Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 2e-23
seq4 123 6e-23
seq5 111 4e-19
seq7 102 2e-16
seq2 102 2e-16
seq4399 89.7 1e-12
seq6 89.7 1e-12
seq1 89.7 1e-12
>seq3
Length=300915289
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| || || ||||| || || ||||| ||| | || ||||| ||||| |||
Sbjct 25197428 CAGATATTTGTGAAGACCCTCACCGGGAAGACGATAACTCTTGAGGTGGAGAGTTCAGAC 25197487
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || ||||| || || ||
Sbjct 25197488 ACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 25197547
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| || ||||||||| | || ||||| | ||| |||| || ||||| ||
Sbjct 25197548 AGGCTCATCTTTGCGGGAAAGCAGCTTGAGGATGGTCGTACTCTGGCAGACTACAATATC 25197607
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||||||||||||| | ||| || | ||||||
Sbjct 25197608 CAGAAGGAGTCTACTCTTCACTTGGTTCTGCGCCTTCGA 25197646
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| ||| || |||||||| || || ||||||||||| || || || || |||
Sbjct 25197200 CAGATATTTGTCAAGACTCTCACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCCGAC 25197259
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || || ||||| ||
Sbjct 25197260 ACTATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCTCCGGATCAGCAG 25197319
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| || || |||||| | || ||||| |||| |||| || || ||| ||
Sbjct 25197320 AGGCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGGACACTGGCTGACTATAACATC 25197379
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||||||
Sbjct 25197380 CAGAAGGAGTCCACCCTTCACCTTGT 25197405
Score = 120 bits (132), Expect = 7e-22
Identities = 131/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 206200 AAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATT 206259
|| || |||||| ||||||| || || |||||||| | || || ||| ||||||
Sbjct 25197683 AAGACTATCACTCTGGAAGTTGAGAGCTCTGACACCATTGACAATGTCAAGGCAAAGATC 25197742
Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319
|| || ||||| || || ||| ||| || |||| ||||| || ||||||||| |
Sbjct 25197743 CAGGACAAAGAGGGCATCCCGCCAGACCAGCAGCGACTCATCTTTGCTGGAAAGCAGCCG 25197802
Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||| | || ||||| |||||||| |||||||||||||||||||||||
Sbjct 25197803 GAGGACGGACGCACATTGGCTGATTACAATATCCAGAAAGAGTCTACTCTTCAC 25197856
Score = 96.9 bits (106), Expect = 8e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|||||| | || ||| | ||||||||||||||| ||||||| ||| ||||| |||| |||
Sbjct 25197646 TCGAAGGCGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCTGCCAGAGT 25197587
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||| || ||||||||||| || ||||| |||| || |||
Sbjct 25197586 ACGACCATCCTCAAGCTGCTTTCCCGCAAAGATGAGCCTCTGCTGA 25197541
Score = 89.7 bits (98), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828
||||||||||||||||||||||| ||| || |||||||| || | ||| || ||| ||||
Sbjct 25197856 GTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCCAATGTGCGTCCGTCCTCCGGCTG 25197797
Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||| || ||||| || || || ||
Sbjct 25197796 CTTTCCAGCAAAGATGAGTCGCTGCTG 25197770
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||||||||| || ||||| ||||||| ||||||||||||| |||| ||||| ||
Sbjct 25197405 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCCAGTGTCCGACCATCCTCA 25197346
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||| || || ||||| |||| || |||
Sbjct 25197345 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGA 25197313
Score = 86.0 bits (94), Expect = 1e-11
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| ||||| || || ||| ||||| |||| || |||
Sbjct 296745043 ACCGGCAAGACCATCACCTTGGAGGTCGAGTCTTCGGACACGATCGACAATGTGAAGGCT 296745102
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || || || |||||| || | || ||||||||||| |||
Sbjct 296745103 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAG 296745162
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || || || | || | || || |||||| ||||||| ||||| || || |||
Sbjct 296745163 CAGCTTGAGGAGGGCCGCACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCAC 296745222
Query 206374 CTTGT 206378
|||||
Sbjct 296745223 CTTGT 296745227
>seq4
Length=191835039
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| |||||||| || || || ||||||||||| ||||| ||| |||
Sbjct 68254692 CAGATTTTTGTCAAGACGCTCACCGGCAAGACCATCACTTTGGAGGTGGAGTCTTCAGAC 68254751
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || || |||||| ||
Sbjct 68254752 ACGATTGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 68254811
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| |||||| |||| ||||| |||| |||| ||||||||| |
Sbjct 68254812 CGCCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGGCGGACCCTGGCAGATTACAACATT 68254871
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || || || || ||||||||| || | || ||
Sbjct 68254872 CAGAAGGAATCCACCCTCCACCTTGTTCTGCGCCTCCG 68254909
Score = 102 bits (112), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || ||||| ||||| ||||| ||||| ||| | ||
Sbjct 68254476 AAGACCCTCACCGGCAAGACCATCACATTGGAGGTGGAGTCATCTGATACAATTGACAAT 68254535
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || ||||| || ||| |||||| || | || ||||||
Sbjct 68254536 GTGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCCCCGGACCAGCAGCGCCTCATCTTC 68254595
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| || || | ||| | ||||| |||||| ||||||| || ||
Sbjct 68254596 GCTGGCAAGCAGTTGGAGGACGGCCGCACTCTTGCCGACTACAACATCCAGAAGGAATCA 68254655
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 68254656 ACCCTGCACCTGGT 68254669
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| || || || ||||| ||||| || || ||||||
Sbjct 68254236 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCTGAC 68254295
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||| || || || || || ||| || ||| ||
Sbjct 68254296 ACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 68254355
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| |||| ||||| | ||| |||| || || || ||
Sbjct 68254356 CGCCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGGCGTACTCTGGCTGACTATAATATC 68254415
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || || |||||
Sbjct 68254416 CAGAAAGAGTCCACACTCCATCTTGT 68254441
Score = 89.7 bits (98), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||| || || || ||||||||||||| |||||||||||||| ||| | ||||| |||
Sbjct 68254441 ACAAGATGGAGTGTGGACTCTTTCTGGATATTATAGTCAGCCAGAGTACGCCCATCCTCC 68254382
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| || || ||||| || || || ||
Sbjct 68254381 AGCTGCTTGCCTGCAAAGATCAGGCGCTGCTG 68254350
>seq5
Length=158699395
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || ||||| || ||||| |||| || || ||| |||
Sbjct 71677156 CAGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCAGAC 71677097
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||||||||| || || || ||| || || ||
Sbjct 71677096 ACAATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCCCCAGATCAGCAG 71677037
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || ||||||||| | || ||||| | || || || ||||||||| |
Sbjct 71677036 CGTCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCTTAGCTGATTACAACATT 71676977
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||||||||| |||||||||||
Sbjct 71676976 CAGAAAGAGTCTACCCTTCACCTTGT 71676951
Score = 105 bits (116), Expect = 2e-17
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || |||||||| || || ||||| | ||||| || ||||||
Sbjct 71677384 CAGATCTTTGTCAAGACCCTCACAGGCAAGACTATCACCCTTGAAGTTGAGTCCTCTGAC 71677325
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || |||||||| |||||| || || ||||| || |||||| ||
Sbjct 71677324 ACGATTGACAATGTCAAAGCAAA-GATTCAGGACAAGGAAGGGATCCCTCCGGACCAGCA 71677266
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||| || || |||||| | || ||||| | || ||||| || |||||| |
Sbjct 71677265 GCGGTTGATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCTTGGCTGACTACAACAT 71677206
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || ||||||||
Sbjct 71677205 TCAGAAAGAGTCCACCCTACACCTTGT 71677179
Score = 105 bits (116), Expect = 2e-17
Identities = 139/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | ||||| || |||||||||| | ||
Sbjct 71681749 AAGACTCTGACTGGAAAGACCATCACACTTGAAGTTGAGTCTTCTGACACAATTGATAAT 71681690
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| |||||||| ||||||||| |||||||| || || ||| || | || |||||
Sbjct 71681689 GTGAAAGCAAA-GATTCAAGACAAAGAAGGCATCCCACCAGACCAGCAGCGCCTCATCTT 71681631
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| ||||||||| |||| ||||| ||||| | || || || ||| | ||||| |||||
Sbjct 71681630 CGCTGGAAAGCAGCTGGAGGATGGCCGGACTCTTGCTGACTATAACATTCAGAAGGAGTC 71681571
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 71681570 CACCCTCCAC 71681561
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || ||||| || ||||| |||| || || ||| |||
Sbjct 71681989 CAGATTTTTGTGAAGACCTTGACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCAGAC 71681930
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||||||||| || || || ||| || || ||
Sbjct 71681929 ACAATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCCCCAGATCAGCAG 71681870
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || ||||||||| | || ||||| | || || || || |||||| |
Sbjct 71681869 CGTCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCTTAGCTGACTACAACATT 71681810
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||||||||| |||||||||||
Sbjct 71681809 CAGAAAGAGTCTACCCTTCACCTTGT 71681784
Score = 105 bits (116), Expect = 2e-17
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || |||||||| || || ||||| | ||||| || ||||||
Sbjct 71682217 CAGATCTTTGTCAAGACCCTCACAGGCAAGACTATCACCCTTGAAGTTGAGTCCTCTGAC 71682158
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || |||||||| |||||| || || ||||| || |||||| ||
Sbjct 71682157 ACGATTGACAATGTCAAAGCAAA-GATTCAGGACAAGGAAGGGATCCCTCCGGACCAGCA 71682099
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||| || || |||||| | || ||||| | || ||||| || |||||| |
Sbjct 71682098 GCGGTTGATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCTTGGCTGACTACAACAT 71682039
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||||||||||| || || ||||||||
Sbjct 71682038 TCAGAAAGAGTCCACCCTACACCTTGT 71682012
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||||||||| ||||| ||||||
Sbjct 74944247 CAGATCTTTGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTGGAGTCGTCTGAC 74944306
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || |||||| ||
Sbjct 74944307 ACCATCGATAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 74944366
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| |||||| |||| ||||| | || |||| || |||||| |
Sbjct 74944367 CGTCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCTGACTACAACATT 74944426
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || ||||| ||||| ||
Sbjct 74944427 CAGAAGGAATCCACTCTCCACCTGGT 74944452
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||| ||||| ||||| || |||
Sbjct 71676700 CAGATCTTTGTGAAGACTCTGACGGGGAAGACCATCACCTTGGAGGTGGAGTCGTCAGAC 71676641
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| || || || || |||||| |||
Sbjct 71676640 ACCATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATCGCACCGGACCAGCAA 71676581
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| | || || || | || ||||| || |||||| |
Sbjct 71676580 CGCCTGATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGCACCTTGGCAGACTACAACATT 71676521
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||||||||||| || |||||||||
Sbjct 71676520 CAGAAAGAGTCTACGCTCCACCTTGTT 71676494
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| || || || |||||| | || || || ||||||
Sbjct 74944019 CAGATCTTTGTGAAGACCCTCACCGGCAAGACTATCACTCTTGAGGTCGAGTCCTCTGAC 74944078
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || || ||| ||
Sbjct 74944079 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 74944138
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || ||||| | || | || || |||||| ||
Sbjct 74944139 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCTGACTACAACATC 74944198
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||||||||||||
Sbjct 74944199 CAGAAGGAGTCGACTCTTCACCTTGT 74944224
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
||||||||||| |||||||||||||| | || |||||||| || || | ||||| ||
Sbjct 71681784 ACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCAGCTAAGGTGCGGCCATCCTCG 71681843
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||||||||| || ||||| || || || |||
Sbjct 71681844 AGCTGCTTTCCAGCAAAGATGAGACGCTGCTGA 71681876
>seq7
Length=154015841
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || || |||||| |||| ||||| || |||
Sbjct 60356623 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCGGAC 60356564
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | || || ||| ||||| || || || || || ||| || ||| ||
Sbjct 60356563 ACAATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAG 60356504
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || ||||||||||| ||||| | || | || ||||||||| ||
Sbjct 60356503 CGTCTCATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTTGCTGATTACAACATC 60356444
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|| || ||||| || |||||||| ||
Sbjct 60356443 CAAAAGGAGTCCACCCTTCACCTGGT 60356418
Score = 96.9 bits (106), Expect = 8e-15
Identities = 153/219 (70%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 206160 GGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGT 206219
||| |||||| ||||| || || || || || || || |||||||| | || ||
Sbjct 36806530 GGCCAAAATG---CAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTCGAGGT 36806586
Query 206220 GGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTT 206279
||| || ||||| |||| || ||| |||||||| || || || || ||
Sbjct 36806587 GGAGAGCAGCGACACCATCGACAATGTCAAGACTAAGATTCAGGATAAGGAGGGCATCCC 36806646
Query 206280 GCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGC 206339
||||||| || | || |||||||| || |||||| |||| || || | || | ||
Sbjct 36806647 GCCGGACCAGCAGTGCCTCATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTCGC 36806706
Query 206340 CGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| |||||| ||||||||||||| || || ||||| ||
Sbjct 36806707 CGACTACAACATCCAGAAAGAGTCGACGCTGCACCTGGT 36806745
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| ||||| || || ||||| ||||||| || ||||| |||| |||| | || |||
Sbjct 131554270 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTCCGCTCGTCCTCC 131554211
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| |||||||||||||||||||| ||
Sbjct 131554210 AGCTGCTTCCCGGCGAAGATAAGCCGTTGCTG 131554179
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||||| || || || |||||||| | || ||||| || |||
Sbjct 37435144 CAGATCTTTGTGAAGACGCTGACGGGGAAGACGATCACGCTCGAGGTGGAGAGCAGCGAC 37435085
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | | || ||| |||||||| || || || || || ||| ||| ||
Sbjct 37435084 ACCATTAACAACGTCAAGGTCAAGATTCAGGATAAGGAGGGCATCCCGCCAGACCAGCAG 37435025
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || || | || | ||||| |||||| ||
Sbjct 37435024 CGCCTCATCTTCGCCGGCAAGCAGCTAGAGGACGGCCGCACCCTCGCCGACTACAACATC 37434965
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 37434964 CAGAAGGAGTCGACGCTGCACCTGGT 37434939
>seq2
Length=243061704
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || |||||| |||| || || || ||||||
Sbjct 229073816 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTGGAGGTTGAGAGCTCTGAC 229073875
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || || |||||| ||
Sbjct 229073876 ACCATTGATAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 229073935
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| ||||| | ||| | || || |||||| ||
Sbjct 229073936 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTCGCGGACTACAACATC 229073995
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| |||||||| || ||||| ||
Sbjct 229073996 CAGAAGGAGTCTACCCTCCACCTGGT 229074021
Score = 87.8 bits (96), Expect = 4e-12
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT--CGAAT 206242
|| ||||| || || || |||||||| |||| ||||| || ||||| || ||||
Sbjct 44702135 AAGACGCTGACGGGCAAGACGATCACGCTGGAGGTGGAGGCGTCGGACACGGTGGCGAAC 44702076
Query 206243 CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
|| ||| ||| | || || || || || || ||||||| || | || ||||
Sbjct 44702075 --GTGAAGGCCAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGGCTCATCT 44702018
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
||||||| |||||| |||| || | | || |||| || |||||| ||||||| ||||
Sbjct 44702017 TCGCCGGGAAGCAGCTGGAGGACGAGCGCACGCTGGCAGACTACAACATCCAGAAGGAGT 44701958
Query 206363 CTACTCTTCACCTTGT 206378
| || || ||||| ||
Sbjct 44701957 CGACGCTGCACCTGGT 44701942
>seq4399
Length=1515107
Score = 89.7 bits (98), Expect = 1e-12
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814
|| || | ||| | ||||||||| ||||| ||||| | || |||||||||| || | |
Sbjct 1364609 AGCCTGAGAACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGCCAGTGTGCGT 1364550
Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||| ||||||||||| |||||||| || || || ||||||
Sbjct 1364549 CCATCCTCCAGCTGCTTGCCGGCGAATATCAGACGCTGTTGA 1364508
>seq6
Length=240577051
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| || ||||| ||||
Sbjct 108487207 AAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCGGACACCATCGACAAC 108487266
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||||||| || | || ||||||
Sbjct 108487267 GTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTCATCTTC 108487326
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | || | ||||| |||||| ||||||| |||||
Sbjct 108487327 GCCGGCAAGCAGCTCGAGGATGGCCGCACGCTAGCCGACTACAACATCCAGAAGGAGTCG 108487386
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 108487387 ACGCTGCACCTGGT 108487400
>seq1
Length=275477322
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| ||||| ||||| || ||||| ||||
Sbjct 247621645 AAGACCCTGACGGGGAAGACCATCACGTTGGAGGTGGAGTCCTCGGACACCATCGACAAC 247621586
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || ||||||| || | || ||||||
Sbjct 247621585 GTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTCATCTTC 247621526
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || | ||||| |||||| ||||||| |||||
Sbjct 247621525 GCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAACATCCAGAAGGAGTCC 247621466
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 247621465 ACCCTCCACCTGGT 247621452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181512068151269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |