Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq1 621 4e-173
seq4 609 3e-169
seq17829 553 2e-152
seq3 280 2e-70
seq6 183 3e-41
>seq1
Length=275477322
Score = 621 bits (688), Expect = 4e-173
Identities = 711/953 (75%), Gaps = 12/953 (1%)
Strand=Plus/Plus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595
|||| ||||||||||| |||||||||||| ||| | | ||||||| | || |
Sbjct 183993060 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 183993116
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
| || || ||||| || || |||||||| ||||| |||||||| | || |||||| | |
Sbjct 183993117 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 183993176
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
|||| | || ||||| ||||| || || ||||||||| | |||||| ||| || |
Sbjct 183993177 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 183993236
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| || | || || || || || |||||||| ||| || ||||||| ||||| || ||||
Sbjct 183993237 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 183993296
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832
|||| |||| | || | || | |||||| | | || | ||| | | | |
Sbjct 183993297 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 183993353
Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892
||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| |
Sbjct 183993354 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 183993413
Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952
| || || || | || || ||||| |||||| | |||||| | |||||||| ||
Sbjct 183993414 CAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 183993473
Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAG 163012
||||||| | |||||| | || || ||||||||||| |||| ||| | || ||||| |
Sbjct 183993474 TCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGG 183993533
Query 163013 CAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTG 163072
|||| ||||||||||| ||||| || || || ||| | || || || ||||||||||| |
Sbjct 183993534 CAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCG 183993593
Query 163073 GTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTA 163132
|||| || || ||||||||||| ||||| | || || ||| | | ||||| ||||| |
Sbjct 183993594 GTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCA 183993653
Query 163133 CTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACA 163192
|||| | ||||| || | ||||| || || || ||||||||||||||||| ||||
Sbjct 183993654 CTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACA 183993713
Query 163193 TTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACT 163252
|||| ||||||||||| || |||||||| || |||||||| ||||| |||||||||||
Sbjct 183993714 TTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACT 183993773
Query 163253 CACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAA 163312
| ||||| | ||||||||| | ||||| | ||||| || | ||||||||||||||
Sbjct 183993774 CTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTT 183993833
Query 163313 TGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTG 163372
| ||| | ||||||||||| ||||| || || ||||| |||||||||||||| ||||
Sbjct 183993834 TAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTG 183993893
Query 163373 ACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTA 163432
| ||| || ||| ||||||||| |||||| | ||| | || |||||||
Sbjct 183993894 ATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTA 183993953
Query 163433 TGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485
||||||| |||||||| ||||||||||| |||||||| || || || ||||||
Sbjct 183993954 TGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 183994006
Score = 206 bits (228), Expect = 3e-48
Identities = 334/478 (70%), Gaps = 12/478 (3%)
Strand=Plus/Minus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595
|||| ||||||||||| |||| ||||||| ||| | | ||||||| | || |
Sbjct 150871632 TCGGGTGGTTCGGTGTTTTGACGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 150871576
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
| || | ||||| || || |||| ||| ||||| |||||||| | || | |||| | |
Sbjct 150871575 TTATCACCTTCATCGCTGCTCCTCTAGTAGATATTGATGGTATTTGTGAGCTTGTTTCTG 150871516
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
|||| | || ||||| ||||| || || | ||||||| | |||||| ||| || |
Sbjct 150871515 GTTCTTTACTTTATGGAAACAATATTATTTTTGGTGCTATTATTCCTACTTCTGCGGCGA 150871456
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| || | || || || || || |||||||| ||| || ||||||| ||||| || ||||
Sbjct 150871455 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTATTGATGAATGGTTATACAATG 150871396
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832
|||| |||| | || | || |||||| | | || | ||| | | | |
Sbjct 150871395 GTGGTCCTTATGAGCTAATTGTTCCACACTTCTTACTTGGTGT---AGCTTGTTATATGG 150871339
Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892
||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| |
Sbjct 150871338 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 150871279
Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952
| || | || || || |||| |||||| | |||||| | |||||||| ||
Sbjct 150871278 CAGCTGCTGTTGTAGCTGCTACTACTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 150871219
Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCA 163010
||||| | | |||||| | || || ||||||||||| |||| ||| | || |||||
Sbjct 150871218 TCTCTAATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCA 150871161
>seq4
Length=191835039
Score = 609 bits (674), Expect = 3e-169
Identities = 703/944 (74%), Gaps = 12/944 (1%)
Strand=Plus/Plus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595
|||| ||||||||||| |||||||||||| ||| | | ||||||| | || |
Sbjct 47963869 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 47963925
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
| || || ||||| || || |||||||| ||||| |||||||| | || |||||| | |
Sbjct 47963926 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 47963985
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
|||| | || ||||| ||||| || || ||||||||| | |||||| ||| || |
Sbjct 47963986 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 47964045
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| || | || || || || || |||||||| ||| || ||||||| ||||| || ||||
Sbjct 47964046 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 47964105
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832
|||| |||| | || | || | |||||| | | || | ||| | | | |
Sbjct 47964106 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 47964162
Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892
||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| |
Sbjct 47964163 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATT 47964222
Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952
| || || || | || || ||||| |||||| | |||||| | |||||||| ||
Sbjct 47964223 CAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTT 47964282
Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAG 163012
||||||| | |||||| | || || ||||||||||| |||| ||| | || ||||| |
Sbjct 47964283 TCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGG 47964342
Query 163013 CAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTG 163072
|||| ||||||||||| ||||| || || || ||| | || || || ||||||||||| |
Sbjct 47964343 CAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCG 47964402
Query 163073 GTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTA 163132
|||| || || ||||||||||| ||||| | || || ||| | | ||||| ||||| |
Sbjct 47964403 GTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCA 47964462
Query 163133 CTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACA 163192
|||| | ||||| || | ||||| || || || ||||||||||||||||| ||||
Sbjct 47964463 CTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACA 47964522
Query 163193 TTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACT 163252
|||| ||||||||||| || |||||||| || |||||||| ||||| |||||||||||
Sbjct 47964523 TTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACT 47964582
Query 163253 CACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAA 163312
| ||||| | ||||||||| | ||||| | ||||| || | ||||||||||||||
Sbjct 47964583 CTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTT 47964642
Query 163313 TGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTG 163372
| ||| | ||||||||||| ||||| || || ||||| |||||||||||||| ||||
Sbjct 47964643 TAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTG 47964702
Query 163373 ACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTA 163432
| ||| || ||| ||||||||| |||||| | ||| | || |||||||
Sbjct 47964703 ATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTA 47964762
Query 163433 TGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 163476
||||||| |||||||| ||||||||||| ||||||| || |||
Sbjct 47964763 TGGAAGTAATGCACGAACGTAATGCTCATAACTTCCTTCTAGAC 47964806
Score = 544 bits (602), Expect = 9e-150
Identities = 696/954 (73%), Gaps = 15/954 (2%)
Strand=Plus/Minus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595
|||| |||||| ||| |||||||||||| ||| | | ||| |||| | || |
Sbjct 76202942 TCGGGTGGTTCAATGTTTTGATGATCCCTACCTTATTGACCGCA---ACTTCCGTATTTA 76202886
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
| || | ||||| || || |||||||| ||||| ||||||| | || ||||| | |
Sbjct 76202885 TTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGTGAGCCTGT--CTG 76202828
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
|||| | || ||||| ||||| || || ||||||||| | |||||| ||| | || |
Sbjct 76202827 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTACGGCAA 76202768
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| || | || || || || || ||||||| ||| || ||||||| ||||| || ||||
Sbjct 76202767 TCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAATGGTTATACAATG 76202708
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832
| || |||| || || | || | |||||| | | || |||| | | | |
Sbjct 76202707 GCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTG---CAGCTTGTTATATGG 76202651
Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACT 162892
||||| ||||||||||| || ||| | |||||||| |||||||| ||||||||| |
Sbjct 76202650 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATATT 76202591
Query 162893 CTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTT 162952
| || | || | | || ||||| |||||| | ||||| | |||||||| ||
Sbjct 76202590 CAGCTCATGTTGCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATTGGTCAAGGAAGTT 76202531
Query 162953 TCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTAC-ATGTTCGTGTTCCAA 163011
||||||| | |||| | |||| || ||||||||||| |||| ||| | || || ||
Sbjct 76202530 TCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTATGATTGTATTTCAG 76202471
Query 163012 GCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGT 163071
| ||| ||||||||||| ||||| || || || ||| | || || || |||||||||||
Sbjct 76202470 GTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 76202411
Query 163072 GGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACT 163131
||||| || || | ||||||||| ||||| | || || ||| | | ||||| |||||
Sbjct 76202410 GGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGCGAAACC 76202351
Query 163132 ACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAAC 163191
||||| | ||||| || | ||||| || || || ||||| ||||||||||| |||
Sbjct 76202350 ACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAAGAGACTTATAAC 76202291
Query 163192 ATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAAC 163251
||||| ||||||||||| || ||||||| || |||||||| ||||| ||||||||||
Sbjct 76202290 ATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGCTAGTTTCAACAAC 76202231
Query 163252 TCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCA 163311
|| ||||| | ||| ||||| | ||||| | ||||| | | ||||||||||||||
Sbjct 76202230 TCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATCTGGTTCACTGCT 76202171
Query 163312 ATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTT 163371
| ||| | | ||||||||||||||| || || ||||| |||||||||||||| |||
Sbjct 76202170 TTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCCGTAGTT 76202111
Query 163372 GACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGT 163431
|| ||| | || ||| ||||||||| ||||| | ||| | || ||||||
Sbjct 76202110 GATAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAACCGTGCTAATCTTGGT 76202051
Query 163432 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485
|||||||| |||||||| |||||||||||||||||||| || || || |||||
Sbjct 76202050 ATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCTAACTGCT 76201997
>seq17829
Length=1032
Score = 553 bits (612), Expect = 2e-152
Identities = 715/986 (73%), Gaps = 6/986 (1%)
Strand=Plus/Plus
Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561
||||||||| | ||| ||| || || | || | || ||||| ||||| ||||||
Sbjct 28 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 87
Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621
|||||| ||| | | ||| | || || || || || |||||||| || ||||||
Sbjct 88 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCA 147
Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681
|| ||||| |||||||| | || |||||| | || || || || ||||| ||||| ||
Sbjct 148 GTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 207
Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741
|| |||||||| | |||||| ||| ||||||||| | ||||| ||||| || |||
Sbjct 208 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATTGGTTTGCACTTTTATCCAATATGG 267
Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801
||||| ||| | ||||||| ||||| || ||||| || || | |||| | || |
Sbjct 268 GAAGCTGCATCCGTTGATGAATGGTTATACAATGGCGGTCCATATGAACTAATTGTTCTA 327
Query 162802 CACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTA 162861
|||||| | | || | | ||| |||||| ||||||||||| || || |
Sbjct 328 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTG 387
Query 162862 GGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTG 162921
|||||||| |||||||| ||||||||| || || || || | || || |||||
Sbjct 388 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 447
Query 162922 TTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCT 162981
|||||| |||| || | |||||||| ||| || || | |||||||| || ||||||
Sbjct 448 TTCTTGATCTACCCAATAGGTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAATTTCT 507
Query 162982 GGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTC 163041
|||||||| |||| ||| | || || || || ||||| || || || |||||||| ||
Sbjct 508 GGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTT 567
Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101
|| ||| | || || || ||||||||||| || || || || |||||||||||||||||
Sbjct 568 CACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCC 627
Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161
| || |||||| | | ||||| ||||| || || | || || || | |||||
Sbjct 628 TTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 687
Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221
| ||||| ||||| ||||| || || || ||||| ||||||||||| || ||||| ||
Sbjct 688 AGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 747
Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281
||||||||||| ||||| ||||||||| || ||||| | || ||||| || |||||
Sbjct 748 TTGATCTTCCAATATGCGAGTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGCTGCT 807
Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341
| ||||| || | |||||||| || || | ||| | |||||||| ||||| |
Sbjct 808 TGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTA 867
Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACT 163398
|| |||||||| || ||||||||||| ||||| |||| || || ||| |||
Sbjct 868 AATGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGT---GTAATTAATACC 924
Query 163399 TGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCT 163458
||||| ||||| ||||| | || |||||||||||||||||||| || |||||||||
Sbjct 925 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 984
Query 163459 CACAACTTCCCACTTGACCTTGCTGC 163484
|| || ||||| || ||| | |||||
Sbjct 985 CATAATTTCCCTCTAGACTTAGCTGC 1010
>seq3
Length=300915289
Score = 280 bits (310), Expect = 2e-70
Identities = 302/399 (76%), Gaps = 3/399 (1%)
Strand=Plus/Minus
Query 163056 CGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTC 163115
||| ||||||||||| ||||| || || ||||||||||| ||||| | || || |||
Sbjct 227134287 CGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAG 227134228
Query 163116 TCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGA 163175
| | ||||| ||||| ||||| | ||||| || | ||||| || || || |||||
Sbjct 227134227 TTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGA 227134168
Query 163176 AGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTA 163235
|||||||||||| |||||||| ||||||||||| || |||||| | || |||||||| ||
Sbjct 227134167 AGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATA 227134108
Query 163236 TGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTG 163295
||| |||||||||||| ||||| | ||||||| | ||||| | ||||| || |
Sbjct 227134107 TGCTAGTTTCAACAACTCTCGTTCTTTACACTTCT---TGGCTGCTTGGCCTGTCGTAGG 227134051
Query 163296 CATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTT 163355
|||||||||||| | | ||| | ||| ||||||||||||| || || ||||| ||
Sbjct 227134050 GATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTT 227133991
Query 163356 CAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAA 163415
|||||||||||| ||||| ||| | || ||| ||||||||| |||||| | ||
Sbjct 227133990 CAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATCAA 227133931
Query 163416 CAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAA 163454
| | || |||||||||||||| || |||| |||||
Sbjct 227133930 CCGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892
Score = 215 bits (238), Expect = 6e-51
Identities = 226/297 (76%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 163120 ATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAA 163179
||||| ||||| ||||| | ||||| || | ||||| || || || || ||||||
Sbjct 48259770 ATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAA 48259829
Query 163180 GAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCA 163239
|||||||| || ||||| |||||||| || || |||||||| || |||||||| |||||
Sbjct 48259830 GAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCT 48259889
Query 163240 TCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATC 163299
|||||||||||| ||||| | ||||||||| | ||||| | ||||| || | |||
Sbjct 48259890 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATC 48259949
Query 163300 TGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAAC 163359
||||||||||| | ||| | ||||||||||||||||| || |||||||| ||||||
Sbjct 48259950 TGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAAC 48260009
Query 163360 CAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAAC 163416
||||| || ||||| ||| || ||| ||||||||| |||||| | |||
Sbjct 48260010 CAATCTGTAGTTGATAGTCAAGGTTGCGTTATTAATACTTGGGCTGATATCATCAAC 48260066
Score = 176 bits (194), Expect = 5e-39
Identities = 186/242 (77%), Gaps = 6/242 (2%)
Strand=Plus/Minus
Query 162832 GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATAC 162891
|||||| ||||||||||| || ||| | |||||||| |||||||| |||||||||
Sbjct 228897969 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 228897910
Query 162892 TCTGCACCAGTATCTGCAGCA--TTC-GCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGT 162948
|| || || || |||||| | | ||||| |||||| | |||||| | ||||||||
Sbjct 228897909 TCAGCTCCTGT---TGCAGCTACTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGA 228897853
Query 162949 TCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTC 163008
||||||||| | |||||| | || || ||||||||||| |||| ||| | || |||
Sbjct 228897852 AGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTC 228897793
Query 163009 CAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTC 163068
|| ||||| ||||||||||| ||||| || || || ||| | || || || |||||||||
Sbjct 228897792 CAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTC 228897733
Query 163069 GG 163070
||
Sbjct 228897732 GG 228897731
Score = 82.4 bits (90), Expect = 8e-11
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 163396 ACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAAT 163455
|| ||||| |||||| | ||| | | | ||||||| |||||| |||||||| ||||||
Sbjct 9135932 ACATGGGCTGATATCATCAACCGTGTAAT-CTTGGTACGGAAGTAATGCACGAACGTAAT 9135990
Query 163456 GCTCACAACTTCCCACTTGACCTTGCTGCT 163485
|||||||||||||| || || || ||||||
Sbjct 9135991 GCTCACAACTTCCCTCTAGATCTAGCTGCT 9136020
>seq6
Length=240577051
Score = 183 bits (202), Expect = 3e-41
Identities = 257/358 (72%), Gaps = 12/358 (3%)
Strand=Plus/Plus
Query 162539 TCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGC---TTCA 162595
|||| ||||||||||| |||||||||||| ||| | | ||||||| | || |
Sbjct 76928951 TCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATT---GACCGCAACTTCCGTATTTA 76929007
Query 162596 TCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAG 162655
| || || ||||| || || |||||||| ||||| |||||||| | || |||||| | |
Sbjct 76929008 TTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTG 76929067
Query 162656 GTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTA 162715
|||| | || ||||| ||||| || || ||||||||| | |||||| ||| || |
Sbjct 76929068 GTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGA 76929127
Query 162716 TTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATG 162775
| || | || || || || || |||||||| ||| || ||||||| ||||| || ||||
Sbjct 76929128 TCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATG 76929187
Query 162776 GTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---G 162832
|||| |||| | || | || | |||||| | | || | ||| | | | |
Sbjct 76929188 GTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGTTATATGG 76929244
Query 162833 GTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATA 162890
||||| ||||||||||| || ||| | |||||||| |||||||| |||||||||
Sbjct 76929245 GTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATA 76929302
Score = 134 bits (148), Expect = 2e-26
Identities = 127/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 163324 ACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGT 163383
||||||||||| ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct 71012677 ACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGT 71012618
Query 163384 AAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATG 163443
|| ||| ||||||||| |||||| | ||| | || |||||||||||||| |||
Sbjct 71012617 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATG 71012558
Query 163444 CACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485
||||| ||||||||||| |||||||| || || || ||||||
Sbjct 71012557 CACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 71012516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552943839425160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |