Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq1 641 4e-179 seq4 637 5e-178 seq17829 612 2e-170 seq3 248 1e-60 seq6 199 5e-46 seq10791 86.0 7e-12 seq5428 82.4 9e-11 >seq1 Length=275477322 Score = 641 bits (710), Expect = 4e-179 Identities = 718/957 (75%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||||||||| || |||||||||||||| |||||||||||||| Sbjct 183994002 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 183993943 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| || ||| ||||| || | Sbjct 183993942 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 183993883 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || |||||||| || ||||||||||| || |||| ||| | ||||| ||| Sbjct 183993882 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAAC 183993823 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||||||||| ||||| | ||||||| |||||||| Sbjct 183993822 CAGATCCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 183993763 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | ||||| || || || |||||||| ||||| |||||||| Sbjct 183993762 CTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTC 183993703 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || ||||||||||| || |||||||| | || || ||||||| || ||||| | | Sbjct 183993702 TCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 183993643 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | ||||||||||| ||| |||||| | || ||||||||| Sbjct 183993642 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 183993583 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct 183993582 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACA 183993523 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | ||| ||||||| || || || || || | ||||| |||||||||||| ||||| Sbjct 183993522 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 183993463 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | |||||| | | ||| ||||||| || |||||||| ||||| || || |||||| Sbjct 183993462 CCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 183993403 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| || |||||||| ||||| | ||||||||| ||||||||||| ||| | Sbjct 183993402 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 183993343 Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692 | |||||| | |||||| | |||| || | |||||| |||||||| |||| |||| Sbjct 183993342 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 183993283 Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752 || || | | ||| ||||||||||| || || ||||| | || || || ||| | Sbjct 183993282 TCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTA 183993223 Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812 |||| | ||||||||||| || |||||||| || | | |||||||| || |||||| Sbjct 183993222 GGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCA 183993163 Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871 || ||||| |||||||| ||||| || ||| | | ||| || || || || || || ||| Sbjct 183993162 CGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA-AGT 183993104 Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTT 84928 || | | || || || ||||| | | || ||||| || | || | |||||| Sbjct 183993103 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTT 183993047 Score = 230 bits (254), Expect = 3e-55 Identities = 295/407 (72%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 84444 TGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAA 84503 ||||| |||| ||| ||||||| || || || || || | ||||| |||| ||||||| Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220 Query 84504 GAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAG 84563 ||||| || | |||||| | | ||| |||| || || ||| |||| | ||| || Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGTAGTAGCAGCTACAACAGCAGCTGAA 150871280 Query 84564 TAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCC 84623 || |||||| ||||| || |||||||| ||||| | ||||||||| ||||||||| Sbjct 150871281 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 150871340 Query 84624 ATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTA 84683 || ||| | | |||||| | |||||| |||| || | |||||| |||||||| Sbjct 150871341 ATATAACAAGCTACACCAAGTAAGAAGTGTGGAACAATTAGCTCATAAGGACCACCATTG 150871400 Query 84684 TATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCA 84743 |||| |||||| || ||| ||| ||||||||||| || || ||||| | || || || Sbjct 150871401 TATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCC 150871460 Query 84744 TTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCG 84803 ||| | |||| | |||||| |||| || |||||||| || | | |||||||| Sbjct 150871461 GCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACCAGAA 150871520 Query 84804 ACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAA 84850 || |||||| ||||| |||||||| ||| | || ||| | | ||| Sbjct 150871521 ACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAA 150871567 >seq4 Length=191835039 Score = 637 bits (706), Expect = 5e-178 Identities = 726/972 (75%), Gaps = 2/972 (0%) Strand=Plus/Minus Query 83986 GGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGTA 84045 |||||||||| || |||||||||||||| |||||||||||||| ||||| || | | Sbjct 47964798 GGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGGTTGATGA 47964739 Query 84046 CATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTAA 84105 ||| ||||| ||||| | ||| || ||| ||||| || | || ||||| || | Sbjct 47964738 TATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTTGAAATTGA 47964679 Query 84106 ATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCA 84165 ||||||| || ||||||||||| || |||| ||| | ||||| ||||| || || || | Sbjct 47964678 ATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGATCCCTACGA 47964619 Query 84166 CTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGA 84225 | ||||||||||||||||| ||||| | ||||||| |||||||| |||||| |||| Sbjct 47964618 CAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGA 47964559 Query 84226 AGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGAC 84285 |||| | ||||| || || || |||||||| ||||| |||||||| || |||||||||| Sbjct 47964558 AGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGAC 47964499 Query 84286 CGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAG 84345 | || |||||||| | || || ||||||| || ||||| | ||| | | ||| | Sbjct 47964498 CAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGG 47964439 Query 84346 TGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCA 84405 | || | ||||||||||| ||| |||||| | || |||||||||||||| || || | Sbjct 47964438 TTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCTA 47964379 Query 84406 ACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGA 84465 |||||||||| ||||||||||||||||| ||||| |||||||| |||| ||| |||||| Sbjct 47964378 ACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAATCATAAAGTTGA 47964319 Query 84466 ACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACA 84525 | || || || || || | ||||| |||||||||||| ||||| || | |||||| | Sbjct 47964318 AAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGATAAA 47964259 Query 84526 CAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGAC 84585 | ||| ||||||| || |||||||| ||||| || || |||||| ||||| || | Sbjct 47964258 TCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGGC 47964199 Query 84586 GCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCA 84645 ||||||| ||||| | ||||||||| ||||||||||| ||| | | |||||| | Sbjct 47964198 GCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTA 47964139 Query 84646 GGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTG 84705 |||||| | |||| || | |||||| |||||||| |||| |||||| || | | || Sbjct 47964138 AGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACAGATG 47964079 Query 84706 CTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCAC 84765 | ||||||||||| || || ||||| | || || || ||| | |||| | |||| Sbjct 47964078 CAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCAC 47964019 Query 84766 CAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAA 84825 ||||||| || |||||||| || | | |||||||| || |||||||| ||||| |||| Sbjct 47964018 CAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAA 47963959 Query 84826 TATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGA 84884 |||| ||||| || ||| | | ||| || || || || || || ||| || | | || Sbjct 47963958 TATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA-AGTTGCGGTCAATAAG 47963900 Query 84885 GTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACC 84944 || || ||||| | | || ||||| || | || | |||||| | ||| || | | Sbjct 47963899 GTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGGTGCTAGTTATC 47963840 Query 84945 CAATCACAGAAG 84956 || | |||||| Sbjct 47963839 CAGTTGCAGAAG 47963828 Score = 560 bits (620), Expect = 1e-154 Identities = 651/876 (74%), Gaps = 3/876 (0%) Strand=Plus/Plus Query 83976 AGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCA 84035 ||||| | |||||||| || || |||||||||||||| |||||||||||||| ||| Sbjct 76202004 AGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCA 76202063 Query 84036 CGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGA 84095 || || | | || ||||| ||||| | ||| | ||| ||||| || | || Sbjct 76202064 CGGTTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTACGGATTGG 76202123 Query 84096 TTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAA 84155 ||||| || |||||||| || || |||||||| | |||| ||| | ||||| ||||| Sbjct 76202124 TTGAAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGTGAACCAG 76202183 Query 84156 ATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAA 84215 || || | || ||||||||||||||||| | ||| | ||||||| |||||||| | Sbjct 76202184 ATCCCTATGACAGGCCAAGCAGCCAAGAAGATGTGTAAAGAACGAGAGTTGTTGAAACTA 76202243 Query 84216 GCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCC 84275 ||||| |||||||| | |||| || || || |||||||| ||||| |||||||| || Sbjct 76202244 GCATATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCT 76202303 Query 84276 TCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATT 84335 || |||||||| || |||||||| | || || ||||||| || ||||| | ||| Sbjct 76202304 TCATCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCGCTGATC 76202363 Query 84336 AGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCA 84395 | | ||| || || | ||||||||||| ||| |||||| | || |||||||||||| Sbjct 76202364 AAACTAGAGGTTACCAAGGAACCATGCATAGCATTGAATAGGGAACCGCCGAATACACCA 76202423 Query 84396 GCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGC 84455 || || || ||||||||||| ||||||||||||||||| ||||| |||| || |||| | Sbjct 76202424 GCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAATACAATC 76202483 Query 84456 AT-GTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCC 84514 || ||||||| || || || || |||| |||| |||||||||||| ||||| || Sbjct 76202484 ATAAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTCCTTGACC 76202543 Query 84515 GAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACA 84574 | ||||| | | ||| ||||||| || ||||||| |||| || || |||||| Sbjct 76202544 AATAGGATGAATCAAGAAAACAGCAGTAGCAACTGCAACATGAGCTGAATATGCAACAAC 76202603 Query 84575 GATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAA 84634 ||||| || |||||||| ||||| | ||||||||| ||||||||||| ||| | Sbjct 76202604 AATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGC 76202663 Query 84635 TGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTC 84694 |||||||| | |||||| | |||| || |||||||| || ||||| |||| |||||| Sbjct 76202664 TGCACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATTGTATAACCATTC 76202723 Query 84695 GTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGG 84754 || | | ||| |||||||||| || || ||||| | || || || |||| | || Sbjct 76202724 ATCAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGCCGTAGAAGTAGG 76202783 Query 84755 AACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACG 84814 || | ||||||||||| || |||||||| || | | ||||||| ||| |||||||| Sbjct 76202784 AATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCA--GACAGGCTCACG 76202841 Query 84815 GATACCGTCAATATCAACTGGGGGTGCACCAACGAA 84850 ||||| | |||||| ||||| || ||| | | ||| Sbjct 76202842 AATACCATAAATATCTACTGGAGGAGCAGCGATGAA 76202877 >seq17829 Length=1032 Score = 612 bits (678), Expect = 2e-170 Identities = 721/973 (74%), Gaps = 2/973 (0%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||| ||||| || |||||||| ||||| |||||||||||||| ||||| |||| Sbjct 995 GGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATA 936 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||||||||| | ||||| ||| ||||| || | || || || || Sbjct 935 ATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGATTGGTTAAAATTG 876 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| | ||| || ||||| ||||| | ||| | || | |||||| || || || Sbjct 875 AAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAACCAGATACCTACT 816 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||| | || || || | ||||||| ||||||||| ||||| ||| Sbjct 815 ACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTGAAACTCGCATATTGG 756 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || |||||||| ||||||||||| ||||| || |||||| Sbjct 755 AAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTTCTTCCTCTTGA 696 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || |||||||||| ||||| | ||| | | |||| Sbjct 695 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 636 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||| ||||| ||| |||||| | || |||||||||||||| || || Sbjct 635 GTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCT 576 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||| || ||||| || ||||| || |||| ||| ||||| Sbjct 575 AACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAGTTG 516 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || || ||||| ||||| || ||| ||||| || | || || Sbjct 515 AAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCTTGACCTATTGGGTAG 456 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||||| || |||||||| ||||| || || |||||| ||||| || Sbjct 455 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGG 396 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| |||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 395 CGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGT 336 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| | |||| |||| ||| || || ||||| |||| |||||| || | | Sbjct 335 AAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAACCATTCATCAACGGAT 276 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || |||||||| || ||||| || || | ||||||||| ||| | |||| | |||| Sbjct 275 GCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCAGAAGTAGGAATAATGGCA 216 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 |||||||| || |||||||| || | ||||| |||| || |||||||| ||||| ||| Sbjct 215 CCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGAATACCATCA 156 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||| ||||| || ||| ||| ||| || || || || ||||| ||| || | | || Sbjct 155 ATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA-AGTTGCGGTCAATAA 97 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 || || ||||| | | |||||||| |||| || | |||||| | |||| ||| | Sbjct 96 GGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTAT 37 Query 84944 CCAATCACAGAAG 84956 ||| | ||||||| Sbjct 36 CCAGTTACAGAAG 24 >seq3 Length=300915289 Score = 248 bits (274), Expect = 1e-60 Identities = 294/398 (74%), Gaps = 3/398 (1%) Strand=Plus/Plus Query 84000 TTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGTACATCGGCCCAGGTA 84059 |||||| |||| || |||||||||||||| ||||| || | | ||| ||||| ||| Sbjct 227133892 TTACGTCCGTGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTA 227133951 Query 84060 TTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTAAATCCATTCAGATTA 84119 || | ||| | ||| ||||| || | || ||||| || |||||||| || || Sbjct 227133952 TTAATAACGTGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTG 227134011 Query 84120 AATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCC 84179 ||||||| || |||| ||| | || || ||||| || || || || |||||||||||| Sbjct 227134012 AATGCCACAGTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCC 227134071 Query 84180 AAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCG 84239 ||||| ||| | ||||||| |||||||| |||||| |||||||| | | ||| Sbjct 227134072 AAGAA---GTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCAACCA 227134128 Query 84240 AAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCA 84299 || || || |||||||| ||||| |||||||| || ||||||||||| || |||||||| Sbjct 227134129 AAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCT 227134188 Query 84300 TAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCA 84359 | || || ||||||| || ||||| | ||| | | ||| || || | |||||| Sbjct 227134189 TCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCA 227134248 Query 84360 TGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGC 84397 ||||| ||| |||||| | || |||||||||||||| Sbjct 227134249 TGCATAGCACTGAATAGGGAACCGCCGAATACACCAGC 227134286 Score = 228 bits (252), Expect = 9e-55 Identities = 227/294 (77%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 84384 CCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCC 84443 |||||||||||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790 Query 84444 TGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAA 84503 ||||| |||| ||| ||||||| || || || || || | ||||| |||||||||||| Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850 Query 84504 GAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAG 84563 ||||| || | |||||| | | ||| ||||||| | |||||||| ||||| || Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGTAGCTGCAACAGGAGCTGAA 228897910 Query 84564 TAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCC 84623 || |||||| ||||| || |||||||| ||||| | ||||||||| ||||||||| Sbjct 228897911 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 228897970 Query 84624 ATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCA 84677 || ||| | | |||||| | |||||| | |||| || | |||||| ||| Sbjct 228897971 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCA 228898024 Score = 206 bits (228), Expect = 3e-48 Identities = 227/302 (75%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| | ||| ||||| || | | Sbjct 48260071 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCAACCTTGACTATCAACTACAGAT 48260012 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || || ||||| || || |||||||| || |||| ||| | ||||| ||| Sbjct 48260011 TGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 48259952 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||||||||| ||||| | ||||||| |||||||| Sbjct 48259951 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 48259892 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | ||||| || || ||||||||||| |||||||||||||| Sbjct 48259891 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATATTATAAGTC 48259832 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || ||||| ||||| || |||||||| | || || ||||||| || ||||| | | Sbjct 48259831 TCTTCTTCCTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 48259772 Query 84333 AT 84334 || Sbjct 48259771 AT 48259770 >seq6 Length=240577051 Score = 199 bits (220), Expect = 5e-46 Identities = 282/394 (72%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 84564 TAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCC 84623 || |||||| ||||| || |||||||| ||||| | ||||||||| ||||||||| Sbjct 76929302 TATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 76929243 Query 84624 ATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTA 84683 || ||| | | |||||| | |||||| | |||| || | |||||| |||||||| Sbjct 76929242 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 76929183 Query 84684 TATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCA 84743 |||| |||||| || | | ||| ||||||||||| || || ||||| | || || || Sbjct 76929182 TATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCC 76929123 Query 84744 TTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCG 84803 ||| | |||| | ||||||||||| || |||||||| || | | |||||||| Sbjct 76929122 GCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAA 76929063 Query 84804 ACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA- 84862 || |||||||| ||||| |||||||| ||||| || ||| | | ||| || || || || Sbjct 76929062 ACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAAT 76929003 Query 84863 ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGAT 84922 || || ||| || | | || || || ||||| | | || ||||| || | || | Sbjct 76929002 ACGGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAG 76928944 Query 84923 ACGGTTGTTAGTGGAGGTGACCCAATCACAGAAG 84956 |||||| | |||| || | ||| | |||||| Sbjct 76928943 ACGGTTTTCAGTGCTAGTTATCCAGTTGCAGAAG 76928910 Score = 125 bits (138), Expect = 8e-24 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||||||||| || |||||||||||||| |||||||||||||| Sbjct 71012520 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 71012579 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| ||||| | ||| || ||| ||||| || | Sbjct 71012580 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 71012639 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCA 84146 || ||||| || |||||||| || ||||||||||| || |||| ||| | |||| Sbjct 71012640 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCA 71012693 >seq10791 Length=2543 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 149448 TGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAA 149507 |||||| | ||||||||||||||||| || | ||||||| | |||| ||| ||||||||| Sbjct 1546 TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA 1605 Query 149508 TCCACCTCCCGC 149519 |||| ||||||| Sbjct 1606 TCCAGCTCCCGC 1617 >seq5428 Length=272540 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 84441 GCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAG 84500 |||||||| |||| ||| ||||||| || || || || || | |||| |||||||||| Sbjct 118629 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCACGCCATCAGAG 118570 Query 84501 AAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAAC 84553 ||| ||||| || | |||||| | | ||| ||||||| || |||||||| Sbjct 118569 AAACTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAAC 118517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571128003782120