Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq4 560 1e-154
seq1 560 1e-154
seq17829 515 5e-141
seq3 235 7e-57
seq6 172 7e-38
>seq4
Length=191835039
Score = 560 bits (620), Expect = 1e-154
Identities = 713/979 (73%), Gaps = 2/979 (0%)
Strand=Plus/Minus
Query 7896 GTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTGCTCT 7955
||||| ||||||| || ||||| | ||| ||||| ||||||||||| | || || |
Sbjct 47964806 GTCTAGAAGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACG 47964747
Query 7956 GTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGATTGGTT 8015
||| | | ||| |||| ||| ||| | ||| | | |||||| || ||||||||
Sbjct 47964746 GTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTT 47964687
Query 8016 AAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAAC 8075
|| || ||||| || |||||||||||||| || | |||||| | || ||| ||||| |
Sbjct 47964686 GAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGAT 47964627
Query 8076 ACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATG 8134
| ||| || || | | ||| | ||||||||| | | | | |||||| |||| | |
Sbjct 47964626 CCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTA-G 47964568
Query 8135 CATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTT 8194
|||| ||||||||||||| |||||| || ||||||||||| ||||| ||||| |||||||
Sbjct 47964567 CATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTT 47964508
Query 8195 CTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTA 8254
||||||||||||| || ||||| | || |||||| | |||||| || || ||||| |
Sbjct 47964507 CTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCA 47964448
Query 8255 GAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTG 8314
| ||| || || || ||||| |||||||||||||| || || || ||||| | ||| |
Sbjct 47964447 AACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAG 47964388
Query 8315 CTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACA 8374
|||| ||| ||| || || ||||||||||| ||||| || ||||| |||||||| | ||
Sbjct 47964387 CTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAATCA 47964328
Query 8375 TGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAA 8434
| ||||| || |||||||| || |||| |||||| ||||||||||| || |||||||
Sbjct 47964327 TAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAA 47964268
Query 8435 ATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGA 8494
||||| | ||||| || || |||||| | || ||||| |||||| ||| |
Sbjct 47964267 TAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAA 47964208
Query 8495 TCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAA 8554
|||| || | |||||| | ||| | | ||||||| | |||||| ||| || |
Sbjct 47964207 TCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTA 47964148
Query 8555 TTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCACTCAT 8614
|||| | |||||| | | || | || ||| ||||| || || || ||||| ||||
Sbjct 47964147 CACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCAT 47964088
Query 8615 CTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAA 8674
| | | |||||||||||||| || || || || ||||| || || |||| ||||
Sbjct 47964087 CAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAGGAA 47964028
Query 8675 CGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAA 8734
| ||||||||| || || ||||||||||| | || ||||| | |||||| |||||||
Sbjct 47964027 TAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAA 47963968
Query 8735 TACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAG 8794
|||| || ||||| || || |||||||| || || || | ||||| | || || |
Sbjct 47963967 TACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGCGG 47963908
Query 8795 CTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTTGTAC 8854
|| ||| ||| ||||| | ||| || ||||| |||| ||||| | ||| | || |
Sbjct 47963907 TCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGGTGC 47963848
Query 8855 TTGTAACCCACTCGCAAAA 8873
| || | ||| | ||| ||
Sbjct 47963847 TAGTTATCCAGTTGCAGAA 47963829
Score = 468 bits (518), Expect = 6e-127
Identities = 678/952 (71%), Gaps = 5/952 (1%)
Strand=Plus/Plus
Query 7897 TCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTGCTCTG 7956
|||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || || | |
Sbjct 76202007 TCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGG 76202066
Query 7957 TTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGATTGGTTA 8016
|| | | | | |||| ||| ||| | | ||| | | |||||| || ||||||||
Sbjct 76202067 TTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTACGGATTGGTTG 76202126
Query 8017 AAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACA 8076
|| || ||||| || ||||| |||||||| | | |||||| | || ||| ||||| |
Sbjct 76202127 AAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGTGAACCAGATC 76202186
Query 8077 CATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAACGATGC 8135
| || || || | | ||| | ||||| ||| | | | | |||||| |||| | ||
Sbjct 76202187 CCTATGACAGGCCAAGCAGCCAAGAAGATGTGTAAAGAACGAGAGTTGTTGAAACTA-GC 76202245
Query 8136 ATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTC 8195
||| |||||||||||| |||||| || ||||||||||| ||||| ||||| ||||||||
Sbjct 76202246 ATATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTC 76202305
Query 8196 TTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAG 8255
||||||||||| || ||||| | || |||||| | |||||| || || ||||| |
Sbjct 76202306 ATCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCGCTGATCAA 76202365
Query 8256 AGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGC 8315
| ||| || || || ||||| ||||||||| |||| || || || ||||| | ||| ||
Sbjct 76202366 ACTAGAGGTTACCAAGGAACCATGCATAGCATTGAATAGGGAACCGCCGAATACACCAGC 76202425
Query 8316 TACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACAT 8375
||| ||| ||| || || ||||||||||| ||||| || ||| | || ||||| | |||
Sbjct 76202426 TACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAATACAATCAT 76202485
Query 8376 -GAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAA 8434
||||| || |||||||| || || | | |||| ||||||||||| || |||||||
Sbjct 76202486 AAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTCCTTGACCAA 76202545
Query 8435 ATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGA 8494
|||| | ||||| || || |||| | | || |||| |||||| ||| |
Sbjct 76202546 TAGGATGAATCAAGAAAACAGCAGTAGCAACTGCAACATGAGCTGAATATGCAACAACAA 76202605
Query 8495 TCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAA 8554
|||| || | |||||| | ||| | | ||||||| | |||||| ||| ||
Sbjct 76202606 TCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTG 76202665
Query 8555 TTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCACTCAT 8614
|||| | |||||| | | || | |||||| ||||| || || || ||||| ||||
Sbjct 76202666 CACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATTGTATAACCATTCAT 76202725
Query 8615 CTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAA 8674
| | | ||| |||||||||| || || || || ||||| || || | |||| ||||
Sbjct 76202726 CAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGCCGTAGAAGTAGGAA 76202785
Query 8675 CGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAA 8734
| ||||||||| || || ||||||||||| | || ||||| | ||||| |||||||
Sbjct 76202786 TAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAG--ACAGGCTCACGAA 76202843
Query 8735 TACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAG 8794
|||| | ||||| || || |||||||| || || | | ||||| | || || |
Sbjct 76202844 TACCATAAATATCTACTGGAGGAGCAGCGATGAAGGTGATAATAAATACGGAAGTTGCGG 76202903
Query 8795 CTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTT 8846
|| ||| ||| ||||| | ||| ||||| |||| ||||| | |||
Sbjct 76202904 TCAATAAGGTAGGGATCATCAAAACATTGAACCACCCGATGTAAAGACGGTT 76202955
>seq1
Length=275477322
Score = 560 bits (620), Expect = 1e-154
Identities = 700/957 (73%), Gaps = 2/957 (0%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| |||| |||||||| || ||||| | ||| ||||| ||||||||||| | ||
Sbjct 183994002 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 183993943
Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010
|| | ||| | | ||| |||| ||| ||| | ||| | | |||||| || |||
Sbjct 183993942 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 183993883
Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070
||||| || || ||||| || |||||||||||||| || | |||||| | || ||| |||
Sbjct 183993882 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAAC 183993823
Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129
|| | | ||| || || | | ||| | ||||||||| | | | | |||||| |||
Sbjct 183993822 CAGATCCCTACGACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 183993763
Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189
| | ||||| ||||||||||||| |||||| || ||||||||||| ||||| ||||| ||
Sbjct 183993762 CTA-GCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGT 183993704
Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249
|||||||||||||||||| || ||||| | || |||||| | |||||| || || ||
Sbjct 183993703 CTCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCT 183993644
Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309
||| | | ||| || || || ||||| |||||||||||||| || || || ||||| |
Sbjct 183993643 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 183993584
Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369
||| ||||| ||| ||| || || ||||||||||| ||||| || ||||| ||||||||
Sbjct 183993583 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATAC 183993524
Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429
| ||| ||||| || |||||||| || |||| |||||| ||||||||||| || ||
Sbjct 183993523 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 183993464
Query 8430 ACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTAC 8489
||||| ||||| | ||||| || || |||||| | || ||||| |||||| ||
Sbjct 183993463 ACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 183993404
Query 8490 ACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGC 8549
| ||||| || | |||||| | ||| | | ||||||| | |||||| |||
Sbjct 183993403 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACA 183993344
Query 8550 AGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCA 8609
|| | |||| | |||||| | | || | || ||| ||||| || || || |||||
Sbjct 183993343 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 183993284
Query 8610 CTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGA 8669
||||| | | |||||||||||||| || || || || ||||| || || ||||
Sbjct 183993283 TTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGT 183993224
Query 8670 TGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTC 8729
|||| | ||||||||| || || ||||||||||| | || ||||| | |||||| ||
Sbjct 183993223 AGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTC 183993164
Query 8730 ACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGC 8789
||||||||| || ||||| || || |||||||| || || || | ||||| | ||
Sbjct 183993163 ACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGT 183993104
Query 8790 AGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTT 8846
|| | || ||| ||| ||||| | ||| || ||||| |||| ||||| | |||
Sbjct 183993103 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTT 183993047
Score = 194 bits (214), Expect = 2e-44
Identities = 334/482 (69%), Gaps = 6/482 (1%)
Strand=Plus/Plus
Query 8362 TGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAAT 8421
|||||||| | ||| ||||| || |||||||| || |||| |||||| |||| ||||||
Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220
Query 8422 GAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCA-CT 8480
|| ||||||| ||||| | ||||| || | || ||||| ||| |||| ||
Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGT---AGTAGCAGCTACAACAGCAGCT 150871277
Query 8481 --ATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTA 8538
|||||| ||| ||||| || | |||||| | ||| | | ||||||| | |
Sbjct 150871278 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 150871337
Query 8539 CCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCG 8598
||||| ||| || | |||| | |||||| | || | || ||| ||||| ||
Sbjct 150871338 CCCATATAACAAGCTACACCAAGTAAGAAGTGTGGAACAATTAGCTCATAAGGACCACCA 150871397
Query 8599 TTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATA 8658
|| || ||||| ||||| | | |||||||||||||| || || || || ||||| ||
Sbjct 150871398 TTGTATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATC 150871457
Query 8659 GCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCT 8718
|| |||| |||| | ||||||| | || || ||||||||||| | || |||||
Sbjct 150871458 GCCGCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACCA 150871517
Query 8719 GCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATA 8778
| |||| | |||| |||||| || ||||| || | |||||||| || || | | |||
Sbjct 150871518 GAAACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAAGGTGATAATA 150871577
Query 8779 AAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAA 8838
|| | || || | || ||| ||| ||| | | ||| || ||||| |||| |||
Sbjct 150871578 AATACGGAAGTTGCGGTCAATAAGGTAGGGATCGTCAAAACACCGAACCACCCGATGTAA 150871637
Query 8839 AG 8840
||
Sbjct 150871638 AG 150871639
>seq17829
Length=1032
Score = 515 bits (570), Expect = 5e-141
Identities = 701/976 (72%), Gaps = 4/976 (0%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||||||||| ||||| || || ||||| | ||||||||||||||||||||| | |||
Sbjct 1007 GCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 948
Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008
|| | ||| ||||| ||| |||| ||| ||| | ||| | | |||||| || |
Sbjct 947 GCACGGTTAATAATA--TCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGG 890
Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068
|||||||||| || || || || | || || ||||| |||| ||||| | | || |
Sbjct 889 ATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAA 830
Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128
|||| | || ||| || || | | ||| || ||||| || | | | | ||||| |
Sbjct 829 ACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTGA 770
Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188
| ||||| |||||||| |||| ||||| || ||||||||||| |||||||||||||
Sbjct 769 AACTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGG 710
Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248
| ||||| |||||||| || | ||||| | || ||| || | ||| || || || |
Sbjct 709 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCC 650
Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308
|||| | | ||| || || || |||||||||||||||||||| || || || ||||| |
Sbjct 649 TGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATA 590
Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368
||| ||||| ||| ||| || || || ||||||||||| |||||||| || || ||||
Sbjct 589 CACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATA 530
Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428
| | ||| ||||| || ||||||||||| ||||||||||| ||||| || || || |
Sbjct 529 CAATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCTT 470
Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488
|||| | ||| || | ||||| || || |||||| | || ||||| |||||| |
Sbjct 469 GACCTATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAA 410
Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548
|| ||||| || | |||||| | || | | ||||||| | ||||||||||
Sbjct 409 CAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAAC 350
Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608
|| | |||| | |||||| | | || | | ||||||||| || || || ||||
Sbjct 349 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAACC 290
Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668
| ||||| | | ||||||||||| || ||||| ||||| || |||||||| ||||
Sbjct 289 ATTCATCAACGGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCAGAAG 230
Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728
|||| | |||||||| || || ||||||||||| | | || || | |||||| |
Sbjct 229 TAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCT 170
Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788
|||||||||| || ||||| || || || |||||||| || || | ||||| || ||
Sbjct 169 CACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAG 110
Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848
|| | || ||| ||| ||||| | ||| |||||||| || | ||||| | ||| |
Sbjct 109 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 50
Query 8849 TTGTACTTGTAACCCA 8864
|| || || | |||
Sbjct 49 CAGTGCTGGTTATCCA 34
>seq3
Length=300915289
Score = 235 bits (260), Expect = 7e-57
Identities = 289/390 (74%), Gaps = 5/390 (1%)
Strand=Plus/Plus
Query 7927 TGCATAACTTCCATACCTAAGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATT 7986
|| || ||||||||||| | || || | ||| | | ||| |||| ||| ||| |
Sbjct 227133901 TGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACG 227133960
Query 7987 TTACCATTAACATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATT 8046
| ||| | | |||||| || |||||||| || || ||||| || ||||| |||||||
Sbjct 227133961 TGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCACA 227134020
Query 8047 GTGCAAATACCCATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAG 8106
|| | |||||| | || ||| ||||| | | ||| || || | | ||| | |||| |
Sbjct 227134021 GTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCCAAGAAGT-G 227134079
Query 8107 TGAAGACTTCTACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCC 8165
| |||| | | |||||| |||| | ||||| ||||||||||||| |||||| || ||
Sbjct 227134080 TAAAGAA--CGAGAGTTGTTGAAACTA-GCATATTGGAAGATTAATCAACCAAAATAACC 227134136
Query 8166 ATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTG 8225
||||||||| ||||| ||||| |||||||||||||||||||| || ||||| | ||
Sbjct 227134137 ATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCTTCATTAGC 227134196
Query 8226 AGACTCTTCTTCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGC 8285
|||||| | |||||| || || ||||| | | ||| || || || ||||| ||||||||
Sbjct 227134197 AGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGC 227134256
Query 8286 ACTGAAGAGTGATCCACCGAACATACCTGC 8315
|||||| || || || ||||| | ||| ||
Sbjct 227134257 ACTGAATAGGGAACCGCCGAATACACCAGC 227134286
Score = 185 bits (204), Expect = 1e-41
Identities = 196/256 (77%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 7998 ATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACC 8057
|||||| || |||||||| || || || || || ||||| |||||||| || | ||||||
Sbjct 48260024 ATCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACC 48259965
Query 8058 CATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCT 8117
| || ||| ||||| | | ||| || || | | ||| | ||||||||| | | |
Sbjct 48259964 TAAAGCAGTGAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACG 48259905
Query 8118 ACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAA 8176
| |||||| |||| | ||||| ||||||||||||| |||||| || || |||||||| |
Sbjct 48259904 AGAGTTGTTGAAACTA-GCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCA 48259846
Query 8177 CAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTT 8236
|||||||||| ||||||||||| |||||||| || ||||| | || |||||| | ||
Sbjct 48259845 CAATATTATAAGTCTCTTCTTCCTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTT 48259786
Query 8237 CAGTTGTCTCTCTGAT 8252
|||| || || |||||
Sbjct 48259785 CAGTGGTTTCCCTGAT 48259770
Score = 150 bits (166), Expect = 2e-31
Identities = 209/293 (71%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 8302 CCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCT 8361
||||| | ||| ||||| ||| ||| || || ||||||||||| ||||| || |||||
Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790
Query 8362 TGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAAT 8421
|||||||| | ||| ||||| || |||||||| || |||| |||||| |||||||||||
Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850
Query 8422 GAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTA 8481
|| ||||||| ||||| | ||||| || || || ||| | || ||||| |
Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGTAGCTGCAACAGGAGCTGAA 228897910
Query 8482 TATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCC 8541
||||| ||| ||||| || | |||||| | ||| | | ||||||| | ||||
Sbjct 228897911 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 228897970
Query 8542 ATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACC 8594
|| ||| || | |||| | |||||| | | || | || ||| |||||
Sbjct 228897971 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACC 228898023
>seq6
Length=240577051
Score = 172 bits (190), Expect = 7e-38
Identities = 274/393 (70%), Gaps = 0/393 (0%)
Strand=Plus/Minus
Query 8481 ATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACC 8540
|||||| ||| ||||| || | |||||| | ||| | | ||||||| | |||
Sbjct 76929303 ATATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 76929244
Query 8541 CATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTT 8600
||| ||| || | |||| | |||||| | | || | || ||| ||||| || ||
Sbjct 76929243 CATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATT 76929184
Query 8601 ATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGC 8660
|| ||||| ||||| | | |||||||||||||| || || || || ||||| || ||
Sbjct 76929183 GTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGC 76929124
Query 8661 GTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGC 8720
|||| |||| | ||||||||| || || ||||||||||| | || ||||| |
Sbjct 76929123 CGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGA 76929064
Query 8721 AACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAA 8780
|||||| ||||||||||| || ||||| || || |||||||| || || || | |||||
Sbjct 76929063 AACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAA 76929004
Query 8781 GCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAG 8840
| || || | || ||| ||| ||||| | ||| || ||||| |||| |||||
Sbjct 76929003 TACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAG 76928944
Query 8841 TCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873
| ||| | || || || | ||| | ||| ||
Sbjct 76928943 ACGGTTTTCAGTGCTAGTTATCCAGTTGCAGAA 76928911
Score = 104 bits (114), Expect = 3e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| |||| |||||||| || ||||| | ||| ||||| ||||||||||| | ||
Sbjct 71012520 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 71012579
Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010
|| | ||| | | ||| |||| ||| ||| | ||| | | |||||| || |||
Sbjct 71012580 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGAT 71012639
Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACC 8057
||||| || || ||||| || |||||||||||||| || | ||||||
Sbjct 71012640 TGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACC 71012686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615705439769080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |