Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq1 594 2e-165 seq4 587 2e-163 seq17829 560 3e-155 seq6 221 4e-53 seq3 203 1e-47 seq7 82.4 2e-11 seq5428 80.6 8e-11 >seq1 Length=275477322 Score = 594 bits (658), Expect = 2e-165 Identities = 715/962 (74%), Gaps = 10/962 (1%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||||| |||||||||||||||||||| |||||||| ||||| | ||||| || Sbjct 183994003 AGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATT 183993944 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||||| | |||||||| ||| | || | ||| | | || | ||| Sbjct 183993943 AGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGA 183993884 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||||||||| || ||||| |||||||| || || | || || | Sbjct 183993883 TTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAA 183993824 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | ||| |||||||||||||||||||| |||| | | ||||| || Sbjct 183993823 CCAGATCCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAA 183993764 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 183993763 ACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGT 183993704 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 |||||||||||| |||||||| || || | || ||||||| ||||| ||||| || Sbjct 183993703 CTCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCT 183993644 Query 18194 AAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250 || || | |||| || |||| || ||||||||| ||||| | || ||||| Sbjct 183993643 GATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAA 183993587 Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||| || || ||||| | ||| || || |||||||||||||| |||||||| || ||||| Sbjct 183993586 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAA 183993527 Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370 ||| | ||| || ||||||||||| || || | ||||||||||||||||||||| || Sbjct 183993526 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 183993467 Query 18371 TTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAA 18428 ||| |||| |||||||| | ||||| || | || || ||||||| || || || ||||| Sbjct 183993466 TTGACCAATAGGATAAATCAAGAAA-ACAGCAGTAG-CAGCTGCAACAGGAGCTGAATAT 183993409 Query 18429 GCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATG 18488 |||||| |||||| ||||||||||| || | ||||||||||||| | || ||||| Sbjct 183993408 GCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATA 183993349 Query 18489 TAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 18548 ||| || | || | | ||||| | ||||| || | ||| || || || || ||| Sbjct 183993348 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTAT 183993289 Query 18549 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTA 18608 ||||| || || | | |||||||||||| |||||||| || || | ||||| || | Sbjct 183993288 AACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCA 183993229 Query 18609 GATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACA 18668 || | || | || || || || || || ||||||||||| ||||| | || || ||| Sbjct 183993228 GAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACA 183993169 Query 18669 GGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCT 18728 ||||||||||||||||| || || || ||||||||||| | || || || | |||| | Sbjct 183993168 GGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACG 183993109 Query 18729 GTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGG 18788 | || |||||| || | | ||||||||| | || || |||||||| | ||| || ||| Sbjct 183993108 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGG 183993049 Query 18789 TT 18790 || Sbjct 183993048 TT 183993047 Score = 259 bits (286), Expect = 1e-64 Identities = 356/489 (73%), Gaps = 8/489 (2%) Strand=Plus/Plus Query 18306 TGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAA 18365 |||||||| | ||| || ||||||||||| || || | ||||||||||| ||||||| Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220 Query 18366 CTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGG 18423 || ||||| |||| |||||||| | ||||| || | || | |||||| | || | || | Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAA-ACAGTAGTA-GCAGCTACAACAGCAGCTG 150871278 Query 18424 AATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTC 18483 |||| |||||| |||||| ||||||||||| || | ||||||||||||| | || | Sbjct 150871279 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 150871338 Query 18484 CCATGTAAGCTGCGATGCCGA-TGAGAA-AGTGGAACACAATGAGTTGATATGGTCCTCC 18541 |||| ||| || | || | | |||| ||||| ||||| || | ||| || || || Sbjct 150871339 CCATATAACAAGCTACACCAAGTAAGAAGTGTGGA--ACAATTAGCTCATAAGGACCACC 150871396 Query 18542 GTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGAT 18601 || |||||||| || || | | |||||||||||| |||||||| || || | ||||| Sbjct 150871397 ATTGTATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGAT 150871456 Query 18602 TGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCC 18661 || ||| | || | || || || | || || ||||||||||| ||||| | || Sbjct 150871457 CGCCGCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACC 150871516 Query 18662 TGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAA 18721 || ||| |||||| ||||||||| || || || |||||||||| | || | || | Sbjct 150871517 AGAAACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAAGGTGATAAT 150871576 Query 18722 AAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTA 18781 |||| | | || |||||| || | | ||||||| | | || || |||||||| | ||| Sbjct 150871577 AAATACGGAAGTTGCGGTCAATAAGGTAGGGATCGTCAAAACACCGAACCACCCGATGTA 150871636 Query 18782 GAGGCGGTT 18790 || |||| Sbjct 150871637 AAGATGGTT 150871645 Score = 100 bits (110), Expect = 9e-17 Identities = 149/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 18579 ATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC--GGGACGATTGCCCCTGATATGA 18636 |||||||| || || || || |||| |||| || || | || || || || || | Sbjct 21980745 ATTGGGTAAAAATGCAGTTCGGTTGCCGTAGAA-ACTAGGAATAATAGCACCAGAAATAA 21980803 Query 18637 TGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGG 18696 | ||||||||| ||||| | || || | |||||||||||||||||| | || || | Sbjct 21980804 TA--GTTTCCATAAAGTAAAGAGCCAGAAATAGGCTCACGAATACCATCAACATCTACTG 21980861 Query 18697 GAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCA 18756 ||||||||||||| || || | | |||| | | || |||||| || | | |||||||| Sbjct 21980862 GAGGAGCAGCAACGAAGGCGGTAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCA 21980921 Query 18757 TAAGTACCCCAAACCACCCCACGTAGAG 18784 | | | | |||||||| | |||||| Sbjct 21980922 TCAAAATAACGAACCACCCGATGTAGAG 21980949 >seq4 Length=191835039 Score = 587 bits (650), Expect = 2e-163 Identities = 721/975 (74%), Gaps = 10/975 (1%) Strand=Plus/Minus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 ||||| ||||||||||||||||||| |||||||| ||||| | ||||| ||||| | | Sbjct 47964805 TCTAGAAGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGG 47964746 Query 17901 TTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTG 17960 |||| | |||||||| ||| | || | ||| | | || | |||||||||| Sbjct 47964745 TTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTTG 47964686 Query 17961 AAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATG 18020 || ||||||||||| || ||||| |||||||| || || | || || | ||| || Sbjct 47964685 AAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGATC 47964626 Query 18021 CAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCA 18080 | ||| |||||||||||||||||||| |||| | | ||||| || |||||| Sbjct 47964625 CCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCA 47964566 Query 18081 TACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCT 18140 || |||||||| | || ||||| || |||||||| || ||||| ||||| ||||||||| Sbjct 47964565 TATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCT 47964506 Query 18141 TCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAAT--AA 18198 ||||| |||||||| || || | || ||||||| ||||| ||||| || || || Sbjct 47964505 TCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAA 47964446 Query 18199 GT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCT 18257 | |||| || |||| || ||||||||| ||||| | || |||||||| || Sbjct 47964445 CTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAATACACCA 47964389 Query 18258 GCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAAC 18317 || ||||| | ||| || || |||||||||||||| |||||||| || |||||||| | | Sbjct 47964388 GCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAATC 47964329 Query 18318 ATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCA 18377 || || ||||||||||| || || | ||||||||||||||||||||| ||||| ||| Sbjct 47964328 ATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCA 47964269 Query 18378 AAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACAC 18435 | |||||||| | ||||| || | || || ||||||| || || || ||||| |||||| Sbjct 47964268 ATAGGATAAATCAAGAAA-ACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATGCAACAG 47964211 Query 18436 AAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTG 18495 |||||| ||||||||||| || | ||||||||||||| | || ||||| ||| | Sbjct 47964210 CAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAG 47964151 Query 18496 CGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACT 18555 | | || | | ||||| | ||||| || | ||| || || || || |||||||| | Sbjct 47964150 CTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATT 47964091 Query 18556 CGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACG 18615 | || | | |||||||||||| |||||||| || || | ||||| || ||| | | Sbjct 47964090 CATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAG 47964031 Query 18616 GGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCAC 18675 | | || || || || || || ||||||||||| ||||| | || || |||||||||| Sbjct 47964030 GAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCAC 47963971 Query 18676 GAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTG 18735 |||||||||| || || || ||||||||||| | || || || | |||| | | || || Sbjct 47963970 GAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTG 47963911 Query 18736 CGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTG 18795 |||| || | | ||||||||| | || || |||||||| | ||| || ||||| | | Sbjct 47963910 CGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGG 47963851 Query 18796 TACTCGTAACCCAGT 18810 | || || | ||||| Sbjct 47963850 TGCTAGTTATCCAGT 47963836 Score = 529 bits (586), Expect = 5e-146 Identities = 705/966 (73%), Gaps = 19/966 (2%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 || || |||||| |||||||| ||||||||||| |||||||| ||||| | ||||| || Sbjct 76202000 AGTTAGATCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATT 76202059 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||||| | | |||||| ||| | || || ||| | | || | ||| Sbjct 76202060 AGCACGGTTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTACGGA 76202119 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||||||||| || || || |||||| | || || | || || | Sbjct 76202120 TTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGTGAA 76202179 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | |||| ||||||||||||||||||| |||| | | ||||| || Sbjct 76202180 CCAGATCCCTATGACAGGCCAAGCAGCCAAGAAGATGTGTAAAGAACGAGAGTTGTTGAA 76202239 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | | ||||| || |||||||| || ||||| ||||| || Sbjct 76202240 ACTAGCATATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATAAGT 76202299 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 |||||| ||||| |||||||| || || | || ||||||| ||||| ||||| || Sbjct 76202300 CTCTTCATCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCGCT 76202359 Query 18194 AAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250 || || | |||| || |||| || ||||||||| ||||| | || ||||| Sbjct 76202360 GATCAAACTAGAGG--TTACCAAG-GAACCATGCATAGCATTGAATAGGGAACCGCCGAA 76202416 Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||| || || ||||| | ||| || || |||||||||||||| |||||||| | || || Sbjct 76202417 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAA 76202476 Query 18311 TACGAACATGAAA-TTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCC 18369 ||| | ||| ||| ||||||||||| || |||| | ||||||||||||||||||| | Sbjct 76202477 TACAATCATAAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTC 76202536 Query 18370 CTTGTCCAAAAGGAT-AAACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATA 18427 |||| |||| ||||| || | ||||| || | || | ||| |||| || | || ||||| Sbjct 76202537 CTTGACCAATAGGATGAATCAAGAAA-ACAGCAGTA-GCAACTGCAACATGAGCTGAATA 76202594 Query 18428 AGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAT 18487 |||||| |||||| ||||||||||| || | ||||||||||||| | || ||||| Sbjct 76202595 TGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 76202654 Query 18488 GT---AAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 18544 | ||||||| || | | ||||| | ||||| || ||||| || || || || Sbjct 76202655 ATAACAAGCTGC---ACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATT 76202711 Query 18545 ATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 18604 |||||||| || || | | |||| ||||||| |||||||| || || | |||||||| Sbjct 76202712 GTATAACCATTCATCAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGC 76202771 Query 18605 GTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGA 18664 |||| | || | || || || || || || ||||||||||| ||||| | || | Sbjct 76202772 CGTAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACC--A 76202829 Query 18665 GACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAA 18724 |||||||||||||||||||| || || || ||||||||||| | || | || | ||| Sbjct 76202830 GACAGGCTCACGAATACCATAAATATCTACTGGAGGAGCAGCGATGAAGGTGATAATAAA 76202889 Query 18725 TGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAG 18784 | | | || |||||| || | | ||||||||| | || |||||||| | ||| || Sbjct 76202890 TACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACATTGAACCACCCGATGTAAAG 76202949 Query 18785 GCGGTT 18790 ||||| Sbjct 76202950 ACGGTT 76202955 >seq17829 Length=1032 Score = 560 bits (620), Expect = 3e-155 Identities = 719/986 (73%), Gaps = 4/986 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 |||||| ||||| ||||| |||||||||||||| || ||||||||||| | |||||||| Sbjct 1008 AGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 949 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||| | | |||||||| ||| | || | ||| | | || | ||| Sbjct 948 AGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGA 889 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 |||||| || ||||| ||||| | ||| |||||||||||| ||| || | | ||||| Sbjct 888 TTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 829 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | |||||||||| | | |||||| || Sbjct 828 CCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTGAA 769 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 || ||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 768 ACTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 709 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||| ||||| || ||| | || || | || ||| ||| || || ||||| || Sbjct 708 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 649 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 || | ||||| || | |||||||||||| ||||| | || |||||||| Sbjct 648 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATAC 589 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || || ||||| | ||| || || || |||||||| ||||| || || || || ||||| Sbjct 588 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATAC 529 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 | ||| || ||||||||||| ||| || |||||||||||||| || ||||| ||||| Sbjct 528 AATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCTTG 469 Query 18374 TCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 || | || || | | ||||| || | || || ||||||| || || || ||||| ||| Sbjct 468 ACCTATTGGGTAGATCAAGAAA-ACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATGCA 411 Query 18432 ACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAA 18491 ||| |||||| ||||||||||| || | | ||||||||||||| | || ||||||||| Sbjct 410 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 351 Query 18492 GCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 18551 || | || | | ||||| | ||||| |||| |||||| || || || |||||| Sbjct 350 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAAC 291 Query 18552 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 18611 || || || | || |||||||||||| ||||| || ||||| | ||| || || ||| Sbjct 290 CATTCATCAACGGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCAGAA 231 Query 18612 GACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGC 18671 | || | || || || || || || ||||||||||| |||| | ||| || |||||| Sbjct 230 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGC 171 Query 18672 TCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTA 18731 |||||||||||||| || || || ||||| ||||||| || || || | |||| | | | Sbjct 170 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAA 111 Query 18732 GCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTG 18791 | |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 110 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 51 Query 18792 TTTGTACTCGTAACCCAGTCACATAA 18817 | || || || | ||||| ||| || Sbjct 50 TCAGTGCTGGTTATCCAGTTACAGAA 25 >seq6 Length=240577051 Score = 221 bits (244), Expect = 4e-53 Identities = 281/387 (73%), Gaps = 0/387 (0%) Strand=Plus/Minus Query 18424 AATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTC 18483 |||| |||||| |||||| ||||||||||| || | ||||||||||||| | || | Sbjct 76929304 AATATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 76929245 Query 18484 CCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGT 18543 |||| ||| || | || | | ||||| | ||||| || | ||| || || || | Sbjct 76929244 CCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCAT 76929185 Query 18544 TATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTG 18603 | |||||||| || || | | |||||||||||| |||||||| || || | ||||| | Sbjct 76929184 TGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCG 76929125 Query 18604 CGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTG 18663 | ||| | || | || || || || || || ||||||||||| ||||| | || | Sbjct 76929124 CCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAG 76929065 Query 18664 AGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAA 18723 | |||||||||||||||||||| || || || ||||||||||| | || || || | || Sbjct 76929064 AAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAA 76929005 Query 18724 ATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGA 18783 || | | || |||||| || | | ||||||||| | || || |||||||| | ||| | Sbjct 76929004 ATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAA 76928945 Query 18784 GGCGGTTGTTTGTACTCGTAACCCAGT 18810 | ||||| | || || || | ||||| Sbjct 76928944 GACGGTTTTCAGTGCTAGTTATCCAGT 76928918 Score = 125 bits (138), Expect = 2e-24 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||||| |||||||||||||||||||| |||||||| ||||| | ||||| || Sbjct 71012519 AGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATT 71012578 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||||| | |||||||| ||| | || | ||| | | || | ||| Sbjct 71012579 AGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGA 71012638 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGT 17992 ||||||||| ||||||||||| || ||||| |||||||| Sbjct 71012639 TTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGT 71012677 >seq3 Length=300915289 Score = 203 bits (224), Expect = 1e-47 Identities = 197/248 (79%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 18246 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCT 18305 |||||||| || || ||||| | ||| || || |||||||||||||| |||||||| || Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790 Query 18306 TGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAA 18365 |||||||| | ||| || ||||||||||| || || | ||||||||||||||||||| Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850 Query 18366 CTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGG 18423 || ||||| |||| |||||||| | ||||| || | || | | |||||| || || || | Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAA-ACAGCAGTA-GTAGCTGCAACAGGAGCTG 228897908 Query 18424 AATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTC 18483 |||| |||||| |||||| ||||||||||| || | ||||||||||||| | || | Sbjct 228897909 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 228897968 Query 18484 CCATGTAA 18491 |||| ||| Sbjct 228897969 CCATATAA 228897976 Score = 181 bits (200), Expect = 3e-41 Identities = 284/401 (71%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 17862 TTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTGTTGAGTACGTCAGCCCATGTA 17921 ||||| |||| || ||||| | ||||| ||||| | ||||| | |||||||| ||| Sbjct 227133892 TTACGTCCGTGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTA 227133951 Query 17922 GGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTGAAGTTGAATCCATTGAGATTA 17981 | || || ||| | | || | |||||||||||| ||||||||||| || || Sbjct 227133952 TTAATAACGTGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTG 227134011 Query 17982 AAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCC 18041 || |||| ||| || || | || || | ||| || | ||| |||||||||||| Sbjct 227134012 AATGCCACAGTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCC 227134071 Query 18042 AAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 18101 |||||| |||| | | ||||| || |||||||| |||||||| | || ||| Sbjct 227134072 AAGAAG---TGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCAACCA 227134128 Query 18102 AAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCA 18161 || || |||||||| || ||||| ||||| |||||||||||||| |||||||| || || Sbjct 227134129 AAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCT 227134188 Query 18162 TAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAAT--AAGT-GAGGAAGTAACAAGACTT 18218 | || ||||||| ||||| ||||| || || || | |||| || |||| Sbjct 227134189 TCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGG--TTACCAAG-GAA 227134245 Query 18219 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGC 18259 || ||||||||| ||||| | || |||||||| || || Sbjct 227134246 CCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGC 227134286 Score = 154 bits (170), Expect = 4e-33 Identities = 181/245 (74%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 17952 GATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 18011 ||||||||||| ||||| ||||| || || || |||||||| || || | || || Sbjct 48260014 GATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTG 48259955 Query 18012 AGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTA 18071 | ||| || | || |||||||||||||||||||| |||| | | ||||| Sbjct 48259954 AACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTG 48259895 Query 18072 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATAC 18131 || |||||||| |||||||| | || ||||| || || ||||| || ||||||||||| Sbjct 48259894 AAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATATTATAA 48259835 Query 18132 GTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCT 18191 ||||||||||| || |||||||| || || | || ||||||| ||||| ||||| Sbjct 48259834 GTCTCTTCTTCCTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCC 48259775 Query 18192 CTAAT 18196 || || Sbjct 48259774 CTGAT 48259770 >seq7 Length=154015841 Score = 82.4 bits (90), Expect = 2e-11 Identities = 80/98 (82%), Gaps = 4/98 (4%) Strand=Plus/Plus Query 18339 ATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATAC 18397 || || | ||||||||||||||||||||| ||||| |||| |||||||| | ||||| || Sbjct 19025411 ATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGATAAATCAAGAAA-AC 19025469 Query 18398 TG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACA 18434 | || | |||||||| || || || ||||| |||||| Sbjct 19025470 AGCAGTA-GCAGCTGCAACAGGAGCTGAATATGCAACA 19025506 >seq5428 Length=272540 Score = 80.6 bits (88), Expect = 8e-11 Identities = 90/115 (78%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 18303 GCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAG 18362 || |||||||| | ||| || ||||||||||| || || | ||||| ||||||||| Sbjct 118629 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCACGCCATCAGAG 118570 Query 18363 AAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTAC 18415 ||||| ||||| |||| |||||||| | ||||| || | || | |||||||| || Sbjct 118569 AAACTTCCTTGACCAATAGGATAAATCAAGAAA-ACAGCAGTA-GCAGCTGCAAC 118517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151281762883566