Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq1 646 1e-180 seq4 639 2e-178 seq17829 542 3e-149 seq3 241 2e-58 seq6 233 2e-56 >seq1 Length=275477322 Score = 646 bits (716), Expect = 1e-180 Identities = 727/970 (75%), Gaps = 12/970 (1%) Strand=Plus/Plus Query 154992 TGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGC 155051 ||| ||||| | || |||| |||||||||||| | ||||||||| | | | | || Sbjct 183993043 TGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGC 183993102 Query 155052 TGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCG 155111 || | || ||| |||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct 183993103 AACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCG 183993162 Query 155112 TGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCC 155171 ||| || || ||||||||||| | ||||| ||||| || || ||||||||| || | || Sbjct 183993163 TGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCC 183993222 Query 155172 TAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGA 155231 || ||| || || || | || || || || ||||||||||| ||| || ||||||| Sbjct 183993223 TACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGA 183993282 Query 155232 GTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCAC 155291 ||||| |||||||||||||||| | || | || | |||||| | | || | Sbjct 183993283 ATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT--- 183993339 Query 155292 AGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGAT 155348 ||| | | | |||||| ||||||||||| || |||||| || ||||| |||||||| Sbjct 183993340 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT 183993399 Query 155349 CTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTT 155408 ||||||||| || || || || | ||||| ||||| ||| | |||||||| | Sbjct 183993400 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTAT 183993459 Query 155409 CGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATAT 155468 |||||||| ||||||||||| |||||| | || || ||||||||||| |||| ||| Sbjct 183993460 TGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 183993519 Query 155469 GTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGC 155528 | | || ||||| ||||||||||| ||||||||||| || || |||||| | || ||||| Sbjct 183993520 GATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 183993579 Query 155529 AGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACT 155588 ||||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| | Sbjct 183993580 TGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 183993639 Query 155589 AATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGA 155648 ||| | ||||| ||||| | |||||| || | |||||||| || || |||||||| Sbjct 183993640 GATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGA 183993699 Query 155649 AGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGC 155708 ||| |||||||||||||| ||||||||||| || || ||||| | |||||||| ||||| Sbjct 183993700 AGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGC 183993759 Query 155709 ATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCAT 155768 ||||||||||| | | | ||||||||| | ||||| |||||||| || | || Sbjct 183993760 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGAT 183993819 Query 155769 CTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAA 155828 |||| |||||| | ||| | || |||||||| ||||| || || ||||| ||||| Sbjct 183993820 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAA 183993879 Query 155829 CCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAA 155885 ||| || ||||| || |||| ||| || || ||| ||||| || || | || Sbjct 183993880 CCAATCCGTAGTTGA---TAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAA 183993936 Query 155886 CCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGA 155945 ||| ||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct 183993937 CCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGA 183993996 Query 155946 CCTTGCTGCT 155955 || |||||| Sbjct 183993997 TCTAGCTGCT 183994006 Score = 250 bits (276), Expect = 3e-61 Identities = 341/475 (72%), Gaps = 6/475 (1%) Strand=Plus/Minus Query 155009 TCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTG 155068 |||| |||||||||||| | | ||||||| | | | | || || | || ||| Sbjct 150871632 TCGGGTGGTTCGGTGTTTTGACGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTA 150871573 Query 155069 TCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTT 155128 || ||||||| ||||| |||| ||||| |||||||||||| |||| | || |||||| Sbjct 150871572 TCACCTTCATCGCTGCTCCTCTAGTAGATATTGATGGTATTTGTGAGCTTGTTTCTGGTT 150871513 Query 155129 CTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTG 155188 ||||| | ||||| ||||| || || | ||||||| || | |||| ||| || || | Sbjct 150871512 CTTTACTTTATGGAAACAATATTATTTTTGGTGCTATTATTCCTACTTCTGCGGCGATCG 150871453 Query 155189 GTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTG 155248 | | || || || || ||||||||||| ||| || ||||||| ||||| |||||||||| Sbjct 150871452 GATTGCATTTTTACCCAATTTGGGAAGCTGCATCTATTGATGAATGGTTATACAATGGTG 150871393 Query 155249 GTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---GGTC 155305 |||||| | || | || |||||| | | || | ||| | | | |||| Sbjct 150871392 GTCCTTATGAGCTAATTGTTCCACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTC 150871336 Query 155306 GTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTG 155365 || ||||||||||| || |||||| || ||||| |||||||| ||||||||| || | Sbjct 150871335 GTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAG 150871276 Query 155366 CACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCT 155425 | | || ||||| |||| ||| | |||||||| | |||||||| ||||| Sbjct 150871275 CTGCTGTTGTAGCTGCTACTACTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCT 150871216 Query 155426 CTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCA 155480 || ||| |||||| | || || ||||||||||| |||| |||| | || ||||| Sbjct 150871215 CTAATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCA 150871161 Score = 100 bits (110), Expect = 3e-16 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 155003 TCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCT 155062 |||| |||| ||||||| | || | ||||||||| | | | | || || | | Sbjct 21980948 TCTACATCGGGTGGTTCGTTATTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTAT 21980889 Query 155063 TCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCG 155122 | ||| ||||||| ||||||| ||||| ||||| |||||||||||||||| || | Sbjct 21980888 TTATTACCGCCTTCGTTGCTGCTCCTCCAGTAGATGTTGATGGTATTCGTGAGCCTATTT 21980829 Query 155123 CTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTT 155176 |||| |||||| | ||||| ||| || || ||||||||| || | ||||||| Sbjct 21980828 CTGGCTCTTTACTTTATGGAAAC--TATTATTTCTGGTGCTATTATTCCTAGTT 21980777 >seq4 Length=191835039 Score = 639 bits (708), Expect = 2e-178 Identities = 733/983 (75%), Gaps = 12/983 (1%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| | || ||||| | || |||| |||||||||||| | | Sbjct 47963830 TCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGA 47963889 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| |||||||||| ||||| |||| Sbjct 47963890 TGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTC 47963949 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| ||||||||||||||||| || || ||||||||||| | ||||| ||||| | Sbjct 47963950 CAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 47964009 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | || ||||||||| || | |||| ||| || || || | || || || || |||| Sbjct 47964010 TTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTT 47964069 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||| ||| || ||||||| ||||| |||||||||||||||| | || | || Sbjct 47964070 GGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTC 47964129 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 47964130 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 47964186 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCG 155386 |||| || ||||| |||||||| ||||||||| || || || || | ||||| | Sbjct 47964187 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 47964246 Query 155387 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTA 155446 |||| ||| | |||||||| | |||||||| ||||||||||| |||||| | || | Sbjct 47964247 CTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 47964306 Query 155447 TCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACC 155506 | ||||||||||| |||| |||| | || ||||| ||||||||||| ||||||||||| | Sbjct 47964307 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATC 47964366 Query 155507 CCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACG 155566 | || |||||| | || ||||| ||||| ||||| || || || ||| ||||||||| | Sbjct 47964367 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 47964426 Query 155567 GTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATG 155626 |||| ||||| || ||| | ||| | ||||| ||||| | |||||| || | | Sbjct 47964427 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAG 47964486 Query 155627 GTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCG 155686 ||||||| || || ||||||||||| |||||||||||||| ||||||||||| || || | Sbjct 47964487 GTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTG 47964546 Query 155687 GTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTG 155746 |||| | |||||||| ||||| ||||||||||| | | | ||||||||| | | Sbjct 47964547 GTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 47964606 Query 155747 CTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCA 155806 |||| |||||||| || | |||||| |||||| | ||| | || |||||||| | Sbjct 47964607 CTGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTA 47964666 Query 155807 ACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCC 155863 |||| || || ||||| |||||||| || ||||| || |||| ||| || || Sbjct 47964667 ACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGA---TAGTCAAGGTCGCGTTATTA 47964723 Query 155864 CTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTA 155923 ||| ||||| || || | ||||| ||| |||||||||||||||||||||||| |||| Sbjct 47964724 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 47964783 Query 155924 ACGCTCACAACTTCCCTCTTGAC 155946 | ||||| ||||||| ||| ||| Sbjct 47964784 ATGCTCATAACTTCCTTCTAGAC 47964806 Score = 581 bits (644), Expect = 4e-161 Identities = 714/970 (74%), Gaps = 15/970 (2%) Strand=Plus/Minus Query 154993 GACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCT 155052 || ||||| | || |||| |||||| |||| | ||||||||| | | | | || Sbjct 76202958 GAAAACCGTCTTTACATCGGGTGGTTCAATGTTTTGATGATCCCTACCTTATTGACCGCA 76202899 Query 155053 GCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGT 155112 || | || ||| || ||||||| ||||| ||||| ||||| ||| ||||||||||| Sbjct 76202898 ACTTCCGTATTTATTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGT 76202839 Query 155113 GAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCT 155172 || || ||| |||||||||| | ||||| ||||| || || ||||||||| || | ||| Sbjct 76202838 GAGCCTGTC--TGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCT 76202781 Query 155173 AGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAG 155232 | ||| | ||||| || | || || || || |||||||||| ||| || ||||||| Sbjct 76202780 ACTTCTACGGCAATCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAA 76202721 Query 155233 TGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 155292 ||||| |||||||| ||||||| || || | || | |||||| | | || || Sbjct 76202720 TGGTTATACAATGGCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTG---CA 76202664 Query 155293 GCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATC 155349 || | | | |||||| ||||||||||| || |||||| || ||||| |||||||| Sbjct 76202663 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATT 76202604 Query 155350 TGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTC 155409 ||||||||| || || | || | | ||| ||||| ||| | || ||||| | Sbjct 76202603 GTTGTTGCATATTCAGCTCATGTTGCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATT 76202544 Query 155410 GGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTAT-AT 155468 |||||||| ||||||||||| |||| | |||| || ||||||||||| |||| | || Sbjct 76202543 GGTCAAGGAAGTTTCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTAT 76202484 Query 155469 GTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGC 155528 | | || || || | ||||||||| ||||||||||| || || |||||| | || ||||| Sbjct 76202483 GATTGTATTTCAGGTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 76202424 Query 155529 AGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACT 155588 ||||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| | Sbjct 76202423 TGGTGTATTCGGCGGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 76202364 Query 155589 AATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGA 155648 ||| | ||||| ||||| | |||||| || | |||||||| || || ||||| || Sbjct 76202363 GATCAGCGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGA 76202304 Query 155649 AGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGC 155708 ||| |||||||||||||| ||||||||||| || || |||| | |||||||| ||||| Sbjct 76202303 AGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGC 76202244 Query 155709 ATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCAT 155768 ||||||||||| | | | ||| ||||| | ||||| |||||||| | | || Sbjct 76202243 TAGTTTCAACAACTCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGAT 76202184 Query 155769 CTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAA 155828 |||| |||||| | ||| | | |||||||||||||| || || ||||| ||||| Sbjct 76202183 CTGGTTCACTGCTTTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAA 76202124 Query 155829 CCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAA 155885 ||| || ||||| || |||| ||| | || || ||| ||||| | || | || Sbjct 76202123 CCAATCCGTAGTTGA---TAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAA 76202067 Query 155886 CCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGA 155945 ||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||| || Sbjct 76202066 CCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 76202007 Query 155946 CCTTGCTGCT 155955 || ||||| Sbjct 76202006 TCTAACTGCT 76201997 >seq17829 Length=1032 Score = 542 bits (600), Expect = 3e-149 Identities = 701/967 (72%), Gaps = 6/967 (1%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || | || ||||| |||||| | ||||||||| | | | | | Sbjct 47 CTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 106 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct 107 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTC 166 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 |||| || || |||| ||| || | ||||| ||||| || || |||||||| || | | Sbjct 167 GTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTC 226 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || |||||| | ||||| ||||| || |||||||| ||| | |||||| Sbjct 227 CTACTTCTGCGGCTATTGGTTTGCACTTTTATCCAATATGGGAAGCTGCATCCGTTGATG 286 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||| ||||| | |||| | || | |||||| | | || | Sbjct 287 AATGGTTATACAATGGCGGTCCATATGAACTAATTGTTCTACACTTCTTACTTGGTGTAG 346 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct 347 CTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTG 406 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 ||||||||| || || || || | ||||| ||||| ||| | | || || | | Sbjct 407 CTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATAG 466 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| ||| || |||| |||||||| || || ||||||||||| |||| |||| Sbjct 467 GTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATGA 526 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || || || || || || ||||| ||||||||||| || |||||| | || ||||| | Sbjct 527 TTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTG 586 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| ||||| || || || ||| ||||||||||||||| ||||| || ||| | | Sbjct 587 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGA 646 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | ||||| || || | || ||| || | ||||||| ||||| ||||| |||| Sbjct 647 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 706 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||| ||||| ||||| ||||||||||| || || || || | |||||||| ||||| Sbjct 707 AAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCGA 766 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 |||||||| || | | | || ||||| || ||||| |||||||| || | |||| Sbjct 767 GTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCT 826 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || || || | ||| | || ||||| ||||| | || |||||||| || |||| Sbjct 827 GGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACC 886 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | || ||||| || |||| ||| || || ||| ||||| || ||| |||||| Sbjct 887 AATCCGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACC 943 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 | ||| |||||||||||||| ||||| || ||||| ||||| || |||||||| ||| Sbjct 944 GTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACT 1003 Query 155948 TTGCTGC 155954 | ||||| Sbjct 1004 TAGCTGC 1010 >seq3 Length=300915289 Score = 241 bits (266), Expect = 2e-58 Identities = 296/401 (74%), Gaps = 9/401 (2%) Strand=Plus/Minus Query 155527 GCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCA 155586 || ||||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| Sbjct 227134286 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 227134227 Query 155587 CTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAA 155646 | ||| | ||||| ||||| | |||||| || | |||||||| || || |||||| Sbjct 227134226 TTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGAA 227134167 Query 155647 GAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTAT 155706 ||||| |||||||||||||| ||||||||||| || || ||| | | |||||||| ||| Sbjct 227134166 GAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAATAT 227134107 Query 155707 GCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGC 155766 || ||||||||||| | |||| || |||| | ||||| |||||||| || | Sbjct 227134106 GCTAGTTTCAACAACTCTCG--TTCTTTAC-ACTTCTTGGCTGCTTGGCCTGTCGTAGGG 227134050 Query 155767 ATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTC 155826 |||||| ||| || | ||| | || ||||||||||||| || || ||||| ||| Sbjct 227134049 ATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATTTC 227133990 Query 155827 AACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTT 155883 ||||| || ||||| || |||| ||| | || || ||| ||||| || || | Sbjct 227133989 AACCAATCCGTAGTTGA---TAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATC 227133933 Query 155884 AACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAA 155924 ||||| ||| |||||||||||||||||| |||| ||||| Sbjct 227133932 AACCGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892 Score = 197 bits (218), Expect = 2e-45 Identities = 187/239 (78%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| || ||||| |||||||| ||||||||| Sbjct 228897969 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 228897910 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | ||| | ||||| ||| | |||||||| | |||||||| | Sbjct 228897909 TCAGCTCCTGTTGCAGCTACTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGT 228897850 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 |||||||||| |||||| | || || ||||||||||| |||| |||| | || ||||| Sbjct 228897849 TTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAG 228897790 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGG 155540 ||||||||||| ||||||||||| || || |||||| | || ||||| ||||| ||||| Sbjct 228897789 GCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 228897731 Score = 190 bits (210), Expect = 2e-43 Identities = 232/315 (74%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 155590 ATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAA 155649 ||| | ||||| ||||| | |||||| || | |||||||| || || || |||||| Sbjct 48259770 ATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAA 48259829 Query 155650 GAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCA 155709 || |||||||| ||||| |||||||| || || || ||||| | |||||||| ||||| Sbjct 48259830 GAGACTTATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCT 48259889 Query 155710 TCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATC 155769 ||||||||||| | | | ||||||||| | ||||| |||||||| || | ||| Sbjct 48259890 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATC 48259949 Query 155770 TGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAAC 155829 ||| |||||| | ||| | || |||||||||||||| || |||||||| |||||| Sbjct 48259950 TGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAAC 48260009 Query 155830 CAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAAC 155886 || |||||||| || |||| ||| || || ||| ||||| || || | ||| Sbjct 48260010 CAATCTGTAGTTGA---TAGTCAAGGTTGCGTTATTAATACTTGGGCTGATATCATCAAC 48260066 Query 155887 CGCGCTGGTCTTGGT 155901 || ||| ||||||| Sbjct 48260067 CGTGCTAATCTTGGT 48260081 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 155858 TCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACG 155917 ||| || |||||||| || || | ||||| | | |||||||| |||||||||||||| Sbjct 9135924 TCAACCAAACATGGGCTGATATCATCAACCGTG-TAATCTTGGTACGGAAGTAATGCACG 9135982 Query 155918 AGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 | ||||| ||||||||||||||||| || || |||||| Sbjct 9135983 AACGTAATGCTCACAACTTCCCTCTAGATCTAGCTGCT 9136020 >seq6 Length=240577051 Score = 233 bits (258), Expect = 2e-56 Identities = 289/394 (73%), Gaps = 6/394 (2%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| ||||| |||| ||||| | || |||| |||||||||||| | | Sbjct 76928912 TCTGCAACTGGATAACTAGCACTGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGA 76928971 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| |||||||||| ||||| |||| Sbjct 76928972 TGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTC 76929031 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| ||||||||||||||||| || || ||||||||||| | ||||| ||||| | Sbjct 76929032 CAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATA 76929091 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | || ||||||||| || | |||| ||| || || || | || || || || |||| Sbjct 76929092 TTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTT 76929151 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||| ||| || ||||||| ||||| |||||||||||||||| | || | || Sbjct 76929152 GGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTC 76929211 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACC 155326 | |||||| | | || | ||| | | | |||||| ||||||||||| || || Sbjct 76929212 TACACTTCTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 76929268 Query 155327 GTCTTGGCATGCGTCCTTGGATCTGTGTTGCATA 155360 |||| || ||||| |||||||| ||||||||| Sbjct 76929269 GTCTGGGTATGCGCCCTTGGATTGTTGTTGCATA 76929302 Score = 127 bits (140), Expect = 2e-24 Identities = 128/165 (78%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT--- 155850 || |||||||| ||||| || || ||||| |||||||| || ||||| || |||| Sbjct 71012677 ACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGA---TAGTCAA 71012621 Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910 ||| || || ||| ||||| || || | ||||| ||| |||||||||||||||| Sbjct 71012620 GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 71012561 Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 |||||||| ||||| ||||| ||||||||||| || || |||||| Sbjct 71012560 ATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 71012516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584686147438840