Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq1 621 4e-173 seq4 609 3e-169 seq17829 553 2e-152 seq3 280 2e-70 seq6 183 3e-41 >seq1 Length=275477322 Score = 621 bits (688), Expect = 4e-173 Identities = 711/953 (75%), Gaps = 12/953 (1%) Strand=Plus/Plus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||| ||||||||||| |||||||||||| ||| | | ||||||| | || | Sbjct 183993060 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 183993116 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 | || || ||||| || || |||||||| ||||| |||||||| | || |||||| | | Sbjct 183993117 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 183993176 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 |||| | || ||||| ||||| || || ||||||||| | |||||| ||| || | Sbjct 183993177 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 183993236 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | || | || || || || || |||||||| ||| || ||||||| ||||| || |||| Sbjct 183993237 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 183993296 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832 |||| |||| | || | || | |||||| | | || | ||| | | | | Sbjct 183993297 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 183993353 Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892 ||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| | Sbjct 183993354 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 183993413 Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952 | || || || | || || ||||| |||||| | |||||| | |||||||| || Sbjct 183993414 CAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 183993473 Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAG 163012 ||||||| | |||||| | || || ||||||||||| |||| ||| | || ||||| | Sbjct 183993474 TCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGG 183993533 Query 163013 CAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTG 163072 |||| ||||||||||| ||||| || || || ||| | || || || ||||||||||| | Sbjct 183993534 CAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCG 183993593 Query 163073 GTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTA 163132 |||| || || ||||||||||| ||||| | || || ||| | | ||||| ||||| | Sbjct 183993594 GTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCA 183993653 Query 163133 CTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACA 163192 |||| | ||||| || | ||||| || || || ||||||||||||||||| |||| Sbjct 183993654 CTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACA 183993713 Query 163193 TTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACT 163252 |||| ||||||||||| || |||||||| || |||||||| ||||| ||||||||||| Sbjct 183993714 TTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACT 183993773 Query 163253 CACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAA 163312 | ||||| | ||||||||| | ||||| | ||||| || | |||||||||||||| Sbjct 183993774 CTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTT 183993833 Query 163313 TGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTG 163372 | ||| | ||||||||||| ||||| || || ||||| |||||||||||||| |||| Sbjct 183993834 TAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTG 183993893 Query 163373 ACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTA 163432 | ||| || ||| ||||||||| |||||| | ||| | || ||||||| Sbjct 183993894 ATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTA 183993953 Query 163433 TGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 ||||||| |||||||| ||||||||||| |||||||| || || || |||||| Sbjct 183993954 TGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 183994006 Score = 206 bits (228), Expect = 3e-48 Identities = 334/478 (70%), Gaps = 12/478 (3%) Strand=Plus/Minus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||| ||||||||||| |||| ||||||| ||| | | ||||||| | || | Sbjct 150871632 TCGGGTGGTTCGGTGTTTTGACGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 150871576 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 | || | ||||| || || |||| ||| ||||| |||||||| | || | |||| | | Sbjct 150871575 TTATCACCTTCATCGCTGCTCCTCTAGTAGATATTGATGGTATTTGTGAGCTTGTTTCTG 150871516 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 |||| | || ||||| ||||| || || | ||||||| | |||||| ||| || | Sbjct 150871515 GTTCTTTACTTTATGGAAACAATATTATTTTTGGTGCTATTATTCCTACTTCTGCGGCGA 150871456 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | || | || || || || || |||||||| ||| || ||||||| ||||| || |||| Sbjct 150871455 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTATTGATGAATGGTTATACAATG 150871396 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832 |||| |||| | || | || |||||| | | || | ||| | | | | Sbjct 150871395 GTGGTCCTTATGAGCTAATTGTTCCACACTTCTTACTTGGTGT---AGCTTGTTATATGG 150871339 Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892 ||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| | Sbjct 150871338 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 150871279 Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952 | || | || || || |||| |||||| | |||||| | |||||||| || Sbjct 150871278 CAGCTGCTGTTGTAGCTGCTACTACTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 150871219 Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCA 163010 ||||| | | |||||| | || || ||||||||||| |||| ||| | || ||||| Sbjct 150871218 TCTCTAATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCA 150871161 >seq4 Length=191835039 Score = 609 bits (674), Expect = 3e-169 Identities = 703/944 (74%), Gaps = 12/944 (1%) Strand=Plus/Plus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||| ||||||||||| |||||||||||| ||| | | ||||||| | || | Sbjct 47963869 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 47963925 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 | || || ||||| || || |||||||| ||||| |||||||| | || |||||| | | Sbjct 47963926 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 47963985 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 |||| | || ||||| ||||| || || ||||||||| | |||||| ||| || | Sbjct 47963986 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 47964045 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | || | || || || || || |||||||| ||| || ||||||| ||||| || |||| Sbjct 47964046 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 47964105 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832 |||| |||| | || | || | |||||| | | || | ||| | | | | Sbjct 47964106 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 47964162 Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892 ||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| | Sbjct 47964163 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 47964222 Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952 | || || || | || || ||||| |||||| | |||||| | |||||||| || Sbjct 47964223 CAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 47964282 Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAG 163012 ||||||| | |||||| | || || ||||||||||| |||| ||| | || ||||| | Sbjct 47964283 TCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGG 47964342 Query 163013 CAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTG 163072 |||| ||||||||||| ||||| || || || ||| | || || || ||||||||||| | Sbjct 47964343 CAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCG 47964402 Query 163073 GTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTA 163132 |||| || || ||||||||||| ||||| | || || ||| | | ||||| ||||| | Sbjct 47964403 GTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCA 47964462 Query 163133 CTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACA 163192 |||| | ||||| || | ||||| || || || ||||||||||||||||| |||| Sbjct 47964463 CTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACA 47964522 Query 163193 TTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACT 163252 |||| ||||||||||| || |||||||| || |||||||| ||||| ||||||||||| Sbjct 47964523 TTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACT 47964582 Query 163253 CACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAA 163312 | ||||| | ||||||||| | ||||| | ||||| || | |||||||||||||| Sbjct 47964583 CTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTT 47964642 Query 163313 TGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTG 163372 | ||| | ||||||||||| ||||| || || ||||| |||||||||||||| |||| Sbjct 47964643 TAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTG 47964702 Query 163373 ACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTA 163432 | ||| || ||| ||||||||| |||||| | ||| | || ||||||| Sbjct 47964703 ATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTA 47964762 Query 163433 TGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 163476 ||||||| |||||||| ||||||||||| ||||||| || ||| Sbjct 47964763 TGGAAGTAATGCACGAACGTAATGCTCATAACTTCCTTCTAGAC 47964806 Score = 544 bits (602), Expect = 9e-150 Identities = 696/954 (73%), Gaps = 15/954 (2%) Strand=Plus/Minus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||| |||||| ||| |||||||||||| ||| | | ||| |||| | || | Sbjct 76202942 TCGGGTGGTTCAATGTTTTGATGATCCCTACCTTATTGACCGCA---ACTTCCGTATTTA 76202886 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 | || | ||||| || || |||||||| ||||| ||||||| | || ||||| | | Sbjct 76202885 TTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGTGAGCCTGT--CTG 76202828 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 |||| | || ||||| ||||| || || ||||||||| | |||||| ||| | || | Sbjct 76202827 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTACGGCAA 76202768 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | || | || || || || || ||||||| ||| || ||||||| ||||| || |||| Sbjct 76202767 TCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAATGGTTATACAATG 76202708 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832 | || |||| || || | || | |||||| | | || |||| | | | | Sbjct 76202707 GCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTG---CAGCTTGTTATATGG 76202651 Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892 ||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| | Sbjct 76202650 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATATT 76202591 Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952 | || | || | | || ||||| |||||| | ||||| | |||||||| || Sbjct 76202590 CAGCTCATGTTGCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATTGGTCAAGGAAGTT 76202531 Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTAC-ATGTTCGTGTTCCAA 163011 ||||||| | |||| | |||| || ||||||||||| |||| ||| | || || || Sbjct 76202530 TCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTATGATTGTATTTCAG 76202471 Query 163012 GCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGT 163071 | ||| ||||||||||| ||||| || || || ||| | || || || ||||||||||| Sbjct 76202470 GTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 76202411 Query 163072 GGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACT 163131 ||||| || || | ||||||||| ||||| | || || ||| | | ||||| ||||| Sbjct 76202410 GGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGCGAAACC 76202351 Query 163132 ACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAAC 163191 ||||| | ||||| || | ||||| || || || ||||| ||||||||||| ||| Sbjct 76202350 ACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAAGAGACTTATAAC 76202291 Query 163192 ATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAAC 163251 ||||| ||||||||||| || ||||||| || |||||||| ||||| |||||||||| Sbjct 76202290 ATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGCTAGTTTCAACAAC 76202231 Query 163252 TCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCA 163311 || ||||| | ||| ||||| | ||||| | ||||| | | |||||||||||||| Sbjct 76202230 TCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATCTGGTTCACTGCT 76202171 Query 163312 ATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTT 163371 | ||| | | ||||||||||||||| || || ||||| |||||||||||||| ||| Sbjct 76202170 TTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCCGTAGTT 76202111 Query 163372 GACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGT 163431 || ||| | || ||| ||||||||| ||||| | ||| | || |||||| Sbjct 76202110 GATAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAACCGTGCTAATCTTGGT 76202051 Query 163432 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 |||||||| |||||||| |||||||||||||||||||| || || || ||||| Sbjct 76202050 ATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAACTGCT 76201997 >seq17829 Length=1032 Score = 553 bits (612), Expect = 2e-152 Identities = 715/986 (73%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 ||||||||| | ||| ||| || || | || | || ||||| ||||| |||||| Sbjct 28 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 87 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| ||| | | ||| | || || || || || |||||||| || |||||| Sbjct 88 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCA 147 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || ||||| |||||||| | || |||||| | || || || || ||||| ||||| || Sbjct 148 GTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 207 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 || |||||||| | |||||| ||| ||||||||| | ||||| ||||| || ||| Sbjct 208 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATTGGTTTGCACTTTTATCCAATATGG 267 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801 ||||| ||| | ||||||| ||||| || ||||| || || | |||| | || | Sbjct 268 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGCGGTCCATATGAACTAATTGTTCTA 327 Query 162802 CACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTA 162861 |||||| | | || | | ||| |||||| ||||||||||| || || | Sbjct 328 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTG 387 Query 162862 GGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTG 162921 |||||||| |||||||| ||||||||| || || || || | || || ||||| Sbjct 388 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 447 Query 162922 TTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCT 162981 |||||| |||| || | |||||||| ||| || || | |||||||| || |||||| Sbjct 448 TTCTTGATCTACCCAATAGGTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAATTTCT 507 Query 162982 GGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTC 163041 |||||||| |||| ||| | || || || || ||||| || || || |||||||| || Sbjct 508 GGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTT 567 Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101 || ||| | || || || ||||||||||| || || || || ||||||||||||||||| Sbjct 568 CACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCC 627 Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161 | || |||||| | | ||||| ||||| || || | || || || | ||||| Sbjct 628 TTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 687 Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221 | ||||| ||||| ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 688 AGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 747 Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281 ||||||||||| ||||| ||||||||| || ||||| | || ||||| || ||||| Sbjct 748 TTGATCTTCCAATATGCGAGTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGCTGCT 807 Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341 | ||||| || | |||||||| || || | ||| | |||||||| ||||| | Sbjct 808 TGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTA 867 Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACT 163398 || |||||||| || ||||||||||| ||||| |||| || || ||| ||| Sbjct 868 AATGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGT---GTAATTAATACC 924 Query 163399 TGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCT 163458 ||||| ||||| ||||| | || |||||||||||||||||||| || ||||||||| Sbjct 925 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 984 Query 163459 CACAACTTCCCACTTGACCTTGCTGC 163484 || || ||||| || ||| | ||||| Sbjct 985 CATAATTTCCCTCTAGACTTAGCTGC 1010 >seq3 Length=300915289 Score = 280 bits (310), Expect = 2e-70 Identities = 302/399 (76%), Gaps = 3/399 (1%) Strand=Plus/Minus Query 163056 CGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTC 163115 ||| ||||||||||| ||||| || || ||||||||||| ||||| | || || ||| Sbjct 227134287 CGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAG 227134228 Query 163116 TCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGA 163175 | | ||||| ||||| ||||| | ||||| || | ||||| || || || ||||| Sbjct 227134227 TTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGA 227134168 Query 163176 AGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTA 163235 |||||||||||| |||||||| ||||||||||| || |||||| | || |||||||| || Sbjct 227134167 AGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATA 227134108 Query 163236 TGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTG 163295 ||| |||||||||||| ||||| | ||||||| | ||||| | ||||| || | Sbjct 227134107 TGCTAGTTTCAACAACTCTCGTTCTTTACACTTCT---TGGCTGCTTGGCCTGTCGTAGG 227134051 Query 163296 CATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTT 163355 |||||||||||| | | ||| | ||| ||||||||||||| || || ||||| || Sbjct 227134050 GATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTT 227133991 Query 163356 CAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAA 163415 |||||||||||| ||||| ||| | || ||| ||||||||| |||||| | || Sbjct 227133990 CAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATCAA 227133931 Query 163416 CAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAA 163454 | | || |||||||||||||| || |||| ||||| Sbjct 227133930 CCGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892 Score = 215 bits (238), Expect = 6e-51 Identities = 226/297 (76%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 163120 ATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAA 163179 ||||| ||||| ||||| | ||||| || | ||||| || || || || |||||| Sbjct 48259770 ATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAA 48259829 Query 163180 GAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCA 163239 |||||||| || ||||| |||||||| || || |||||||| || |||||||| ||||| Sbjct 48259830 GAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCT 48259889 Query 163240 TCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATC 163299 |||||||||||| ||||| | ||||||||| | ||||| | ||||| || | ||| Sbjct 48259890 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATC 48259949 Query 163300 TGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAAC 163359 ||||||||||| | ||| | ||||||||||||||||| || |||||||| |||||| Sbjct 48259950 TGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAAC 48260009 Query 163360 CAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAAC 163416 ||||| || ||||| ||| || ||| ||||||||| |||||| | ||| Sbjct 48260010 CAATCTGTAGTTGATAGTCAAGGTTGCGTTATTAATACTTGGGCTGATATCATCAAC 48260066 Score = 176 bits (194), Expect = 5e-39 Identities = 186/242 (77%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 162832 GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATAC 162891 |||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| Sbjct 228897969 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 228897910 Query 162892 TCTGCACCAGTATCTGCAGCA--TTC-GCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGT 162948 || || || || |||||| | | ||||| |||||| | |||||| | |||||||| Sbjct 228897909 TCAGCTCCTGT---TGCAGCTACTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGA 228897853 Query 162949 TCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTC 163008 ||||||||| | |||||| | || || ||||||||||| |||| ||| | || ||| Sbjct 228897852 AGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTC 228897793 Query 163009 CAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTC 163068 || ||||| ||||||||||| ||||| || || || ||| | || || || ||||||||| Sbjct 228897792 CAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTC 228897733 Query 163069 GG 163070 || Sbjct 228897732 GG 228897731 Score = 82.4 bits (90), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 163396 ACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAAT 163455 || ||||| |||||| | ||| | | | ||||||| |||||| |||||||| |||||| Sbjct 9135932 ACATGGGCTGATATCATCAACCGTGTAAT-CTTGGTACGGAAGTAATGCACGAACGTAAT 9135990 Query 163456 GCTCACAACTTCCCACTTGACCTTGCTGCT 163485 |||||||||||||| || || || |||||| Sbjct 9135991 GCTCACAACTTCCCTCTAGATCTAGCTGCT 9136020 >seq6 Length=240577051 Score = 183 bits (202), Expect = 3e-41 Identities = 257/358 (72%), Gaps = 12/358 (3%) Strand=Plus/Plus Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595 |||| ||||||||||| |||||||||||| ||| | | ||||||| | || | Sbjct 76928951 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 76929007 Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655 | || || ||||| || || |||||||| ||||| |||||||| | || |||||| | | Sbjct 76929008 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 76929067 Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715 |||| | || ||||| ||||| || || ||||||||| | |||||| ||| || | Sbjct 76929068 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 76929127 Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775 | || | || || || || || |||||||| ||| || ||||||| ||||| || |||| Sbjct 76929128 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 76929187 Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832 |||| |||| | || | || | |||||| | | || | ||| | | | | Sbjct 76929188 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 76929244 Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATA 162890 ||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| Sbjct 76929245 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATA 76929302 Score = 134 bits (148), Expect = 2e-26 Identities = 127/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 163324 ACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGT 163383 ||||||||||| ||||| || || ||||| |||||||||||||| ||||| ||| Sbjct 71012677 ACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGT 71012618 Query 163384 AAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATG 163443 || ||| ||||||||| |||||| | ||| | || |||||||||||||| ||| Sbjct 71012617 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATG 71012558 Query 163444 CACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 ||||| ||||||||||| |||||||| || || || |||||| Sbjct 71012557 CACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 71012516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552943839425160