Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq17829 554 1e-153 seq4 554 1e-153 seq1 549 6e-152 seq3 210 7e-50 seq6 181 3e-41 seq5428 86.0 2e-12 >seq17829 Length=1032 Score = 554 bits (614), Expect = 1e-153 Identities = 719/989 (73%), Gaps = 6/989 (1%) Strand=Plus/Minus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || |||| || || ||||| || |||||||| ||||| ||||| ||||||||||||||| Sbjct 1010 GCAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 951 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || |||||||| | | ||| ||||| || || | | ||| | ||||| || Sbjct 950 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACG 891 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || || || || || || | ||| |||||||||||| ||| || | | |||| Sbjct 890 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 831 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| || |||||||||||| ||| |||||| Sbjct 830 AACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTG 771 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 770 AAACTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAG 711 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 710 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 651 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | || ||||||||| ||| | | || |||||| Sbjct 650 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 591 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || || |||||||| ||||| || || ||||| ||| Sbjct 590 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 531 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731 || | ||||||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct 530 ACAATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCT 471 Query 5732 TGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790 || || | ||||| | || || || | ||||| | || ||||| || ||||||||||| Sbjct 470 TGACCTATTGGGTAGATCAAGAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATGC 412 Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850 || |||||| || ||||| || | | ||||||||||||| | || |||| ||| Sbjct 411 AACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA 352 Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910 | || | ||||| | |||||| | || | |||| ||||| || |||||||| | Sbjct 351 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAA 292 Query 5911 CCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968 ||||||||| | ||| || |||||||| || ||||| ||||| || ||||| || Sbjct 291 CCATTCATCAACGGAT--GCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCA 234 Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACG 6028 || | || | || ||| || || || || ||||||||||| ||||||||||| | || Sbjct 233 GAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACA 174 Query 6029 GGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCA 6088 || ||||| || || || || || ||||| || ||||| | ||| || | |||||| || Sbjct 173 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA 114 Query 6089 GTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGG 6148 | ||||||||| || | | || ||||| || ||||||||||| || | || || ||| Sbjct 113 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 54 Query 6149 TTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || | ||||| || | ||||| |||||| Sbjct 53 TTTTCAGTGCTGGTTATCCAGTTACAGAA 25 >seq4 Length=191835039 Score = 554 bits (614), Expect = 1e-153 Identities = 707/971 (73%), Gaps = 2/971 (0%) Strand=Plus/Minus Query 5208 GGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGA 5267 ||||||| |||||||| |||||||||||||||||||||||||| || |||||||| | || Sbjct 47964798 GGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGGTTGATGA 47964739 Query 5268 CATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAA 5327 ||| |||||||| || | | ||| | ||||| || || || ||||| || | Sbjct 47964738 TATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTTGAAATTGA 47964679 Query 5328 AGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGA 5387 | || || || ||||| |||||||| || || | || || | ||| || | |||| Sbjct 47964678 ATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGATCCCTACGA 47964619 Query 5388 CGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGA 5447 | ||||||| ||||| |||||| |||||| ||| ||||| || |||||||| |||| Sbjct 47964618 CAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGA 47964559 Query 5448 AGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGC 5507 |||| | || ||||| || |||||||| || ||||||||||| || ||||| ||||| | Sbjct 47964558 AGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGAC 47964499 Query 5508 CGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAG 5567 | ||||| || || | || ||| | |||| ||||| | || | ||| | Sbjct 47964498 CAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGG 47964439 Query 5568 TAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGA 5627 | || | |||||||||||| ||| | | || |||||||| ||||| ||||| | Sbjct 47964438 TTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCTA 47964379 Query 5628 GCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAA 5687 |||||| || |||||||||||||| |||||||||||||||||||| | ||||||||| | Sbjct 47964378 ACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAATCATAAAGTTGA 47964319 Query 5688 AAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATA 5747 |||||||||| || || | ||||||||||||| ||||||||| || || | ||| || | Sbjct 47964318 AAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGATAAA 47964259 Query 5748 CTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGT 5806 || || || | ||||| | || ||||| || ||||||||||| || |||||| || Sbjct 47964258 TCAAGAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGG 47964200 Query 5807 CGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATA 5866 ||||| || | | | ||||||||||||| | || |||| ||| || | ||||| Sbjct 47964199 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGT 47964140 Query 5867 AGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTG 5926 | |||||| | || | || | || || || |||||||| | ||||||||| | | Sbjct 47964139 AAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACAGAT 47964080 Query 5927 GCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCT 5986 || |||||||| || || || || || || || || || || | || | || || Sbjct 47964079 GCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCA 47964020 Query 5987 CCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCG 6046 || || || || ||||||||||| |||| ||| || | || || ||||| || || || Sbjct 47964019 CCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCA 47963960 Query 6047 ATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGT 6106 || || ||||| || ||||| | ||| || | |||||| | | ||||||||| || | Sbjct 47963959 ATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAG 47963900 Query 6107 GCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACC 6166 | || ||||| || ||||| |||||||| | || || ||||| | ||||||||| | | Sbjct 47963899 GTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGGTGCTAGTTATC 47963840 Query 6167 CAGTCACAGAA 6177 |||| ||||| Sbjct 47963839 CAGTTGCAGAA 47963829 Score = 475 bits (526), Expect = 1e-129 Identities = 688/965 (71%), Gaps = 11/965 (1%) Strand=Plus/Plus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| | |||||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 76201997 AGCAGTTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 76202056 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 || |||||||| | || || |||||||| || | ||| | ||||| || Sbjct 76202057 ATTAGCACGGTTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTAC 76202116 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370 || || ||||| || || || || || || || |||||| | || || | || || Sbjct 76202117 GGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGT 76202176 Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430 | ||| || | | ||| ||||||| ||||| ||||| |||||| ||| ||||| Sbjct 76202177 GAACCAGATCCCTATGACAGGCCAAGCAGCCAAGAAGATGTGTAAAGAACGAGAGTTGTT 76202236 Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490 || |||||||| |||||||| | | ||||| || |||||||| || ||||||||||| Sbjct 76202237 GAAACTAGCATATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATA 76202296 Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550 || ||||| ||||| || ||||| || || | || ||| | |||| ||||| Sbjct 76202297 AGTCTCTTCATCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 76202356 Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610 | || | ||| || || | |||||||||||| ||| | | || ||||| Sbjct 76202357 GCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCATTGAATAGGGAACCGCCGAA 76202416 Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670 ||| ||||| ||||| | |||||| || |||||||||||||| ||||||||| |||| || Sbjct 76202417 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAA 76202476 Query 5671 TACGAACATAAA-GTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTC 5729 ||| | |||||| ||| ||||||||||| || |||| | ||||||||||| |||||||| Sbjct 76202477 TACAATCATAAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTC 76202536 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | ||| | | || || || | ||||| | | ||||| | ||||||||| Sbjct 76202537 CTTGACCAATAGGATGAATCAAGAAAACAGCAGTAG-CAACTGCAACATGAGCTGAATAT 76202595 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCA-- 5846 || || |||||| || ||||| || | | | ||||||||||||| | || |||| Sbjct 76202596 GCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATA 76202655 Query 5847 -AGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTG 5905 | ||||||| ||||| | |||||| | || | || || || || || |||||| Sbjct 76202656 TAACAAGCTGC---ACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATTG 76202712 Query 5906 TAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCG 5965 || | ||||||||| | | || ||||||| || || || || || || || ||||| Sbjct 76202713 TATAACCATTCATCAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGCC 76202772 Query 5966 TTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCG 6025 | || | || | || || || || || || ||||||||||| |||| ||| || | Sbjct 76202773 GTAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACC--AG 76202830 Query 6026 ACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAAT 6085 || || ||||| || || | || || ||||| || ||||| | ||| | | |||||| Sbjct 76202831 ACAGGCTCACGAATACCATAAATATCTACTGGAGGAGCAGCGATGAAGGTGATAATAAAT 76202890 Query 6086 GCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGG 6145 | | ||||||||| || | | || ||||| || ||| |||||||| | || || Sbjct 76202891 ACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACATTGAACCACCCGATGTAAAGA 76202950 Query 6146 CGGTT 6150 ||||| Sbjct 76202951 CGGTT 76202955 >seq1 Length=275477322 Score = 549 bits (608), Expect = 6e-152 Identities = 700/961 (73%), Gaps = 2/961 (0%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| |||||||| || |||||||| |||||||| |||||||||||||||||||||||||| Sbjct 183994006 AGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAG 183993947 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 || |||||||| | || ||| |||||||| || | | ||| | ||||| || Sbjct 183993946 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 183993887 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370 || || ||||| || || || || || ||||| |||||||| || || | || || Sbjct 183993886 GGATTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGT 183993827 Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430 | ||| || | ||||| ||||||| ||||| |||||| |||||| ||| ||||| Sbjct 183993826 GAACCAGATCCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 183993767 Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490 || |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| Sbjct 183993766 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATA 183993707 Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550 || ||||| ||||| || ||||| || || | || ||| | |||| ||||| Sbjct 183993706 AGTCTCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTC 183993647 Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610 | || | ||| || || | |||||||||||| ||| | | || ||||| Sbjct 183993646 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 183993587 Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670 ||| ||||| ||||| | |||||| || |||||||||||||| ||||||||||||||||| Sbjct 183993586 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAA 183993527 Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730 ||| | ||||||||| ||||||||||| || || | ||||||||||||| ||||||||| Sbjct 183993526 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 183993467 Query 5731 CTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATG 5789 || || | ||| || | || || || | ||||| | || ||||| || |||||||||| Sbjct 183993466 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATG 183993408 Query 5790 CTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGT 5849 | || |||||| || ||||| || | | | ||||||||||||| | || |||| | Sbjct 183993407 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 183993348 Query 5850 AAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAA 5909 || || | ||||| | |||||| | || | || | || || || |||||||| | Sbjct 183993347 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATA 183993288 Query 5910 GCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGG 5969 ||||||||| | | || |||||||| || || || || || || || || || | Sbjct 183993287 ACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAG 183993228 Query 5970 AGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGG 6029 | | || | || || || || || || ||||||||||| |||| ||| || | || | Sbjct 183993227 AAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAG 183993168 Query 6030 GTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAG 6089 | ||||| || || || || || ||||| || ||||| | ||| || | |||||| | | Sbjct 183993167 GCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGG 183993108 Query 6090 TAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGT 6149 ||||||||| || | | || ||||| || ||||| |||||||| | || || |||| Sbjct 183993107 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGT 183993048 Query 6150 T 6150 | Sbjct 183993047 T 183993047 Score = 219 bits (242), Expect = 1e-52 Identities = 358/513 (70%), Gaps = 2/513 (0%) Strand=Plus/Plus Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||||||||| ||||||||||| || || | ||||||||||| | |||| Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | ||| || | || || || | |||| || || |||| | ||||| Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGTAGTA-GCAGCTACAACAGCAGCTGA 150871279 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || ||||| || | | | ||||||||||||| | || || Sbjct 150871280 ATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 150871339 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 || ||| || | ||||| | |||||| || | || | || || || ||||| Sbjct 150871340 CATATAACAAGCTACACCAAGTAAGAAGTGTGGAACAATTAGCTCATAAGGACCACCATT 150871399 Query 5905 GTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGC 5964 ||| | ||||||||| | | || |||||||| || || || || || || || || || Sbjct 150871400 GTATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGC 150871459 Query 5965 GTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGC 6024 || | || | || || || | || || ||||||||||| |||| ||| || | Sbjct 150871460 CGCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACCAGA 150871519 Query 6025 GACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAA 6084 || | |||| || || || || || ||| | || ||||| | ||| | | ||||| Sbjct 150871520 AACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAAGGTGATAATAAA 150871579 Query 6085 TGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAG 6144 | | | ||||||||| || | | || ||| | || ||||| |||||||| | || || Sbjct 150871580 TACGGAAGTTGCGGTCAATAAGGTAGGGATCGTCAAAACACCGAACCACCCGATGTAAAG 150871639 Query 6145 GCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 |||| | ||||||||| | | ||| ||||| Sbjct 150871640 ATGGTTTTCGGTGCTAGTTATCTAGTTGCAGAA 150871672 >seq3 Length=300915289 Score = 210 bits (232), Expect = 7e-50 Identities = 210/270 (78%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||||| ||||| | |||||| || |||||||||||||| |||||||||||| Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||||||||| ||||||||||| || || | ||||||||||||| |||| Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | ||| || | || || || | |||| | || ||||| || ||||| Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTA-GTAGCTGCAACAGGAGCTGA 228897909 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || ||||| || | | | ||||||||||||| | || || Sbjct 228897910 ATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 228897969 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTG 5874 || ||| || | ||||| | |||||| Sbjct 228897970 CATATAACAAGCTACACCAAGTAAGAAGTG 228897999 Score = 170 bits (188), Expect = 6e-38 Identities = 277/398 (70%), Gaps = 3/398 (1%) Strand=Plus/Plus Query 5222 TTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTG 5281 || ||| |||| ||||||||||||||||| || |||||||| | || ||| |||||||| Sbjct 227133892 TTACGTCCGTGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTA 227133951 Query 5282 GGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTA 5341 || | ||| | ||||| || || || ||||| || || || || || || Sbjct 227133952 TTAATAACGTGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTG 227134011 Query 5342 AAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCC 5401 || |||| ||| || || | || || | ||| || | ||||| ||||||| |||| Sbjct 227134012 AATGCCACAGTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCC 227134071 Query 5402 AGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 5461 | |||| |||||| ||| ||||| || |||||||| |||||||| | || ||| Sbjct 227134072 AAGAAG---TGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCAACCA 227134128 Query 5462 AAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCA 5521 || || |||||||| || ||||||||||| || ||||| ||||| || ||||| || || Sbjct 227134129 AAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCT 227134188 Query 5522 TAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCA 5581 | || ||| | |||| ||||| | || | ||| || || | ||| Sbjct 227134189 TCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCA 227134248 Query 5582 TGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGC 5619 ||||||||| ||| | | || |||||||| ||||| Sbjct 227134249 TGCATAGCACTGAATAGGGAACCGCCGAATACACCAGC 227134286 Score = 100 bits (110), Expect = 9e-17 Identities = 77/90 (86%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| |||||||| || ||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 9136020 AGCAGCTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCGTACCAAG 9135961 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGT 5280 || ||||||| | || ||| ||||| || Sbjct 9135960 ATT-ACACGGTTGATGATATCAGCCCATGT 9135932 >seq6 Length=240577051 Score = 181 bits (200), Expect = 3e-41 Identities = 279/398 (70%), Gaps = 0/398 (0%) Strand=Plus/Minus Query 5780 GCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGG 5839 ||| ||||||| || |||||| || ||||| || | | | ||||||||||||| | Sbjct 76929308 GCTCAATATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCA 76929249 Query 5840 CGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCT 5899 || |||| ||| || | ||||| | |||||| | || | || | || || || Sbjct 76929248 CGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCA 76929189 Query 5900 CCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCA 5959 |||||||| | ||||||||| | | || |||||||| || || || || || || || Sbjct 76929188 CCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCG 76929129 Query 5960 ATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGAT 6019 || || || | || | || || || || || || ||||||||||| |||| ||| Sbjct 76929128 ATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAA 76929069 Query 6020 CCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAAT 6079 || | || || ||||| || || || || || ||||| || ||||| | ||| || | Sbjct 76929068 CCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATA 76929009 Query 6080 ATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACA 6139 |||||| | | ||||||||| || | | || ||||| || ||||| |||||||| | Sbjct 76929008 ATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATG 76928949 Query 6140 TAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || || ||||| | |||||||| | ||||| ||||| Sbjct 76928948 TAAAGACGGTTTTCAGTGCTAGTTATCCAGTTGCAGAA 76928911 Score = 131 bits (144), Expect = 5e-26 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| |||||||| || |||||||| |||||||| |||||||||||||||||||||||||| Sbjct 71012516 AGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAG 71012575 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 || |||||||| | || ||| |||||||| || | | ||| | ||||| || Sbjct 71012576 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 71012635 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGT 5352 || || ||||| || || || || || ||||| |||||||| Sbjct 71012636 GGATTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGT 71012677 >seq5428 Length=272540 Score = 86.0 bits (94), Expect = 2e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 5662 TGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACT 5721 |||||||||||| | ||||||||| ||||||||||| || || | ||||| |||||| Sbjct 118630 TGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCACGCCATCAGA 118571 Query 5722 GAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACC 5776 ||||||||| || || | ||| || | || || || | |||| || || |||||| Sbjct 118570 GAAACTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTA-GCAGCTGCAACC 118516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152612640574254