTGAA 183994012
Score = 194 bits (214), Expect = 3e-44
Identities = 287/407 (71%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 215399 TTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTA 215458
||||||||||| |||| || ||||| || || || | |||| ||| |||||||||||
Sbjct 150871567 TTCATCGCTGCTCCTCTAGTAGATATTGATGGTATTTGTGAGCTTGTTTCTGGTTCTTTA 150871508
Query 215459 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTA 215518
| ||||| ||||| || || | ||||||| || | |||| ||| || ||||||||
Sbjct 150871507 CTTTATGGAAACAATATTATTTTTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTG 150871448
Query 215519 CACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCT 215578
|| || ||||| || |||||||| ||| | |||| |||||| | ||||||||||| |||
Sbjct 150871447 CATTTTTACCCAATTTGGGAAGCTGCATCTATTGATGAATGGTTATACAATGGTGGTCCT 150871388
Query 215579 TTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGG 215638
| | || || | |||||| | ||||| | || || || | |||||
Sbjct 150871387 TATGAGCTAATTGTTCCACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGG 150871328
Query 215639 GAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTA 215698
|||||| || | | | |||||| | |||||||| |||||| || || || ||||
Sbjct 150871327 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTGCTGTT 150871268
Query 215699 TCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCT 215758
||||| | | || ||| | | ||||| | ||||| || ||||||| ||| |
Sbjct 150871267 GTAGCTGCTACTACTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTAATGGT 150871208
Query 215759 ATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCA 215805
||||| | ||||| ||||| || ||||||| ||| |||| |||||
Sbjct 150871207 ATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCA 150871161
>seq4
Length=191835039
Score = 506 bits (560), Expect = 3e-138
Identities = 689/960 (72%), Gaps = 6/960 (1%)
Strand=Plus/Plus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---C 215371
|| || || ||| | ||| | || ||||| ||||| | ||||| ||| | | | |
Sbjct 47963850 ACCGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 47963909
Query 215372 GCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGA 215431
||| || || | | | |||| | ||||||||||| ||||| || ||||| || ||
Sbjct 47963910 GCAACTTCCGTATTTATTATCG---CCTTCATCGCTGCTCCTCCAGTAGATATTGATGGT 47963966
Query 215432 ATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTT 215491
|| | ||||| ||| ||||||||||| | ||||| ||||| || || ||||||||| ||
Sbjct 47963967 ATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATT 47964026
Query 215492 GTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTT 215551
| |||| ||| || |||||||| || || ||||| || |||||||| ||| | |||
Sbjct 47964027 ATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTT 47964086
Query 215552 GACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGT 215611
|| |||||| | ||||||||||| |||| | || || | | |||||| | |||||
Sbjct 47964087 GATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGT 47964146
Query 215612 ATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGG 215671
| || || || | ||||||||||| || | | | |||||| | ||||||
Sbjct 47964147 GTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGG 47964206
Query 215672 ATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCA 215731
|| |||||| || || || ||||| | ||||| ||| || ||| | | |||||
Sbjct 47964207 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCT 47964266
Query 215732 TTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTAC 215791
| ||||| || ||||||||||| |||||| | ||||| ||||| || |||||||
Sbjct 47964267 ATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTT 47964326
Query 215792 ATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTG 215851
||| |||| |||||||| || |||||||| || ||||| ||||| ||||||||||||||
Sbjct 47964327 ATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTA 47964386
Query 215852 GCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCT 215911
|||||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| |
Sbjct 47964387 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 47964446
Query 215912 CTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAG 215971
| ||||| || || ||||| | || ||| || | |||||||| || || |||||
Sbjct 47964447 TTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAA 47964506
Query 215972 GAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC 216031
|| || || || ||||| || ||||| || ||||| |||||||| | |||||||||||
Sbjct 47964507 GAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATAT 47964566
Query 216032 GCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGT 216091
|| |||||||||||| | | | ||||||||| | || || | ||||| | |
Sbjct 47964567 GCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGG 47964626
Query 216092 ATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTC 216151
|||||| ||||| | ||| | |||||||| || ||||| || || ||||| |||
Sbjct 47964627 ATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTC 47964686
Query 216152 AACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAAC 216211
||||| || || || || ||| |||||| ||||||||| || | | |||
Sbjct 47964687 AACCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAAC 47964746
Query 216212 AGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGAC 216271
| || ||||||||||||||||||||||| ||||| ||||| ||||||| |||||
Sbjct 47964747 CGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCTTCTAGAC 47964806
Score = 466 bits (516), Expect = 3e-126
Identities = 638/889 (72%), Gaps = 3/889 (0%)
Strand=Plus/Minus
Query 215399 TTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTA 215458
||||||||||| ||||| || ||||| | || || | ||||| || |||||||||||
Sbjct 76202877 TTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGTGAGCCTGT--CTGGTTCTTTA 76202820
Query 215459 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTA 215518
| ||||| ||||| || || ||||||||| || | |||| ||| | |||||||||||
Sbjct 76202819 CTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTACGGCAATCGGATTG 76202760
Query 215519 CACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCT 215578
|| || ||||| || ||||||| ||| | ||||| |||||| | |||||||| || |||
Sbjct 76202759 CATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCT 76202700
Query 215579 TTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGG 215638
| || || || | | |||||| | ||||| || || || | |||||
Sbjct 76202699 TATCAGCTAATTGTTCTACACTTCTTACTTGGTGCAGCTTGTTATATGGGTCGTGAGTGG 76202640
Query 215639 GAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTA 215698
|||||| || | | | |||||| | |||||||| |||||| || || || | |||
Sbjct 76202639 GAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTCATGTT 76202580
Query 215699 TCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCT 215758
| | ||| ||| || ||| | | |||| | ||||| || ||||||||||| |
Sbjct 76202579 GCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATTGGTCAAGGAAGTTTCTCTGATGGT 76202520
Query 215759 ATGCCACTTGGAATCTCTGGAACATTCAACTAC-ATGTTTGTTTTCCAGGCTGAGCACAA 215817
|||| ||||||| ||||| || ||||||| ||| |||| || |||| || |||||
Sbjct 76202519 ATGCATTTTGGAATATCTGGTACTTTCAACTTTTATGATTGTATTTCAGGTAGAACACAA 76202460
Query 215818 CATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTT 215877
||| || ||||| ||||| |||||||||||||| |||||||| ||||| ||||| | ||
Sbjct 76202459 CATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATT 76202400
Query 215878 CTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGA 215937
| ||| ||||| ||||| | || || ||| | | ||||| || || ||||| | ||
Sbjct 76202399 CAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGCGAAACCACTGAAAATGA 76202340
Query 215938 ATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGC 215997
||| || | |||||||| || || ||||| || || || || ||||| || |||||
Sbjct 76202339 GTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAAGAGACTTATAACATTGTGGCTGC 76202280
Query 215998 ACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCT 216057
|| ||||| ||||||| | ||||||||||| || |||||||||||| | | |
Sbjct 76202279 TCATGGTTATTTTGGTCAATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTT 76202220
Query 216058 TCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTC 216117
||| ||||| | || || | ||||| || | |||||| ||||| | ||| |
Sbjct 76202219 ACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATCTGGTTCACTGCTTTAGGTATTAG 76202160
Query 216118 AACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGG 216177
| |||||| |||||||| || || ||||| |||||||| || || || || ||
Sbjct 76202159 TAATATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGG 76202100
Query 216178 TAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAAT 216237
| | |||||| ||||||||| | | | ||| | || |||||||||||||||||
Sbjct 76202099 TCACGTTATTAATACTTGGGCTAATATCATCAACCGTGCTAATCTTGGTATGGAAGTAAT 76202040
Query 216238 GCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286
|||||| ||||| |||||||||||||| |||| | ||||| ||||
Sbjct 76202039 GCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAACTGCTCTTGAA 76201991
>seq17829
Length=1032
Score = 488 bits (540), Expect = 8e-133
Identities = 687/965 (71%), Gaps = 0/965 (0%)
Strand=Plus/Plus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 46 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 105
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
|| || || || || | || ||||| ||||| ||||| || ||||| || || ||
Sbjct 106 GCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATT 165
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| ||||| ||| |||| ||| || | ||||| ||||| || || |||||||| || |
Sbjct 166 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 225
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|||| ||| || || || || ||||| || || || |||||||| ||| | |||||
Sbjct 226 CCTACTTCTGCGGCTATTGGTTTGCACTTTTATCCAATATGGGAAGCTGCATCCGTTGAT 285
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||| | |||||||| || || | |||| || | | |||||| | ||||| |
Sbjct 286 GAATGGTTATACAATGGCGGTCCATATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 345
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| ||| || | ||||||||||| || | | |||||| | ||||||||
Sbjct 346 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 405
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
|||||| || || || ||||| | ||||| ||| || ||| | | || ||| |
Sbjct 406 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATA 465
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
||||| || ||| || |||| |||||| || ||||| ||||| || ||||||| |||
Sbjct 466 GGTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATG 525
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|||| || ||||||||||| || ||||| ||||||||||| |||||||||||||| |||
Sbjct 526 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCT 585
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| ||||| || || | ||| ||| ||||||||||| | || || ||| | |
Sbjct 586 GGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 645
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || || || | |||||| || | ||||||| ||||| ||||||||
Sbjct 646 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 705
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
||||| || || || |||||||| || ||||| ||||| || | ||||||||||| ||
Sbjct 706 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCG 765
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
||||||||| || | | | || ||||| || || || | ||||| | |||||
Sbjct 766 AGTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATC 825
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| || || | ||| || |||||||| ||||| | || |||||||| || |||
Sbjct 826 TGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAAC 885
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214
|| || || || || ||| || ||| ||| ||||| || || ||||| |
Sbjct 886 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGT 945
Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274
|| |||||||||||||| ||||| || ||||| ||||| || ||||| |||||||
Sbjct 946 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACTTA 1005
Query 216275 GCTGC 216279
|||||
Sbjct 1006 GCTGC 1010
>seq6
Length=240577051
Score = 176 bits (194), Expect = 7e-39
Identities = 264/374 (71%), Gaps = 6/374 (2%)
Strand=Plus/Plus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---C 215371
||||| || ||| | ||| | || ||||| ||||| | ||||| ||| | | | |
Sbjct 76928932 ACTGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 76928991
Query 215372 GCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGA 215431
||| || || | | | |||| | ||||||||||| ||||| || ||||| || ||
Sbjct 76928992 GCAACTTCCGTATTTATTATCG---CCTTCATCGCTGCTCCTCCAGTAGATATTGATGGT 76929048
Query 215432 ATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTT 215491
|| | ||||| ||| ||||||||||| | ||||| ||||| || || ||||||||| ||
Sbjct 76929049 ATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATT 76929108
Query 215492 GTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTT 215551
| |||| ||| || |||||||| || || ||||| || |||||||| ||| | |||
Sbjct 76929109 ATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTT 76929168
Query 215552 GACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGT 215611
|| |||||| | ||||||||||| |||| | || || | | |||||| | |||||
Sbjct 76929169 GATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGT 76929228
Query 215612 ATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGG 215671
| || || || | ||||||||||| || | | | |||||| | ||||||
Sbjct 76929229 GTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGG 76929288
Query 215672 ATCTGTGTTGCTTA 215685
|| |||||| ||
Sbjct 76929289 ATTGTTGTTGCATA 76929302
Score = 105 bits (116), Expect = 1e-17
Identities = 124/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 216119 ACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGT 216178
|||||||| || ||||| || || ||||| |||||||| || || || || |||
Sbjct 71012677 ACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGT 71012618
Query 216179 AAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATG 216238
|||||| ||||||||| || | | ||| | || ||||||||||||||||||
Sbjct 71012617 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATG 71012558
Query 216239 CACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286
||||| ||||| ||||| |||||||| |||| | |||||| ||||
Sbjct 71012557 CACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCTCTTGAA 71012510
>seq3
Length=300915289
Score = 176 bits (194), Expect = 7e-39
Identities = 279/398 (70%), Gaps = 3/398 (1%)
Strand=Plus/Minus
Query 215852 GCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCT 215911
|||||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| |
Sbjct 227134286 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 227134227
Query 215912 CTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAG 215971
| ||||| || || ||||| | || ||| || | |||||||| || || |||||
Sbjct 227134226 TTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAA 227134167
Query 215972 GAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC 216031
|| || || || ||||| || ||||| || ||||| |||||| | | |||||||||||
Sbjct 227134166 GAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATAT 227134107
Query 216032 GCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGT 216091
|| |||||||||||| | |||| || |||| | || || | ||||| | |
Sbjct 227134106 GCTAGTTTCAACAACTCTCG--TTCTTTAC-ACTTCTTGGCTGCTTGGCCTGTCGTAGGG 227134050
Query 216092 ATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTC 216151
|||||| ||| | | ||| | ||| |||| |||||||| || || ||||| |||
Sbjct 227134049 ATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTTC 227133990
Query 216152 AACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAAC 216211
||||| || || || || ||| | |||||| ||||||||| || | | |||
Sbjct 227133989 AACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATCAAC 227133930
Query 216212 AGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAA 216249
| || ||||||||||||||||| |||| |||||
Sbjct 227133929 CGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892
Score = 170 bits (188), Expect = 3e-37
Identities = 177/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 215634 AGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCAC 215693
||||||||||| || | | | |||||| | |||||||| |||||| || || || |
Sbjct 228897962 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 228897903
Query 215694 CTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTG 215753
|||| | ||| | ||| || ||| | | ||||| | ||||| || ||||||||
Sbjct 228897902 CTGTTGCAGCTACTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTG 228897843
Query 215754 ATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGC 215813
||| |||||| | ||||| ||||| || ||||||| ||| |||| |||||||| || |
Sbjct 228897842 ATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAAC 228897783
Query 215814 ACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGG 215865
||||||| || ||||| ||||| |||||||||||||| |||||||| |||||
Sbjct 228897782 ACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 228897731
Score = 143 bits (158), Expect = 4e-29
Identities = 204/287 (71%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || ||||| | || ||| || | |||||||| || || || || ||
Sbjct 48259770 ATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAA 48259829
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
|| || || || || || ||||| |||||||| |||||||| | ||||||||||| ||
Sbjct 48259830 GAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCT 48259889
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
|||||||||||| | | | ||||||||| | || || | ||||| | | |||
Sbjct 48259890 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATC 48259949
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| ||||| | ||| | |||||||| |||||||| || |||||||| ||||||
Sbjct 48259950 TGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAAC 48260009
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGA 216201
|| ||||| || || ||| |||||| ||||||||| ||
Sbjct 48260010 CAATCTGTAGTTGATAGTCAAGGTTGCGTTATTAATACTTGGGCTGA 48260056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 744891706640720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |