Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq17829 581 9e-162
seq1 560 3e-155
seq4 556 4e-154
seq3 215 1e-51
seq6 190 6e-44
>seq17829
Length=1032
Score = 581 bits (644), Expect = 9e-162
Identities = 725/988 (73%), Gaps = 4/988 (0%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | || ||| | ||||||||||| |||| ||||||
Sbjct 16 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 75
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397
||||| ||||||| |||| || | | | || || | ||| |||||| |||||||||
Sbjct 76 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 133
Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457
||||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || |
Sbjct 134 TTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTT 193
Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517
|||| ||||| || || ||||||||| | | |||| | || ||||| | || |
Sbjct 194 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATTGGTTTGCACT 253
Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577
| ||| | || |||||||| || |||| |||||| | ||||||||||| || |||
Sbjct 254 TTTATCCAATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGCGGTCCATATG 313
Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637
| || | || | |||||| | | ||| | | |||| |||| || || |||||||
Sbjct 314 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 373
Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697
|| | || || || ||| | || ||||| |||||| || || || ||||| || |
Sbjct 374 TTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 433
Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757
| || ||||| || ||| | |||| ||| | || ||||| |||||||||||| ||||
Sbjct 434 CTGCTACTGCTGTTTTCTTGATCTACCCAATAGGTCAAGGAAGTTTTTCAGATGGTATGC 493
Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817
|||| || ||||| ||||| |||||||| ||| | || || |||||||| ||||| ||||
Sbjct 494 CTCTAGGAATTTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTC 553
Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877
||||||| || || || ||| | ||||| || || ||||| || || || | ||| |
Sbjct 554 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 613
Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937
||||||| ||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 614 CTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 673
Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997
||| | || |||| |||||||||||||| || || ||||| ||||| || || ||||
Sbjct 674 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATG 733
Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACT 43057
|||| ||||| || | ||||||||||||||| || || ||| ||| ||||| || |
Sbjct 734 GTTATTTTGGCCGATTGATCTTCCAATATGCGAGTTTCAACAATTCTCGTTCTTTACATT 793
Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117
||||||| || |||||||| || || || || ||||| || | | || |||| ||||
Sbjct 794 TCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTA 853
Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177
|||| || || || |||||||| || ||||||||||| | ||||||| ||| || ||
Sbjct 854 TGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTG 913
Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237
| || ||| |||||||||||| | || ||||| |||||||| | || || ||||| |
Sbjct 914 TAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATG 973
Query 43238 AGCGGAATGCACATAACTTCCCGCTTGA 43265
| || ||||| ||||| ||||| || ||
Sbjct 974 AACGTAATGCTCATAATTTCCCTCTAGA 1001
>seq1
Length=275477322
Score = 560 bits (620), Expect = 3e-155
Identities = 702/958 (73%), Gaps = 4/958 (0%)
Strand=Plus/Plus
Query 42316 AACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTAC 42374
||||||||||| | |||||||| ||||| ||||||| |||| || | | | || ||
Sbjct 183993047 AACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGAT-CCCTACCTTATTGACCGCAAC 183993105
Query 42375 CACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGA 42434
|| |||||| |||| ||||| ||||| ||||| ||||| |||||||| ||||||||
Sbjct 183993106 TTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 183993165
Query 42435 ACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAG 42494
||||| ||||| ||| | || ||||| ||||| || || |||||||| | | ||||
Sbjct 183993166 GCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTAC 183993225
Query 42495 CAGTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATG 42554
| || || ||| | ||||| || | || |||||||| | |||| |||||
Sbjct 183993226 TTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATG 183993285
Query 42555 GCTCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTC 42614
| | |||||||| || |||||| |||| | || | |||||| | | ||| | |
Sbjct 183993286 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 183993345
Query 42615 TTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGT 42674
||| |||| || || ||||||||| | ||| || || ||| | || ||||| |||
Sbjct 183993346 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 183993405
Query 42675 TGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCA 42734
||| || || || ||||| || || || ||||| || ||| | | ||||| |||| ||
Sbjct 183993406 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCA 183993465
Query 42735 AGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGT 42794
||| ||| || ||||| |||||| | || || || ||||| |||||||| ||| | ||
Sbjct 183993466 AGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGT 183993525
Query 42795 CTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGT 42854
|||||||| ||||| ||||| ||||||||||| || || ||| | ||||| || || ||
Sbjct 183993526 ATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGT 183993585
Query 42855 ATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCG 42914
||| || || || | ||| |||||||||||| | || |||||| | | | |
Sbjct 183993586 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 183993645
Query 42915 TGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGAC 42974
||||| |||||||| || ||| | || ||||| || |||||||| || |||||
Sbjct 183993646 GGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGAC 183993705
Query 42975 TTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTT 43034
|||||||||||| || || |||||||| ||||| || | |||||||||||||| | |||
Sbjct 183993706 TTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGC-TAGTT 183993764
Query 43035 T-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGT 43093
| || || ||| ||||| |||||||| | || |||||||| || || ||||| ||||
Sbjct 183993765 TCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGT 183993824
Query 43094 TCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAAT 43153
||||| || | || | ||||||||||| |||||| | ||||| || || || |||||||
Sbjct 183993825 TCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAAT 183993884
Query 43154 CACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCA 43213
| | ||||||| ||| || || || ||||||||||||||| | || ||||| |
Sbjct 183993885 CCGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTA 183993944
Query 43214 ACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
| ||||| | || || |||||||| || ||||| ||||||||||| || ||||| ||
Sbjct 183993945 ATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 183994002
>seq4
Length=191835039
Score = 556 bits (616), Expect = 4e-154
Identities = 715/981 (73%), Gaps = 4/981 (0%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || || |||||| | ||| || | ||||||||||| | ||||||||
Sbjct 47963820 TGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGGTGGTTC 47963879
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398
||||| ||||||| |||| || | | | || || || |||||| |||| |||||
Sbjct 47963880 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCAT 47963938
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| | || ||
Sbjct 47963939 CGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTA 47963998
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
||| ||||| || || |||||||| | | |||| | || || ||| | |||||
Sbjct 47963999 TGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTT 47964058
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
|| | || |||||||| | |||| |||||| | |||||||| || |||||| |
Sbjct 47964059 TTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 47964118
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
||| | || | |||||| | | ||| | | ||| |||| || || ||||||||
Sbjct 47964119 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 47964178
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698
| | ||| || || ||| | || ||||| |||||| || || || ||||| || ||
Sbjct 47964179 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 47964238
Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758
|| ||||| || ||| | | ||||| |||| ||||| ||| || ||||| |||||
Sbjct 47964239 TGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCC 47964298
Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818
| | || || || ||||| |||||||| ||| | || |||||||| ||||| ||||| ||
Sbjct 47964299 TTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCT 47964358
Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878
||||||||| || || ||| | ||||| || || ||||| || || || | ||| ||
Sbjct 47964359 TATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGC 47964418
Query 42879 TATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCA 42938
|||||||||| | || |||||| | | | | ||||| |||||||| ||
Sbjct 47964419 TATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGC 47964478
Query 42939 AAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGG 42998
||| | || ||||| || |||||||| || ||||||||||||||||| || || |||||
Sbjct 47964479 TAATGAAGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCATGG 47964538
Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACT 43057
||| ||||| || | |||||||||||||| | |||| || || ||| ||||| ||||
Sbjct 47964539 TTATTTTGGTCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACACT 47964597
Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117
|||| | || |||||||| || || ||||| ||||||||| || | || | |||||||
Sbjct 47964598 TCTTCTTGGCTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTA 47964657
Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177
|||| |||||| | ||||| || || || |||||||| | ||||||| ||| || |
Sbjct 47964658 TGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGCG 47964717
Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237
| || ||||||||||||||| | || ||||| || ||||| | || || |||||||
Sbjct 47964718 TTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACG 47964777
Query 43238 AGCGGAATGCACATAACTTCC 43258
| || ||||| ||||||||||
Sbjct 47964778 AACGTAATGCTCATAACTTCC 47964798
Score = 493 bits (546), Expect = 4e-135
Identities = 690/958 (72%), Gaps = 11/958 (1%)
Strand=Plus/Minus
Query 42316 AACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTAC 42374
||||||||||| | |||||||| ||| ||||||| |||| || | | | || ||
Sbjct 76202955 AACCGTCTTTACATCGGGTGGTTCAATGTTTTGATGAT-CCCTACCTTATTGACCGCAAC 76202897
Query 42375 CACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGA 42434
|| |||||| || | ||||| ||||| ||||| ||||| ||| |||| ||||||||
Sbjct 76202896 TTCCGTATTTATTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGTGA 76202837
Query 42435 ACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAG 42494
||||||| || ||| | || ||||| ||||| || || |||||||| | | ||||
Sbjct 76202836 GCCTGTCT--GGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTAC 76202779
Query 42495 CAGTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATG 42554
|| ||||| ||| | ||||| || | || ||||||| | |||| |||||
Sbjct 76202778 TTCTACGGCAATCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAATG 76202719
Query 42555 GCTCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGT--ATCTTC 42612
| | ||||||||||| ||||||||||| | || | |||||| | | ||| | |||
Sbjct 76202718 GTTATACAATGGCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTGCAGCTTG 76202659
Query 42613 TCTTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTT 42672
| || |||| || || ||||||||| | ||| || || ||| | || ||||| ||
Sbjct 76202658 TTATA--TGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTT 76202601
Query 42673 GTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGG 42732
||||| || || || | ||| || | || ||||| || ||| | | |||| ||||
Sbjct 76202600 GTTGCATATTCAGCTCATGTTGCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATTGGT 76202541
Query 42733 CAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTC-ATGTT 42791
||||| ||| || ||||| |||| | |||| || || ||||| |||||||| ||| |
Sbjct 76202540 CAAGGAAGTTTCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTATGAT 76202481
Query 42792 GGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGG 42851
|| || |||| ||||| ||||| ||||||||||| || || ||| | ||||| || ||
Sbjct 76202480 TGTATTTCAGGTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGG 76202421
Query 42852 CGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGT 42911
||||| || || || | ||| |||||||||||| | || |||||| | | |
Sbjct 76202420 TGTATTCGGCGGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 76202361
Query 42912 GCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGA 42971
| ||||| |||||||| || ||| | || ||||| || |||||||| || ||
Sbjct 76202360 CAGCGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAAGA 76202301
Query 42972 GACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTC 43031
||||||||||||||| || || |||||||| ||||| | | |||||||||||||| |
Sbjct 76202300 GACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGC-TA 76202242
Query 43032 GTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTT 43090
|||| || || ||| ||||| ||| |||| | || |||||||| || | ||||| |
Sbjct 76202241 GTTTCAACAACTCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATCT 76202182
Query 43091 GGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACC 43150
|||||||| || | || | |||| |||||| || ||| | ||||| || || || ||||
Sbjct 76202181 GGTTCACTGCTTTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAACC 76202122
Query 43151 AATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTG 43210
|||| | ||||||| ||| ||| || || |||||||||| |||| | || ||||
Sbjct 76202121 AATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAACCGTG 76202062
Query 43211 CCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCT 43268
| || ||||| | || || |||||||| || ||||| || |||||||| || |||||
Sbjct 76202061 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 76202004
>seq3
Length=300915289
Score = 215 bits (238), Expect = 1e-51
Identities = 285/392 (73%), Gaps = 5/392 (1%)
Strand=Plus/Minus
Query 42847 GCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCT 42906
|| || ||||| || || || | ||| |||||||||||| | || |||||| |
Sbjct 227134286 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 227134227
Query 42907 CTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAG 42966
| | | ||||| |||||||| || ||| | || ||||| || ||||||||
Sbjct 227134226 TTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAA 227134167
Query 42967 GAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATAT 43026
|| ||||||||||||||||| || || |||||||| ||||| | | ||||||||||||
Sbjct 227134166 GAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATAT 227134107
Query 43027 GCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGG 43085
|| | |||| || || ||| ||||| ||||||| | || |||||||| || || ||
Sbjct 227134106 GC-TAGTTTCAACAACTCTCGTTCTTTACACTTCT---TGGCTGCTTGGCCTGTCGTAGG 227134051
Query 43086 GATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTT 43145
||| ||||||||| || | || | |||||| |||| || ||| | ||||| || || ||
Sbjct 227134050 GATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTT 227133991
Query 43146 TAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAA 43205
|||||||| | ||||||| ||| ||| || || ||||||||||||||| | ||
Sbjct 227133990 CAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATCAA 227133931
Query 43206 TCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237
||||| || ||||| | || || || ||||
Sbjct 227133930 CCGTGCTAATCTTGGTATGGAAGTAATACACG 227133899
Score = 199 bits (220), Expect = 1e-46
Identities = 231/309 (75%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 42916 GAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACT 42975
||||| |||||||| || ||| | || ||||| || ||||| || || ||||||
Sbjct 48259776 GAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAAGAGACT 48259835
Query 42976 TATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT 43035
||||| ||||| || || || ||||| ||||| || | |||||||||||||| | ||||
Sbjct 48259836 TATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGC-TAGTTT 48259894
Query 43036 -AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTT 43094
|| || ||| ||||| |||||||| | || |||||||| || || ||||| |||||
Sbjct 48259895 CAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTT 48259954
Query 43095 CACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATC 43154
|||| || | || | ||||||||||| || ||| | |||||||| || || ||||||||
Sbjct 48259955 CACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATC 48260014
Query 43155 ACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAA 43214
| ||||||| ||| | || || ||||||||||||||| | || ||||| ||
Sbjct 48260015 TGTAGTTGATAGTCAAGGTTGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 48260074
Query 43215 CCTTGGCTT 43223
||||| ||
Sbjct 48260075 TCTTGGTTT 48260083
Score = 159 bits (176), Expect = 1e-34
Identities = 211/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 42568 GGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGC 42627
|| |||||| |||| | || | |||||| | | ||| | | ||| |||| ||
Sbjct 228898023 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGT 228897964
Query 42628 GAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCC 42687
|| ||||||||| | ||| || || ||| | || ||||| |||||| || || ||
Sbjct 228897963 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 228897904
Query 42688 CCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCA 42747
||||| || || | ||||| || ||| | | ||||| |||| ||||| ||| ||
Sbjct 228897903 CCTGTTGCAGCTACTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCT 228897844
Query 42748 GATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAA 42807
||||| |||||| | || || || ||||| |||||||| ||| | || |||||||| |||
Sbjct 228897843 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAA 228897784
Query 42808 CATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860
|| ||||| ||||||||||| || || ||| | ||||| || || ||||| ||
Sbjct 228897783 CACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 228897731
>seq6
Length=240577051
Score = 190 bits (210), Expect = 6e-44
Identities = 285/402 (71%), Gaps = 2/402 (0%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || || |||||| | ||| ||| | ||||||||||| | ||||||||
Sbjct 76928902 TGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAACCGTCTTTACATCGGGTGGTTC 76928961
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398
||||| |||||| ||||| || | | | || || || |||||| |||| |||||
Sbjct 76928962 GGTGTTTTGATGA-TCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCAT 76929020
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| | || ||
Sbjct 76929021 CGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTA 76929080
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
||| ||||| || || |||||||| | | |||| | || || ||| | |||||
Sbjct 76929081 TGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTT 76929140
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
|| | || |||||||| | |||| |||||| | |||||||| || |||||| |
Sbjct 76929141 TTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 76929200
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
||| | || | |||||| | | ||| | | ||| |||| || || ||||||||
Sbjct 76929201 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 76929260
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTA 42680
| | ||| || || ||| | || ||||| ||||||| ||
Sbjct 76929261 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCATA 76929302
Score = 123 bits (136), Expect = 7e-24
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 43111 AGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAG 43170
||||||||||| |||||| | ||||| || || || |||||||| | ||||||| |||
Sbjct 71012680 AGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAA 71012621
Query 43171 AATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTG 43230
|| || || ||||||||||||||| | || ||||| || ||||| | || ||
Sbjct 71012620 GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 71012561
Query 43231 ATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
|||||||| || ||||| ||||||||||| || ||||| ||
Sbjct 71012560 ATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 71012520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143498047928172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |