Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq4 547 2e-151 seq1 529 5e-146 seq17829 480 2e-131 seq6 206 8e-49 seq3 172 2e-38 seq5428 86.0 2e-12 >seq4 Length=191835039 Score = 547 bits (606), Expect = 2e-151 Identities = 714/982 (73%), Gaps = 8/982 (1%) Strand=Plus/Minus Query 40538 GTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCTGTCT 40597 ||||||| | ||||| ||||| ||||| |||||||||||||||||||| ||| | | Sbjct 47964806 GTCTAGAAGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACG 47964747 Query 40598 GTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACTGGTT 40657 ||| | | ||||||||||||| ||| || ||| | | || ||||| || ||||| Sbjct 47964746 GTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACGGATTGGTT 47964687 Query 40658 AAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCCATAT 40717 || || || ||||| |||||||| ||||||||| ||||| | | || | ||| || Sbjct 47964686 GAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGAT 47964627 Query 40718 GCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAG 40776 || | || || ||||| ||||||| |||||||| | ||| |||||||| || Sbjct 47964626 CCCTACGACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGTTGAAACTAG 47964568 Query 40777 CATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGC 40836 ||||||| || |||| || |||||| ||||| || ||||| || |||||||||||||| Sbjct 47964567 CATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTT 47964508 Query 40837 CTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGA 40896 |||| |||||||| || || || | || || ||| |||| ||||| |||| || | Sbjct 47964507 CTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCA 47964448 Query 40897 ---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGC 40953 | |||| || ||||| || ||||||||| || | | ||| || || || | Sbjct 47964447 AACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAATACAC 47964391 Query 40954 CTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAA 41013 | || || || | ||| || ||||| ||||| || |||||||||||||| ||||| |||| Sbjct 47964390 CAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCTGGAATACAA 47964331 Query 41014 ACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGAC 41073 ||| |||||||| || ||| ||||||||||||||||||||||||||| || |||| Sbjct 47964330 TCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGAC 47964271 Query 41074 CGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAA 41133 | | ||||||| ||||| ||||| ||| |||| | ||||||| ||||| ||| Sbjct 47964270 CAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAG 47964211 Query 41134 ATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTG 41193 ||||| || | |||||| || | | | ||||||||||| | ||| || | Sbjct 47964210 CAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAG 47964151 Query 41194 CTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACT 41253 |||| || | ||| ||||| | ||||| || | ||| || || || ||||||| ||| | Sbjct 47964150 CTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATT 47964091 Query 41254 CGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCG 41313 | || | | | |||||||| |||||||| ||||| | |||||| || ||| | | Sbjct 47964090 CATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTAG 47964031 Query 41314 GAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCAC 41373 ||| | ||| ||||| ||||||||||| || || | ||| || || ||||| ||||||| Sbjct 47964030 GAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCAC 47963971 Query 41374 GTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAACATGTGGTAG 41433 | || ||||| |||||||| || || || ||||| |||||||| || || | || | Sbjct 47963970 GAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTG 47963911 Query 41434 CAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGG 41493 | || | ||| | || ||||| | ||||| ||||| || | ||| || ||||| |||| Sbjct 47963910 CGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGACGGTTTTCGG 47963851 Query 41494 TGCTAGTGACCCAGTTACAAAA 41515 ||||||| | |||||| || || Sbjct 47963850 TGCTAGTTATCCAGTTGCAGAA 47963829 Score = 455 bits (504), Expect = 9e-124 Identities = 681/959 (71%), Gaps = 11/959 (1%) Strand=Plus/Plus Query 40539 TCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCTGTCTG 40598 |||||||| ||||||||||| ||||| |||||||||||||||||||| ||| | | | Sbjct 76202007 TCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGG 76202066 Query 40599 TTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACTGGTTA 40658 || | | || |||||||||| ||| || | ||| | | || ||||| || ||||| Sbjct 76202067 TTGATGATATTAGCCCAAGTATTAATAACGTGACCTTGACTATCAACTACGGATTGGTTG 76202126 Query 40659 AAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATG 40718 || || || ||||| ||||| || |||||| || ||||| | | || | ||| || Sbjct 76202127 AAATTGAATCCATTTAGGTTGAATGCCATATTACTAATACCTAAAGCAGTGAACCAGATC 76202186 Query 40719 CCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGC 40777 || || || || ||||| ||||| |||| ||||| | ||| |||||||| ||| Sbjct 76202187 CCTATGACAGGCCAAGCAGCCAAG-AAGATGTGTAAAGAACGAGAGTTGTTGAAACTAGC 76202245 Query 40778 ATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCC 40837 |||||| || |||| | |||||| ||||| || ||||| || |||||||||||||| | Sbjct 76202246 ATATTGGAAGATTAATTGACCAAAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTC 76202305 Query 40838 TTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGA- 40896 || |||||||| || || || | || || ||| |||| ||||| || | || | Sbjct 76202306 ATCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTTCGCTGATCAA 76202365 Query 40897 --TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCC 40954 | |||| || ||||| || ||||||||| || | | ||| || || || || Sbjct 76202366 ACTAGAGG--TTACCAAGG-AACCATGCATAGCATTGAATAGGGAACCGCCGAATACACC 76202422 Query 40955 TGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAA 41014 || || || | ||| || ||||| ||||| || |||||||||||| | || || |||| Sbjct 76202423 AGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTACCTGAAATACAAT 76202482 Query 41015 CAT-GAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGAC 41073 ||| |||||||| || ||| ||||| ||| ||||||||||||||||| || |||| Sbjct 76202483 CATAAAAGTTGAAAGTACCAGATATTCCAAAATGCATACCATCAGAGAAACTTCCTTGAC 76202542 Query 41074 CGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAA 41133 | | |||| || ||||| ||||| ||| ||| | |||||| ||||| |||| Sbjct 76202543 CAATAGGATGAATCAAGAAAACAGCAGTAGCAACTGCAACATGAGCTGAATATGCAACAA 76202602 Query 41134 ATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTG 41193 ||||| || | |||||| || | | | ||||||||||| | ||| || | Sbjct 76202603 CAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAG 76202662 Query 41194 CTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACT 41253 || | || | ||| ||||| | ||||| || ||||| || ||||| ||||||| ||| | Sbjct 76202663 CTGCACCAAGTAAGAAGTGTAGAACAATTAGCTGATAAGGACCGCCATTGTATAACCATT 76202722 Query 41254 CGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCG 41313 | || | | | ||||||| |||||||| ||||| | ||||||||| |||| | | Sbjct 76202723 CATCAACAGATGCAACTTCCCAAATTGGGTAAAAATGCAATCCGATTGCCGTAGAAGTAG 76202782 Query 41314 GAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCAC 41373 ||| | ||| ||||| ||||||||||| || || | ||| || || | || ||||||| Sbjct 76202783 GAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACC--AGACAGGCTCAC 76202840 Query 41374 GTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAACATGTGGTAG 41433 | || |||| |||||||| || || || ||||| |||| ||| || || | || | Sbjct 76202841 GAATACCATAAATATCTACTGGAGGAGCAGCGATGAAGGTGATAATAAATACGGAAGTTG 76202900 Query 41434 CAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCG 41492 | || | ||| | || ||||| | ||| ||||| || | ||| || ||||| ||| Sbjct 76202901 CGGTCAATAAGGTAGGGATCATCAAAACATTGAACCACCCGATGTAAAGACGGTTTTCG 76202959 >seq1 Length=275477322 Score = 529 bits (586), Expect = 5e-146 Identities = 701/967 (72%), Gaps = 8/967 (1%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| || Sbjct 183994006 AGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAG 183993947 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 183993946 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 183993887 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| |||||||| ||||||||| ||||| | | || Sbjct 183993886 GGATTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACCTAAAGCAGT 183993827 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| ||||||| |||||||| | ||| |||| Sbjct 183993826 GAACCAGATCCCTACGACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGT 183993768 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || |||| || |||||| ||||| || ||||| || ||||||| Sbjct 183993767 TGAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTAT 183993708 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| |||| |||||||| || || || | || || ||| |||| ||||| | Sbjct 183993707 AAGTCTCTTCTTCTTGACCAAATTTGTAACCTTCATTAGCAGACTCATTTTCAGTGGTTT 183993648 Query 40888 CCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCAC 40944 ||| || | | |||| || ||||| || ||||||||| || | | ||| | Sbjct 183993647 CCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGC 183993591 Query 40945 CAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTT 41004 | || || || || || || | ||| || ||||| ||||| || |||||||||||||| | Sbjct 183993590 CGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCCT 183993531 Query 41005 GGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAG 41064 |||| |||| ||| |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 183993530 GGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAAC 183993471 Query 41065 AACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGT 41124 || ||||| | ||||||| ||||| ||||| ||| |||| | ||||||| | Sbjct 183993470 TTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAAT 183993411 Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| ||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 183993410 ATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCA 183993351 Query 41185 CGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGT 41244 || ||||| || | ||| ||||| | ||||| || | ||| || || || |||| Sbjct 183993350 TATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGT 183993291 Query 41245 ATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGT 41304 ||| ||| || || | | | |||||||| |||||||| ||||| | |||||| || Sbjct 183993290 ATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCG 183993231 Query 41305 TAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAA 41364 ||| | |||| | ||| ||||| ||||||||||| || || | ||| || || |||| Sbjct 183993230 CAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAA 183993171 Query 41365 CGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAAC 41424 | |||||||| || ||||| |||||||| || || || ||||| |||||||| || || Sbjct 183993170 CAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATA 183993111 Query 41425 ATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGC 41484 | || || || | ||| | || ||||| | ||||| ||||| || | ||| || | Sbjct 183993110 CGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGAC 183993051 Query 41485 GGTTGTC 41491 |||| || Sbjct 183993050 GGTTTTC 183993044 Score = 246 bits (272), Expect = 9e-61 Identities = 366/514 (71%), Gaps = 4/514 (1%) Strand=Plus/Plus Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||| ||| |||||||| || ||| ||||||||||||||||||| ||||||| Sbjct 150871161 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATTAGAGAAA 150871220 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAG-AGCTGCTGACAA-TGGAGCTG 41121 || ||||| | ||||||| ||||| |||| ||| ||| ||| |||| | ||||| Sbjct 150871221 CTTCCTTGACCAATAGGATAAATCAAGAAAACAG-TAGTAGCAGCT-ACAACAGCAGCTG 150871278 Query 41122 TGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTAC 41181 ||||| ||| ||||| || | |||||| || | | | ||||||||||| | || Sbjct 150871279 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 150871338 Query 41182 CAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGT 41241 | || ||||| || | ||| ||||| ||||| || | ||| || || || | Sbjct 150871339 CCATATAACAAGCTACACCAAGTAAGAAGTGTGGAACAATTAGCTCATAAGGACCACCAT 150871398 Query 41242 TGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTG 41301 |||||| ||| || || | | | |||||||| |||||||| ||||| | |||||| | Sbjct 150871399 TGTATAACCATTCATCAATAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCG 150871458 Query 41302 CGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGG 41361 | ||| | |||| | ||| ||| | ||||||||||| || || | ||| || || | Sbjct 150871459 CCGCAGAAGTAGGAATAATAGCACCAAAAATAATATTGTTTCCATAAAGTAAAGAACCAG 150871518 Query 41362 AAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGA 41421 |||| |||||| || ||||| |||||||| | || || ||||| |||| ||| || | Sbjct 150871519 AAACAAGCTCACAAATACCATCAATATCTACTAGAGGAGCAGCGATGAAGGTGATAATAA 150871578 Query 41422 AACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATA 41481 | | || || || | ||| | || ||| | | ||||| ||||| || | ||| | Sbjct 150871579 ATACGGAAGTTGCGGTCAATAAGGTAGGGATCGTCAAAACACCGAACCACCCGATGTAAA 150871638 Query 41482 GGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | |||| ||||||||||| | | |||| || || Sbjct 150871639 GATGGTTTTCGGTGCTAGTTATCTAGTTGCAGAA 150871672 Score = 102 bits (112), Expect = 2e-17 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 41277 ATTGGGTAGAAATGTAGTCCGATTGCGTTAGAG-CTCGGAACGACAGCTCCAGATATAAT 41335 |||||||| ||||| ||| || |||| |||| || |||| | ||| ||||| ||||| Sbjct 21980745 ATTGGGTAAAAATGCAGTTCGGTTGCCGTAGAAACTAGGAATAATAGCACCAGAAATAAT 21980804 Query 41336 ATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGG 41395 | ||| || || | ||| ||||| |||| |||||||| || ||||| | |||||| || Sbjct 21980805 A--GTTTCCATAAAGTAAAGAGCCAGAAATAGGCTCACGAATACCATCAACATCTACTGG 21980862 Query 41396 CGGTGCTGCGATAAAGGCGATTATGAAACATGTGGTAGCAGTTAGTAATGCTGGAATCAT 41455 || || || | |||||| | || || | || || || | ||| | || ||||| Sbjct 21980863 AGGAGCAGCAACGAAGGCGGTAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCAT 21980922 Query 41456 TAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGT 41500 | | | | ||||| || | ||| || | || ||||||||||| Sbjct 21980923 CAAAATAACGAACCACCCGATGTAGAGACAATTTTCGGTGCTAGT 21980967 >seq17829 Length=1032 Score = 480 bits (532), Expect = 2e-131 Identities = 699/985 (71%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||||||||||||| || || ||||| ||||| || ||||| ||||||||||| || | Sbjct 1008 AGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 949 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | ||||| || ||||||||| ||| ||| || ||| | | || ||||| || Sbjct 948 AGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGA 889 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 |||||||| || |||||||| | || ||||||||||| ||||| | | ||||| Sbjct 888 TTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 829 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 ||| || || | || || ||||| | |||||||| |||| | ||| ||||||||| Sbjct 828 CCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTGTTGAA 769 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 |||||||| || || | || ||||| ||||| || |||||||| || ||||| || Sbjct 768 ACTCGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 709 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 || | || ||||| || | || || | || |||||| |||| ||||| |||| Sbjct 708 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 649 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | ||||| || | | |||||||||||| || | | || || || || Sbjct 648 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATAC 589 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 || || || || | ||| || ||||||||||| ||||| || || || || || || || Sbjct 588 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAATAC 529 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTG 41071 || ||| |||||||| || ||| ||||||| |||||||||||| || ||| || || Sbjct 528 AATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCTGAAAAACTTCCTTG 469 Query 41072 ACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCAC 41131 ||| | ||| || | ||||| ||||| ||| |||| | ||||||| ||||| || Sbjct 468 ACCTATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 409 Query 41132 AAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGC 41191 | ||||| || | |||||| || | | ||||||||||| | ||| ||| Sbjct 408 AGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACA 349 Query 41192 TGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCA 41251 ||||| || | ||| ||||| | ||||| |||| |||||| ||||| ||||||| ||| Sbjct 348 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATATGGACCGCCATTGTATAACCA 289 Query 41252 CTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCT 41311 || || | | | |||||||| ||||| || || || | || || || ||| | Sbjct 288 TTCATCAACGGATGCAGCTTCCCATATTGGATAAAAGTGCAAACCAATAGCCGCAGAAGT 229 Query 41312 CGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTC 41371 |||| | || ||||| ||||||||||| || || | || || || ||||| ||||| Sbjct 228 AGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTC 169 Query 41372 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGG 41430 ||| || ||||| |||||||| || || || || || || ||||| || || ||| | | Sbjct 168 ACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 110 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 | || || | ||| | || ||||| | ||||||||||| || | ||| || ||||| | Sbjct 109 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 50 Query 41491 CGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| || | ||||||||| || Sbjct 49 CAGTGCTGGTTATCCAGTTACAGAA 25 >seq6 Length=240577051 Score = 206 bits (228), Expect = 8e-49 Identities = 281/392 (72%), Gaps = 0/392 (0%) Strand=Plus/Minus Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 ||||| |||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 76929302 TATGCAACAACAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 76929243 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 || ||||| || | ||| ||||| | ||||| || | ||| || || || ||| Sbjct 76929242 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 76929183 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| ||| || || | | | |||||||| |||||||| ||||| | |||||| || Sbjct 76929182 TATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCC 76929123 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||| | |||| | ||| ||||| ||||||||||| || || | ||| || || ||| Sbjct 76929122 GCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAA 76929063 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAA 41423 || |||||||| || ||||| |||||||| || || || ||||| |||||||| || || Sbjct 76929062 ACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAAT 76929003 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 | || || || | ||| | || ||||| | ||||| ||||| || | ||| || Sbjct 76929002 ACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCGATGTAAAGA 76928943 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || |||||||| | |||||| || || Sbjct 76928942 CGGTTTTCAGTGCTAGTTATCCAGTTGCAGAA 76928911 Score = 123 bits (136), Expect = 7e-24 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| || Sbjct 71012516 AGCAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATTACTTCCATACCAAG 71012575 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 71012576 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 71012635 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC 40699 || ||||| || || || ||||| |||||||| ||||||||| ||||| Sbjct 71012636 GGATTGGTTGAAATTGAATCCATTTAGGTTAAATGCCATAGTACTAATACC 71012686 >seq3 Length=300915289 Score = 172 bits (190), Expect = 2e-38 Identities = 237/331 (72%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 40560 TTACGCTCGTGCATTACTTCCATACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTA 40619 ||||| |||| |||||||||||||| ||| | | ||| | | ||||||||||||| Sbjct 227133892 TTACGTCCGTGTATTACTTCCATACCAAGATTAGCACGGTTGATGATATCAGCCCAAGTA 227133951 Query 40620 GGAATGACTTTACCATTAGCGTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTA 40679 ||| || | ||| | | || ||||| || ||||| || || || ||||| ||||| Sbjct 227133952 TTAATAACGTGACCTTGACTATCAACTACGGATTGGTTGAAATTGAATCCATTTAGGTTG 227134011 Query 40680 AAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCA 40739 || |||| |||| ||||| | | || | ||| || || | || || ||||| | Sbjct 227134012 AATGCCACAGTACTAATACCTAAAGTAGTGAACCAGATCCCTACGACAGGCCAAGCAGCC 227134071 Query 40740 AGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCA 40799 | ||||||||| | ||| |||||||| ||||||||| || |||| || |||| Sbjct 227134072 A---AGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCAACCA 227134128 Query 40800 AAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCG 40859 || ||||| || ||||| || |||||||||||||| |||| |||||||| || || || Sbjct 227134129 AAATAACCATGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGACCAAATTTGTAACCT 227134188 Query 40860 TAGTTCTGTGATTCAGTTTCCGTGGTCTCCC 40890 | || || ||| |||| ||||| |||| Sbjct 227134189 TCATTAGCAGACTCATTTTCAGTGGTTTCCC 227134219 Score = 170 bits (188), Expect = 6e-38 Identities = 215/293 (73%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 40607 ATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACTGGTTAAAGTTAAA 40666 ||||||||||||| ||| || ||| | | || ||||| || ||||| || || || Sbjct 48260057 ATCAGCCCAAGTATTAATAACGCAACCTTGACTATCAACTACAGATTGGTTGAAATTGAA 48259998 Query 40667 ACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATGCCAATAAC 40726 |||||| ||||| || ||||||||| ||||| | | || | ||| || || | || Sbjct 48259997 ACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGATCCCTACTAC 48259938 Query 40727 CGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAA 40785 || ||||| ||||||| |||||||| | ||| |||||||| ||||||||| | Sbjct 48259937 AGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGA 48259879 Query 40786 ATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGAC 40845 | |||| || |||||| |||||||| ||||| || || ||||||||||| ||||||||| Sbjct 48259878 AGATTAATCGACCAAAATAACCGTGAGCAGCCACAATATTATAAGTCTCTTCTTCCTGAC 48259819 Query 40846 CAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGATT 40898 |||| || || || | || || ||| |||| ||||| |||| ||| || Sbjct 48259818 CAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATGCTT 48259766 Score = 170 bits (188), Expect = 6e-38 Identities = 218/296 (74%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 || || || || || || || | ||| || ||||| ||||| || |||||||||||||| Sbjct 228897731 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCTGCC 228897790 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||| ||| |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 228897791 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 228897850 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGC--TAG-AGCTGCTGACAATGGAGCT 41120 || ||||| | ||||||| ||||| ||||| ||| |||||| ||| |||||| Sbjct 228897851 CTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGTAGCTGC-AACA--GGAGCT 228897907 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTA 41180 | ||||| ||| ||||| || | |||||| || | | | ||||||||||| | | Sbjct 228897908 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 228897967 Query 41181 CCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCC 41236 || || ||||| || | ||| ||||| | ||||| || | ||| || || Sbjct 228897968 CCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACC 228898023 >seq5428 Length=272540 Score = 86.0 bits (94), Expect = 2e-12 Identities = 87/111 (78%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 41000 TGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGA 41059 ||| ||||| |||| ||| |||||||| || ||| ||||||||||||| |||||||| Sbjct 118630 TGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCACGCCATCAGA 118571 Query 41060 GAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGC--TAG-AGCTGC 41107 |||| || ||||| | ||||||| ||||| ||||| ||| |||||| Sbjct 118570 GAAACTTCCTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGC 118520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143667606864726