Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_016659.1
Length=47536
Score E
Sequences producing significant alignments: (Bits) Value
seq17829 565 8e-157
seq4 527 2e-145
seq1 527 2e-145
seq3 205 3e-48
seq6 176 1e-39
seq5428 98.7 3e-16
seq7 93.3 1e-14
>seq17829
Length=1032
Score = 565 bits (626), Expect = 8e-157
Identities = 715/983 (73%), Gaps = 0/983 (0%)
Strand=Plus/Minus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||||||| |||||||| || || || ||||| ||||||||||||||||| || | ||
Sbjct 1007 GCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 948
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
|||||||||| ||| |||||||| || | || | || | |||||| || ||
Sbjct 947 GCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 888
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| || || || || || || | ||| |||||||||||| || || | ||||||| |
Sbjct 887 TGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAAC 828
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | || ||||||||||| || |||||||||||| ||| ||| || ||
Sbjct 827 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTGAAA 768
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|| ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| ||
Sbjct 767 CTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTT 708
Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812
||||| ||||| |||||| | || || | || ||||||| | || ||||| |
Sbjct 707 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 648
Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872
|| | ||||| || | |||||||||||| ||||| | || ||||||||
Sbjct 647 ATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACA 588
Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 25932
|| || ||||| | ||| || || || |||||||| ||||| || || |||||||| |||
Sbjct 587 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATACA 528
Query 25933 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 25992
| |||||| |||||||| || ||||| || |||||||||||||| || ||||| |||||
Sbjct 527 ATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCTTGA 468
Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052
|| | ||||||| ||||| |||||| || ||||||||||| |||||||| || |||
Sbjct 467 CCTATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 408
Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112
||||| || | ||| || || | | ||||||||||||| | || |||| ||||
Sbjct 407 GCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAA 348
Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172
| | || | | ||||| | ||||| |||| |||||| || || || || |||||
Sbjct 347 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAACCAT 288
Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232
|| || | || |||||||||||| ||||| || ||||| | ||| || || ||| |
Sbjct 287 TCATCAACGGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCAGAAGTA 228
Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292
|| | || || || || || || ||||||||||| |||| | ||| || |||||||||
Sbjct 227 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCA 168
Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352
||||||||||| ||||| || ||||| ||||||| || || || | |||| | | |
Sbjct 167 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 108
Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412
|| || || | | ||||||||| | || |||||||| || | || || ||||| |
Sbjct 107 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCA 48
Query 26413 GTACTTGTAACCCAGTCACATAA 26435
|| || || | ||||| ||| ||
Sbjct 47 GTGCTGGTTATCCAGTTACAGAA 25
>seq4
Length=191835039
Score = 527 bits (584), Expect = 2e-145
Identities = 704/974 (72%), Gaps = 6/974 (1%)
Strand=Plus/Minus
Query 25458 GTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACG 25517
||| ||| ||||||| || || ||||| || ||||| |||||||| || | | |||||
Sbjct 47964806 GTCTAGAAGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACG 47964747
Query 25518 GTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACTGATT 25577
||| | || ||||||||||| | || | || | |||||| || || || ||
Sbjct 47964746 GTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTT 47964687
Query 25578 GAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATAT 25637
||| || || || || || ||||| |||||||| | || | ||| || | ||| ||
Sbjct 47964686 GAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGAT 47964627
Query 25638 GCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGC 25697
| ||| ||||||||||||| |||||| |||||| ||| || || || |||||
Sbjct 47964626 CCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGC 47964567
Query 25698 ATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTC 25757
||| |||||||| | || ||||| || |||||||| || ||||||||||| ||||||||
Sbjct 47964566 ATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTC 47964507
Query 25758 TTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--A 25815
|||||| || ||||| || || | || ||| ||| |||| ||||| | || |
Sbjct 47964506 TTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAA 47964447
Query 25816 AGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCC 25874
| | |||| || |||| || ||||||||| ||||| | || |||||||| ||
Sbjct 47964446 ACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAATACACC 47964390
Query 25875 TGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAA 25934
|| ||||| | ||| || || |||||||||||||| |||||||||||||| || ||||
Sbjct 47964389 AGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAAT 47964330
Query 25935 CATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCC 25994
|||||| |||||||| || || || || | ||||||||||||||||||||| ||||| ||
Sbjct 47964329 CATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACC 47964270
Query 25995 AAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACA 26054
|| ||| || | ||||| |||||| || ||||||||||| |||||||| || |||
Sbjct 47964269 AATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGC 47964210
Query 26055 TATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGA 26114
||||| || | ||| || || | ||||||||||||| | || |||| ||| |
Sbjct 47964209 AATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGC 47964150
Query 26115 GATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTC 26174
| || | | ||||| | ||||| || | ||| || ||||| || || ||||| ||
Sbjct 47964149 TACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTC 47964090
Query 26175 GTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGG 26234
|| | | |||||||||||| |||||||| || || | ||||| || ||| | ||
Sbjct 47964089 ATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAGG 47964030
Query 26235 GACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACG 26294
| || || || || || || ||||||||||| ||||| | || || |||||||||||
Sbjct 47964029 AATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACG 47963970
Query 26295 AATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGC 26354
||||||||| ||||| || ||||| ||||| | || || || | |||| | | |||
Sbjct 47963969 AATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGC 47963910
Query 26355 TGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGT 26414
|| || | | ||||||||| | || || |||||||| | || || ||||| | ||
Sbjct 47963909 GGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGGT 47963850
Query 26415 ACTTGTAACCCAGT 26428
|| || | |||||
Sbjct 47963849 GCTAGTTATCCAGT 47963836
Score = 470 bits (520), Expect = 4e-128
Identities = 683/956 (71%), Gaps = 13/956 (1%)
Strand=Plus/Plus
Query 25459 TCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACGG 25518
|| |||||||||||||| || ||||| || ||||| |||||||| || | | ||||||
Sbjct 76202007 TCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGG 76202066
Query 25519 TTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACTGATTG 25578
|| | || | ||||||||| | || || | |||||| || || || |||
Sbjct 76202067 TTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTACGGATTGGTTG 76202126
Query 25579 AAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATG 25638
|| || || || || || || || |||||| | | || | ||| || | ||| ||
Sbjct 76202127 AAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGTGAACCAGATC 76202186
Query 25639 CAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCA 25698
| |||| ||||||||||||| ||||| |||||| ||| || || || ||||||
Sbjct 76202187 CCTATGACAGGCCAAGCAGCCAAGAAGATGTGTAAAGAACGAGAGTTGTTGAAACTAGCA 76202246
Query 25699 TACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCT 25758
|| |||||||| | | ||||| || |||||||| || ||||||||||| ||||||||
Sbjct 76202247 TATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCA 76202306
Query 25759 TCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--AA 25816
||||| || ||||| || || | || ||| ||| |||| ||||| | || ||
Sbjct 76202307 TCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCGCTGATCAAA 76202366
Query 25817 GT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCT 25875
| |||| || |||| || ||||||||| ||||| | || |||||||| ||
Sbjct 76202367 CTAGAGG--TTACCAAG-GAACCATGCATAGCATTGAATAGGGAACCGCCGAATACACCA 76202423
Query 25876 GCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAAC 25935
|| ||||| | ||| || || |||||||||||||| ||||||||| ||||||| |||| |
Sbjct 76202424 GCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAATACAATC 76202483
Query 25936 ATAAAA-TTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCC 25994
|||||| |||||||| || || || |||| | ||||||||||||||||||| ||||| ||
Sbjct 76202484 ATAAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTCCTTGACC 76202543
Query 25995 AAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACA 26054
|| ||| | | ||||| |||||| || |||||||| | |||||||| || |||
Sbjct 76202544 AATAGGATGAATCAAGAAAACAGCAGTAGCAACTGCAACATGAGCTGAATATGCAACAAC 76202603
Query 26055 TATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCTGA 26114
||||| || | ||| || || | ||||||||||||| | || |||| ||| |
Sbjct 76202604 AATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA--CAA 76202661
Query 26115 GATG--CCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172
| || || | | ||||| | ||||| || ||||| || || || || || |||||
Sbjct 76202662 GCTGCACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATTGTATAACCAT 76202721
Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232
|| || | | |||| ||||||| |||||||| || || | |||||||| |||| |
Sbjct 76202722 TCATCAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGCCGTAGAAGTA 76202781
Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292
|| | || || || || || || ||||||||||| ||||| | || |||||||||||
Sbjct 76202782 GGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACC--AGACAGGCTCA 76202839
Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352
|||||||||| ||||| || ||||| ||||| | || | || | |||| | | |
Sbjct 76202840 CGAATACCATAAATATCTACTGGAGGAGCAGCGATGAAGGTGATAATAAATACGGAAGTT 76202899
Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 26408
|| || || | | ||||||||| | || |||||||| | || || |||||
Sbjct 76202900 GCGGTCAATAAGGTAGGGATCATCAAAACATTGAACCACCCGATGTAAAGACGGTT 76202955
>seq1
Length=275477322
Score = 527 bits (584), Expect = 2e-145
Identities = 695/959 (72%), Gaps = 6/959 (1%)
Strand=Plus/Minus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| || ||||||||||| || || ||||| || ||||| |||||||| || | |
Sbjct 183994002 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 183993943
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
|||||||| | || ||||||||||| | || | || | |||||| || ||
Sbjct 183993942 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 183993883
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || ||||| |||||||| | || | ||| || | |
Sbjct 183993882 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAAC 183993823
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | ||| ||||||||||||| |||||| |||||| ||| || || ||
Sbjct 183993822 CAGATCCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 183993763
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|||||||| |||||||| | || ||||| || |||||||| || ||||||||||| |||
Sbjct 183993762 CTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTC 183993703
Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812
||||||||||| || ||||| || || | || ||| ||| |||| ||||| |
Sbjct 183993702 TCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 183993643
Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869
|| || | |||| || |||| || ||||||||| ||||| | || ||||||
Sbjct 183993642 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAAT 183993586
Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929
|| || || ||||| | ||| || || |||||||||||||| |||||||||||||| ||
Sbjct 183993585 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAAT 183993526
Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989
|||| |||||| |||||||| || || || || | ||||||||||||||||||||| |||
Sbjct 183993525 ACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 183993466
Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049
|| |||| ||| || | ||||| |||||| || ||||||||||| |||||||| ||
Sbjct 183993465 TGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 183993406
Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109
||| ||||| || | ||| || || | ||||||||||||| | || |||| |||
Sbjct 183993405 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA 183993346
Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169
| | || | | ||||| | ||||| || | ||| || ||||| || || |||
Sbjct 183993345 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 183993286
Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229
|| || || | | |||||||||||| |||||||| || || | ||||| || |||
Sbjct 183993285 CATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAA 183993226
Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289
| || | || || || || || || ||||||||||| ||||| | || || ||||||
Sbjct 183993225 GTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGC 183993166
Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349
|||||||||||||| ||||| || ||||| ||||| | || || || | |||| | |
Sbjct 183993165 TCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAA 183993106
Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 26408
||| || || | | ||||||||| | || || |||||||| | || || |||||
Sbjct 183993105 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTT 183993047
Score = 224 bits (248), Expect = 3e-54
Identities = 335/472 (71%), Gaps = 4/472 (1%)
Strand=Plus/Plus
Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983
|| || |||| |||||| |||||||| || || || || | ||||||||||| |||||||
Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220
Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043
|| ||||| |||| ||| || | ||||| |||| | || ||| |||||| ||||||
Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGTAGTAGCAGCTACAACAGCAGCTGAA 150871280
Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103
|| || ||| ||||| || | ||| || || | ||||||||||||| | || |||
Sbjct 150871281 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 150871340
Query 26104 AAGTAAGCTGAGATGCCGA-TGAGAA-AGTGGAACACAATAAGTTGATATGGTCCACCGT 26161
| ||| | | || | | |||| ||||| ||||| || | ||| || ||||| |
Sbjct 150871341 ATATAACAAGCTACACCAAGTAAGAAGTGTGGA--ACAATTAGCTCATAAGGACCACCAT 150871398
Query 26162 TATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTG 26221
| || ||||| || || | | |||||||||||| |||||||| || || | ||||| |
Sbjct 150871399 TGTATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCG 150871458
Query 26222 CGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTG 26281
| ||| | || | || || || | || || ||||||||||| ||||| | || |
Sbjct 150871459 CCGCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACCAG 150871518
Query 26282 AGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAA 26341
| ||| |||||| ||||||||| ||||| || |||| ||||| | || | || | ||
Sbjct 150871519 AAACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAAGGTGATAATAA 150871578
Query 26342 ATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCC 26393
|| | | ||| || || | | ||||||| | | || || ||||||||
Sbjct 150871579 ATACGGAAGTTGCGGTCAATAAGGTAGGGATCGTCAAAACACCGAACCACCC 150871630
Score = 82.4 bits (90), Expect = 2e-11
Identities = 145/208 (70%), Gaps = 5/208 (2%)
Strand=Plus/Plus
Query 26197 ATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC--GGGACGATTGCCCCTGAGATGA 26254
|||||||| || || || || |||| |||| || || | || || || || || |
Sbjct 21980745 ATTGGGTAAAAATGCAGTTCGGTTGCCGTAGAA-ACTAGGAATAATAGCACCAGAAATAA 21980803
Query 26255 TGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGG 26314
| ||||||||| ||||| | || || | |||||||||||||||||| | ||| || |
Sbjct 21980804 TA--GTTTCCATAAAGTAAAGAGCCAGAAATAGGCTCACGAATACCATCAACATCTACTG 21980861
Query 26315 GAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCA 26374
|||| |||||||| || || | | |||| | | ||| || || | | ||||||||
Sbjct 21980862 GAGGAGCAGCAACGAAGGCGGTAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCA 21980921
Query 26375 TTAGTACCCCAAACCACCCCACATAGAG 26402
| | | | |||||||| | |||||
Sbjct 21980922 TCAAAATAACGAACCACCCGATGTAGAG 21980949
>seq3
Length=300915289
Score = 205 bits (226), Expect = 3e-48
Identities = 190/241 (79%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 25923
|||||||| || || ||||| | ||| || || |||||||||||||| ||||||||||||
Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790
Query 25924 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 25983
|| || |||| |||||| |||||||| || || || || | |||||||||||||||||||
Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850
Query 25984 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 26043
|| ||||| |||| ||| || | ||||| |||||| | ||||||||||| ||||||
Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGTAGCTGCAACAGGAGCTGAA 228897910
Query 26044 TAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 26103
|| || ||| ||||| || | ||| || || | ||||||||||||| | || |||
Sbjct 228897911 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 228897970
Query 26104 A 26104
|
Sbjct 228897971 A 228897971
Score = 141 bits (156), Expect = 3e-29
Identities = 275/401 (69%), Gaps = 9/401 (2%)
Strand=Plus/Plus
Query 25480 TTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTT 25539
||||| | || || |||||||| || | | |||||||| | || |||||||||||
Sbjct 227133892 TTACGTCCGTGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTA 227133951
Query 25540 GGGACGACTCTTCCGTTGGAATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTA 25599
| || || | |||||| || || || ||||| || || || || || ||
Sbjct 227133952 TTAATAACGTGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTG 227134011
Query 25600 AAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCC 25659
|| |||| ||| | || | || || | ||| || | ||| ||||||||||||
Sbjct 227134012 AATGCCACAGTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCC 227134071
Query 25660 AGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 25719
| |||| |||||| ||| || || || |||||||| |||||||| | || |||
Sbjct 227134072 AAGAAG---TGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCAACCA 227134128
Query 25720 AAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCA 25779
|| || |||||||| || ||||||||||| |||||||||||||| || ||||| || ||
Sbjct 227134129 AAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCT 227134188
Query 25780 TAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAAT--AAGT-GAGGAAGTAACAAGACTT 25836
| || ||| ||| |||| ||||| | || || | |||| || ||||
Sbjct 227134189 TCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGG--TTACCAAG-GAA 227134245
Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGC 25877
|| ||||||||| ||||| | || |||||||| || ||
Sbjct 227134246 CCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGC 227134286
Score = 132 bits (146), Expect = 1e-26
Identities = 189/266 (71%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
|||||||| | || ||||||||||| | || | || | |||||| || ||
Sbjct 48260071 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCAACCTTGACTATCAACTACAGAT 48260012
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || || || |||||||| | || | ||| || | |
Sbjct 48260011 TGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 48259952
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | || ||||||||||||| |||||| |||||| ||| || || ||
Sbjct 48259951 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 48259892
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|||||||| |||||||| | || ||||| || || ||||| || ||||| ||||| |||
Sbjct 48259891 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATATTATAAGTC 48259832
Query 25753 TCTTCTTCTTGGCCGAATTTATATCC 25778
|||||||| || || ||||| || ||
Sbjct 48259831 TCTTCTTCCTGACCAAATTTGTAACC 48259806
>seq6
Length=240577051
Score = 176 bits (194), Expect = 1e-39
Identities = 274/392 (70%), Gaps = 0/392 (0%)
Strand=Plus/Minus
Query 26037 GGCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTG 26096
|||| |||| || ||| ||||| || | ||| || || | ||||||||||||| |
Sbjct 76929309 GGCTCAATATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTC 76929250
Query 26097 TCGTCCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCC 26156
|| |||| ||| | | || | | ||||| | ||||| || | ||| || ||
Sbjct 76929249 ACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACC 76929190
Query 26157 ACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACC 26216
||| || || ||||| || || | | |||||||||||| |||||||| || || | ||
Sbjct 76929189 ACCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCC 76929130
Query 26217 GATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGC 26276
||| || ||| | || | || || || || || || ||||||||||| ||||| |
Sbjct 76929129 GATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGA 76929070
Query 26277 TCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAAT 26336
|| || |||||||||||||||||||| ||||| || ||||| ||||| | || || ||
Sbjct 76929069 ACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGAT 76929010
Query 26337 TAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCAC 26396
| |||| | | ||| || || | | ||||||||| | || || |||||||| |
Sbjct 76929009 AATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGAT 76928950
Query 26397 ATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 26428
|| || ||||| | || || || | |||||
Sbjct 76928949 GTAAAGACGGTTTTCAGTGCTAGTTATCCAGT 76928918
Score = 87.8 bits (96), Expect = 5e-13
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| || ||||||||||| || || ||||| || ||||| |||||||| || | |
Sbjct 71012520 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 71012579
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
|||||||| | || ||||||||||| | || | || | |||||| || ||
Sbjct 71012580 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 71012639
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGT 25610
|| ||||| || || || || || ||||| ||||||||
Sbjct 71012640 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGT 71012677
>seq5428
Length=272540
Score = 98.7 bits (108), Expect = 3e-16
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 25920 TGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGA 25979
|||||| || |||| |||||| |||||||| || || || || | ||||| ||||||||
Sbjct 118630 TGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCACGCCATCAGA 118571
Query 25980 GAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAAC 26033
|||||| ||||| |||| ||| || | ||||| |||||| || ||||||||
Sbjct 118570 GAAACTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAAC 118517
>seq7
Length=154015841
Score = 93.3 bits (102), Expect = 1e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 25954 GAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAAT 26013
|| || || | ||||||||||||||||||||| ||||| |||| ||| || | |||||
Sbjct 19025408 GATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGATAAATCAAGAAA 19025467
Query 26014 ACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052
|||||| || ||||||||||| |||||||| || |||
Sbjct 19025468 ACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 19025506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151956799404564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |