Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 233 3e-55
seq2 233 3e-55
seq2243 192 9e-43
seq6 192 9e-43
seq5 181 2e-39
seq4 165 1e-34
seq1 165 1e-34
seq7 163 4e-34
>seq3
Length=300915289
Score = 233 bits (258), Expect = 3e-55
Identities = 246/324 (76%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| ||| || ||||||||||||||||||
Sbjct 250095930 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGGCCGCGCTTC 250095989
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| ||||||||| ||||||||||||||| ||| |||
Sbjct 250095990 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAG 250096049
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||||||| |||||||| || ||| ||| || |||||| ||| |||||
Sbjct 250096050 GCGACGAGGCGCTCGGCGAAGCGCTCCCCGCC------GTCGATCCAGCGCATGGCCCAG 250096103
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | ||| | ||| | ||||||| |||||| |||||| |||||||||||
Sbjct 250096104 TCGGCCTTGCGGCGCACGGCGGGGATGGTGTCGACGGCGCGGAAGAGGCGGTCCTTCTCG 250096163
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
| || || ||| || |||| || |||||||| |||| ||||||||||| |||
Sbjct 250096164 GCGCCATCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 250096223
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
||||||||||||||||| || |||
Sbjct 250096224 ATGGCGATCTGGAAGCCGTAGAAG 250096247
Score = 210 bits (232), Expect = 3e-48
Identities = 236/311 (76%), Gaps = 6/311 (2%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
||||| || |||||| |||||| |||||||||||||||| |||||||| | |||||||
Sbjct 250095624 TACTCCCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATGAGCTCCATC 250095683
Query 793968 CACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025
|| ||| |||||||| ||| ||| ||||| | ||| |||| | |||||||
Sbjct 250095684 CAGTCGAATGGGTTGGCGACGT--TGTACATCTTCTTGTGCCCCAGCGCCATGAGCAGGC 250095741
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||||||||||||| || |||||||||| |||||| || |||||||||||| |||||| |
Sbjct 250095742 GGTCGGCGACGAACTCGATGTACTGGCTCATGAGCCCGCCGTTCATGCCGACGAGCGCGA 250095801
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145
|||| |||| |||| ||| ||||| |||||| || ||||| ||| || ||||| |
Sbjct 250095802 CGGGGAGCGCGTCGCAGACGAACTCGCGCTCGATGTCAACGGCGTCGGCGACGATCT-CG 250095860
Query 794146 TGGGCACGTCGGACGACG-GCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204
|| |||| || || ||||| | ||| | |||||| |||||||| ||||||
Sbjct 250095861 CGGACACGGTCCTCGTCGAGCTTGCTGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCG 250095920
Query 794205 CAATGCAGACC 794215
||||| || ||
Sbjct 250095921 CAATGGAGGCC 250095931
Score = 192 bits (212), Expect = 9e-43
Identities = 182/232 (78%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| || ||||| || |||||||||| ||| |||||||| ||||||||||
Sbjct 250096254 GCCTCGGCGACCTGGACGTCGGACATGAAGCGGGAGGCGAGGTTCTCGAGCACGATGCCG 250096313
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG- 796268
||| ||||||||| |||||||| ||||| ||| ||||| |||||||||| | |||
Sbjct 250096314 TCGGAGGCGGCGAAGAAGGCGAGCACGTGAGAGATGAAGTGGCGCTCGTCGTTGGAGAGC 250096373
Query 796269 --CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
|| | |||||||| || ||||||| |||||| ||||||||||| ||||| |||||
Sbjct 250096374 GCCGCGTCCCAGTGGCGCGCGTCGGCGGAGAGGTCAACCTCCTCGGCCGTCCAGAAGGAC 250096433
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
||| | ||||| ||||| | |||||| ||| | |||| ||||| |||||||
Sbjct 250096434 GCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGTACCGGATCGGGAACA 250096485
Score = 183 bits (202), Expect = 5e-40
Identities = 186/240 (78%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| ||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 22180304 TGAACTTGGTCACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 22180363
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC-GCTTGTTAGTG 1485588
|| |||||||| | ||||||||||||||||| | ||| || | || |||||| |
Sbjct 22180364 GGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGT-TGGCTTCTTGTTGTAG 22180422
Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || || | ||||||||| | ||| || | |||||||||| || ||||||
Sbjct 22180423 CGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCAAAGATGTCGTTGATGAAGGAGTTC 22180482
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| | ||| ||||||||| | ||||||||||||||||||||| ||||||
Sbjct 22180483 ATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTGAGGACCTTG 22180542
>seq2
Length=243061704
Score = 233 bits (258), Expect = 3e-55
Identities = 246/324 (76%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| |||||| |||||||| || ||||||
Sbjct 119860923 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCTCGCTTC 119860982
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| ||||||||| ||||||||||||||| ||| ||
Sbjct 119860983 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAC 119861042
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||||||| |||||||| || ||| ||| || ||||||| ||| |||||
Sbjct 119861043 GCGACGAGTCGCTCGGCGAAGCGCTCCCCGCCGTC------GATCCACCGCATGGCCCAG 119861096
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | || | ||| || |||||||||||||| || ||| |||||||||||
Sbjct 119861097 TCCGCCTTGCGGCGGACGGCGGGGACGGTGTCGATGGCGCGGAAAAGGCGGTCCTTCTCG 119861156
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
| ||| || ||| || |||| || |||||||| |||| ||||||||||| |||
Sbjct 119861157 GCGCCGTCGCGGATGTAAGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 119861216
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
||||||||||||||||| || |||
Sbjct 119861217 ATGGCGATCTGGAAGCCGTAGAAG 119861240
Score = 201 bits (222), Expect = 2e-45
Identities = 233/311 (75%), Gaps = 6/311 (2%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| |||||||||||||||| |||||||| | |||||||
Sbjct 119860617 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATGAGCTCCATC 119860676
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
|| ||| |||||||| | ||| ||| | |||||| || | | |||||||||
Sbjct 119860677 CAGTCGAAGGGGTTGGCGGCGTTGTACATCTTGTTGCACCCTAGTGCCATGAGCAGGCGG 119860736
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087
||||||||||| || ||||||| || |||||| ||| |||||||||||| |||||| |||
Sbjct 119860737 TCGGCGACGAACTCGATGTACTCGCTCATGAGCGCGCCGTTCATGCCGACGAGCGCGACG 119860796
Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTG 794147
|| |||| |||| ||| ||||| |||||| || ||||| ||| || ||||| |
Sbjct 119860797 GGGAGCGCGTCGCAGACGAACTCGCGCTCGATGTCCACGGCGTCGGCGACGATCT---CG 119860853
Query 794148 GGCACGTCGGA--CGACG-GCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204
| ||| ||| || || ||||| | ||| | | |||||| ||||| || ||||||
Sbjct 119860854 CGGACGCGGGACTCGTCGAGCTTGCTGCGGAGGAGCTCGTAGAGGAGGCACGCGAAGTCG 119860913
Query 794205 CAATGCAGACC 794215
|| ||||| ||
Sbjct 119860914 CAGTGCAGGCC 119860924
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 34863404 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 34863463
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| | || | ||| ||| |||||| ||
Sbjct 34863464 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTAGC 34863523
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 34863524 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 34863583
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | || ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 34863584 TGATGGACATGGCCTTAGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 34863642
Score = 158 bits (174), Expect = 2e-32
Identities = 175/233 (75%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208
|||||||| || || || || ||||||||| || |||||||| |||||||||
Sbjct 119861246 GGCCTCGGCGACCTGCACGTCGGACATGAAGCGCGACGCGAGGTTCTCGAGCACGATGCC 119861305
Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268
|||| ||||||||| ||||| |||||||| ||| ||||| |||||||| | |||
Sbjct 119861306 GTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAGATGAAGTGGCGCTCGTCAGGGGAGAG 119861365
Query 796269 CGA---GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325
|| | |||||||| | ||||||| ||||| ||||| ||||| ||||| |||||
Sbjct 119861366 GGACTCGTCCCAGTGGCGGGCGTCGGCGGACAGGTCCACCTCTTCGGCCGTCCAGAAGGA 119861425
Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
||| | ||||| ||||| | |||||| ||| | || |||| ||||||||||
Sbjct 119861426 CGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGAAGCGTATGGGGAACA 119861478
>seq2243
Length=444107
Score = 192 bits (212), Expect = 9e-43
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 413432 TGAACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 413373
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 413372 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 413313
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||||| | ||| |||| |||||||||| || |||||||
Sbjct 413312 GGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 413253
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| ||||||||||||||||||||||||
Sbjct 413252 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 413194
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 344560 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 344619
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||| |||| ||| ||||||||||||| | ||| ||| |||||| ||
Sbjct 344620 GGACAAGGCAGACGGAGGTTTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 344679
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| | || | ||||||||| | ||| |||| |||||||||| || | |||||
Sbjct 344680 GGGTGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGGGTTCA 344739
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| ||||||||||||||||||||||||
Sbjct 344740 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 344798
>seq6
Length=240577051
Score = 192 bits (212), Expect = 9e-43
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 224888176 TGAACTTGGTGACGGCCTTGGTTCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 224888117
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| |||| | ||| ||| |||||| ||
Sbjct 224888116 GGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 224888057
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||| || | |||||||| | ||| |||| |||||||||| || |||||||
Sbjct 224888056 GCGCAAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 224887997
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 224887996 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 224887938
Score = 188 bits (208), Expect = 1e-41
Identities = 185/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || || | |
Sbjct 21236906 TGAACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCGAGCTCCCCAGGGA 21236965
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 21236966 GGACAAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 21237025
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||||| | ||| |||| |||||||||| || |||||||
Sbjct 21237026 GGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 21237085
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||||||||||||||| ||||||
Sbjct 21237086 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTGAGGACCTTG 21237144
Score = 183 bits (202), Expect = 5e-40
Identities = 184/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||| |||||||||||||| ||||| || ||||||||| |||| || ||||| | |
Sbjct 34512351 TGAACTTTGTGACGGCCTTGGTGCCCTCGGAAACGGCGTGCTTGGCGAGCTCGCCAGGGA 34512292
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | |||||||||||| |||| ||| ||| |||||| ||
Sbjct 34512291 GGACGAGGCGCACCGAGGTCTGGATCTCCCGGGATGTGATGGTGGGCTTCTTGTTGTAGC 34512232
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||| |||||| ||||||| | ||| |||| |||||||||| ||||||||||
Sbjct 34512231 GCGCGAGGCGGGCGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAACGAGTTCA 34512172
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||| | || |||||| || | ||| ||||||||||||||||||||||||
Sbjct 34512171 TGATCGACATGGCCTTCGAGGAGATACCAATGTCCGGGTGCACCTGCTTGAGCACCTTG 34512113
Score = 179 bits (198), Expect = 6e-39
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 223501960 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 223502019
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| | || | ||| ||| |||||| ||
Sbjct 223502020 GGACAAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTAGC 223502079
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||| | ||| |||| |||||||||| || |||||||
Sbjct 223502080 GGGCTAGCTTGGCGGCCTCACCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 223502139
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 223502140 TGATGGACATGGCCTTGGAGGAGATGCCTATGTCGGGGTGGACCTGCTTGAGCACCTTG 223502198
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||| | |||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 92706811 TGAACTTGGTGCCAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 92706870
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||| | |||| |||||| |||||||||| | ||| ||| |||||| ||
Sbjct 92706871 GGACAAGGAGGACGGAGGTCTGAATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 92706930
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||||| | ||| |||| |||||||||| || |||||||
Sbjct 92706931 GGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 92706990
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||| ||||||||||||||||||||||||
Sbjct 92706991 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 92707049
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 224859320 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 224859379
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| | || | ||| ||| |||||| ||
Sbjct 224859380 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTAGC 224859439
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| || | |||||||||| || |||||||
Sbjct 224859440 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCAAAGATGTCGTTGATGAAGGAGTTCA 224859499
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| |||||||| |||||||||
Sbjct 224859500 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTAAGCACCTTG 224859558
Score = 96.9 bits (106), Expect = 5e-14
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 1249575 TCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACC 1249634
||||||| || ||||| |||| || ||||||||||||||||| |||||| || ||||
Sbjct 78607729 TCGCCTACCTCCACGCCATCGAGCCCCCCGTCGTCCACCGCGACGTCAAGACCAACAACA 78607788
Query 1249635 TGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATC 1249690
| || |||||| ||| | | | |||||||| |||||||| || ||| | ||| ||
Sbjct 78607789 TCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTCGGCCTCTCCCGCCTC 78607844
>seq5
Length=158699395
Score = 181 bits (200), Expect = 2e-39
Identities = 183/238 (77%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 144224627 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 144224568
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| |||| | ||| ||| |||||| ||
Sbjct 144224567 GGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 144224508
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | | | |||| |||||||||| || |||||||
Sbjct 144224507 GGGCGAGCTTGGCGGCCTCGCCGGCTAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 144224448
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||| ||||| | ||| ||||||||| | ||||||||| |||||||||||||||||
Sbjct 144224447 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTT 144224390
Score = 140 bits (154), Expect = 5e-27
Identities = 178/242 (74%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||| || |||||| ||| ||| ||| |||| || || ||| |
Sbjct 133278700 TGAACTTGGTGACAGCCTGGGAACCCTCGAAGATGGCATGCTTGGCAAGCTCCCCGTCGA 133278759
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | |||||||||||| |||| | ||| ||| |||||| ||
Sbjct 133278760 GGACGAGGCGCACAGAGGTCTGGATCTCACGGGAGGTGATGGTGGACTTCTTGTTGTAGC 133278819
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGT---CGATCATGTCGTTGACAAACGAGT 1485646
| || ||||| | || || ||| ||| | | ||| ||||| |||| |||||||
Sbjct 133278820 GGGCGAGGCGTGCAGCTTCC-TGC--ATGAGCTTCTCGAAGATGTCATTGATGAACGAGT 133278876
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||||| | ||| ||||||||||| || |||||||||||||| | |||||
Sbjct 133278877 TCATGATGGACATGGCCTTGGAGGAGATGCCCATCTCCGGGTGCACCTGCTTCAACACCT 133278936
Query 1485707 TG 1485708
||
Sbjct 133278937 TG 133278938
>seq4
Length=191835039
Score = 165 bits (182), Expect = 1e-34
Identities = 180/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| || || |||||||||||| |||| || |||||| | |
Sbjct 137509627 TGAACTTGGTGACGGCCTTGGTGCCTTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 137509568
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||| || | |||||||||||| |||| | ||| ||| |||||| |
Sbjct 137509567 GAACGAGGCGGACCGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 137509508
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||| || | | ||||| | ||| |||| |||||||||| || |||||||
Sbjct 137509507 GCGCGAGCTTGGCCGCCTCCGCCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 137509448
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 137509447 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 137509389
>seq1
Length=275477322
Score = 165 bits (182), Expect = 1e-34
Identities = 182/240 (76%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||| ||||||||||| || ||||| |||||||||||| |||| || |||||| | |
Sbjct 197371818 TGAACTTCGTGACGGCCTTAGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 197371759
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| || | |||||||||||||| | ||| ||| |||||| |
Sbjct 197371758 GGACGAGGCGGACCGAAGTCTGGATCTCGCGCGACGTGATGGTGGGCTTCTTGTTGTACC 197371699
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
| || ||||| | ||||| ||| ||| |||| |||||||||| || ||||||
Sbjct 197371698 GGGCGAGGCGCGCCGCCTCC-TGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 197371640
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||||||||| | ||| ||||||||| | ||| ||||||||||||||||||||||||
Sbjct 197371639 ATGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 197371580
Score = 145 bits (160), Expect = 1e-28
Identities = 179/241 (74%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 69866124 TGAACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCACCGGGGA 69866065
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||| || | |||||| ||||| |||| | ||| ||| |||||| |
Sbjct 69866064 GTACAAGGCGGACCGAGGTCTGTATCTCACGGGAGGTGATGGTGGGCTTCTTGTTGTACC 69866005
Query 1485590 GCGCCAGGCGGCCGGCCTCGGT-GCC-GATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
|||| || | | ||||| | ||| | | | |||| |||||||||| || |||||
Sbjct 69866004 GCGCGAGCTTGGCCGCCTCCGCCGCCAGCTTC--TCGAAGATGTCGTTGATGAAGGAGTT 69865947
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||| | ||| ||||||||| | ||| ||||| |||||||| ||||||||
Sbjct 69865946 CATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGGACCTGCTTCAGCACCTT 69865887
Query 1485708 G 1485708
|
Sbjct 69865886 G 69865886
Score = 104 bits (114), Expect = 4e-16
Identities = 103/129 (80%), Gaps = 7/129 (5%)
Strand=Plus/Minus
Query 1249559 TCGGCG--GCCACGGGCGTCGCCTATCTGCACGCGCTCG---ACCCGCCCGTCGTCCACC 1249613
|||||| |||| |||||||||||| ||||||| ||||| |||||||| |||||||||
Sbjct 268660257 TCGGCGCCGCCAAGGGCGTCGCCTACCTGCACGAGCTCGCCGACCCGCCCATCGTCCACC 268660198
Query 1249614 GCGATCTCAAGAGCAGCAACCTGCTGGTCGACGA-CGAGTACAATGTCAAGGTGGCCGAC 1249672
|||| ||||| ||||||| | ||| ||||||| || | ||| | |||||| |||||
Sbjct 268660197 GCGACATCAAGTCCAGCAACGTCCTGCTCGACGAGCGCCT-CAACGCCAAGGTCTCCGAC 268660139
Query 1249673 TTTGGTCTC 1249681
|| || |||
Sbjct 268660138 TTCGGCCTC 268660130
>seq7
Length=154015841
Score = 163 bits (180), Expect = 4e-34
Identities = 181/239 (76%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 45786755 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 45786696
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG-CTTGTTAGTG 1485588
|| ||||| |||| ||||||||||||| ||| | ||| || | || |||||| |
Sbjct 45786695 GGACGAGGCGTACGGAGGTCTGGATCTCGTGGGAGGTGATGGT-TGGCTTCTTGTTGTAG 45786637
Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || || | ||||||| | ||| |||| || ||||||| || ||||||
Sbjct 45786636 CGGGCGAGCTTGGCGGCCTCAACGGCGAGCTTCTCGAAGATATCGTTGATGAAGGAGTTC 45786577
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
| ||| ||||| | ||| |||||||| | ||| |||||||||||||||||||||||
Sbjct 45786576 ACGATGGACATGGCCTTGGAGGAGATGCTGATGTCCGGGTGCACCTGCTTGAGCACCTT 45786518
Score = 86.0 bits (94), Expect = 1e-10
Identities = 113/155 (73%), Gaps = 4/155 (3%)
Strand=Plus/Minus
Query 1433481 CAGGGCTTCCGCCCGACCAGCAGCGTCTCCTTTATGCGGGCCAGCAGATGGAAGACGGTC 1433540
|||| | ||||| ||||||||||| ||| ||| || || ||||| |||| ||||| |
Sbjct 32305059 CAGGCATCCCGCCGGACCAGCAGCGGCTCATTTTCGCCGGGAAGCAGCTGGACGACGGCC 32305000
Query 1433541 GCCGGCTGGCCGACTATGCCATCCGCGCCGAGGCGTCAATGCATCTGGTGCTCAGGCTAC 1433600
|| || |||||||| ||||| ||| || | |||| ||||||||| | || |
Sbjct 32304999 GCACCCTCGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCC 32304940
Query 1433601 GCGGCGGCG---GGGGCGGACCCCCCGCCA-GCGC 1433631
||||||||| ||||||| |||| ||| ||||
Sbjct 32304939 GCGGCGGCGGCCGGGGCGGCTACCCCACCATGCGC 32304905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914077529075771
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |