Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq4 592 5e-165
seq1 590 2e-164
seq17829 571 2e-158
seq3 250 7e-62
seq6 152 2e-32
>seq4
Length=191835039
Score = 592 bits (656), Expect = 5e-165
Identities = 726/979 (74%), Gaps = 14/979 (1%)
Strand=Plus/Plus
Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570
|||||| | ||| ||| | ||||||||||| | |||||||| || |||||||
Sbjct 47963835 AACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATC 47963894
Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629
|| | || ||| || | || | || ||||| || ||||| || ||||| |||||
Sbjct 47963895 CC-TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 47963953
Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689
|| |||||||| || || || || || || ||| | |||||||||||||| || ||
Sbjct 47963954 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 47964013
Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 47964014 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 47964071
Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 47964072 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 47964131
Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 19867
|||||| | |||| | | ||| ||||| || |||||||||||||| | || ||
Sbjct 47964132 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 47964191
Query 19868 GGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTC 19927
|| ||| | ||||||||| |||||| || || ||||| |||||||| || |||| ||
Sbjct 47964192 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT- 47964250
Query 19928 TTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTC 19986
||||| | | || || ||||||| || || ||||| |||| ||||||||| || || ||
Sbjct 47964251 TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATC 47964310
Query 19987 GGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTT 20046
||||| ||||||| ||| | |||||||| || ||||| ||||| || ||||| || ||
Sbjct 47964311 TGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATT 47964370
Query 20047 CCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTC 20106
|||||| | ||||| |||||||||||||| || || ||||||||||| ||||| |||||
Sbjct 47964371 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTC 47964430
Query 20107 GCTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAG--AACTATGG 20163
| || || || | | ||| | | || || |||||| | || ||| | || | ||
Sbjct 47964431 CTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGA--GTCTGCTAATGAAGG 47964487
Query 20164 TTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGG 20223
|||||| ||||| |||||||||||||| |||||||| || || ||||||||||| |||||
Sbjct 47964488 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGG 47964547
Query 20224 ACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGC 20283
|| || ||||||||||| ||| ||||||||| |||||| ||||||||||| | ||
Sbjct 47964548 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 47964607
Query 20284 TGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAA 20343
||| ||||| || |||||||| |||||| |||| || || || ||| ||||| |||||
Sbjct 47964608 TGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAA 47964667
Query 20344 TCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATAC 20403
|| || || ||||| || ||||| ||| | | || | | ||||| || ||| ||||
Sbjct 47964668 CCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 47964727
Query 20404 TTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGC 20463
||||||||| || |||| ||||||||||| || | || || ||||| ||||| |||||
Sbjct 47964728 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 47964787
Query 20464 TCATAACTTCCCACTTGAC 20482
||||||||||| || |||
Sbjct 47964788 TCATAACTTCCTTCTAGAC 47964806
Score = 495 bits (548), Expect = 1e-135
Identities = 654/894 (73%), Gaps = 15/894 (2%)
Strand=Plus/Minus
Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657
|| ||||| | ||||| || ||||| ||||| || ||| |||| || || || || ||
Sbjct 76202889 TTTATTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTCGTGAGCCTGTC 76202830
Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAAT 19717
| ||| | |||||||||||||| || || || || || | |||| | |
Sbjct 76202829 T--GGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTACG 76202772
Query 19718 GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTAC 19777
|| |||||| | || || |||||||||||||||| | || ||||||||||| | |||
Sbjct 76202771 GCAATCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATGAATGGTTATAC 76202712
Query 19778 AACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGG--CATCTATGCTTACA 19835
|| || || || | || || | || | |||||| | |||| || || || ||| |
Sbjct 76202711 AATGGCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTGCAGCT-TG-TTATA 76202654
Query 19836 TGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCT 19895
|||| || |||||||||||||| | || || || ||| | ||||||||| |||||| |
Sbjct 76202653 TGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGTTGTTGCAT 76202594
Query 19896 ACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCT-ACCCGTTTGGTCAGGGT 19954
| || |||| ||||||| || |||| || ||||| | | | || ||||||| ||
Sbjct 76202593 ATTCAGCTCATGTTGCAGTTGCTACTGCTGT-TTTCTTGATTCATCCTATTGGTCAAGGA 76202535
Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTAC-ATGTTGGTATT 20013
|| ||||| |||| ||||| ||| || || || ||||| ||||||| ||| | |||||
Sbjct 76202534 AGTTTCTCTGATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTTATGATTGTATT 76202475
Query 20014 CCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATT 20073
|| | ||||| ||||| || ||||| || || |||||| | ||||| |||||||||||
Sbjct 76202474 TCAGGTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATT 76202415
Query 20074 CGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTG 20132
||| || || ||||||| ||| ||||| ||||| | || || || | | ||| | | |
Sbjct 76202414 CGGCGGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGCG 76202356
Query 20133 AGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGAC 20190
| || |||||| | || ||| | || | |||||||| ||||| ||||| ||||||||
Sbjct 76202355 AAACCACTGAAAATGA--GTCTGCTAATGAAGGTTACAAATTTGGTCAAGATGAAGAGAC 76202298
Query 20191 CTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTT 20250
|||||||| || || ||||||||||| ||||| | || ||||||||||| ||| |||
Sbjct 76202297 TTATAACATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATATGCTAGTTT 76202238
Query 20251 CAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310
|||||| |||||| ||||| ||||| | ||||| ||||| || ||||||| |||||
Sbjct 76202237 CAACAACTCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGGGATCTGGTT 76202178
Query 20311 CGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTC 20370
| |||| || || || || ||||| || || || || || ||||| || ||||| ||
Sbjct 76202177 CACTGCTTTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTTCAACCAATC 76202118
Query 20371 CCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAA 20430
| | | || | | |||| || ||| ||||||||||| | || |||| ||||||||
Sbjct 76202117 CGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAACCGTGCTAA 76202058
Query 20431 TCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCT 20484
||| || | || || ||||| ||||| |||||||| |||||||| || || ||
Sbjct 76202057 TCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGATCT 76202004
>seq1
Length=275477322
Score = 590 bits (654), Expect = 2e-164
Identities = 716/963 (74%), Gaps = 14/963 (1%)
Strand=Plus/Plus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||||||||||| | |||||||| || ||||||| || | || ||| || |
Sbjct 183993047 AACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 183993105
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|| | || ||||| || ||||| || ||||| ||||| || |||||||| || || ||
Sbjct 183993106 TTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 183993165
Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710
|| || || ||| | |||||||||||||| || || || || || | |||| |
Sbjct 183993166 GCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTAC 183993225
Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768
| || || |||||| | || || |||||||||||||||||| || ||||||||
Sbjct 183993226 TTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAA 183993283
Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828
||| | ||||| || || || | | || | || | |||||| | |||| | |
Sbjct 183993284 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 183993343
Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888
||| ||||| || |||||||||||||| | || || || ||| | ||||||||| |
Sbjct 183993344 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 183993403
Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947
||||| || || ||||| |||||||| || |||| || ||||| | | || || ||||
Sbjct 183993404 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTATCCTATTGG 183993462
Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007
||| || || ||||| |||| ||||||||| || || || ||||| ||||||| ||| |
Sbjct 183993463 TCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 183993522
Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067
|||||||| || ||||| ||||| || ||||| || || |||||| | ||||| |||||
Sbjct 183993523 TGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGG 183993582
Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGT 20127
||||||||| || || ||||||||||| ||||| ||||| | || || || | | |||
Sbjct 183993583 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGA 183993641
Query 20128 GC-GTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGA 20184
| | || || |||||| | || ||| | || | |||||||| ||||| ||||||||
Sbjct 183993642 TCAGGGAAACCACTGAAAATGA--GTCTGCTAATGAAGGTTACAAATTTGGTCAAGAAGA 183993699
Query 20185 AGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGC 20244
|||||| |||||||| || || ||||||||||| ||||| || || ||||||||||| ||
Sbjct 183993700 AGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGC 183993759
Query 20245 TTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGAT 20304
| ||||||||| |||||| ||||||||||| | ||||| ||||| || ||||||||
Sbjct 183993760 TAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAGGGAT 183993819
Query 20305 TTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAA 20364
|||||| |||| || || || ||| ||||| ||||| || || || ||||| || ||
Sbjct 183993820 CTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATTTCAA 183993879
Query 20365 CCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCG 20424
||| ||| | | || | | ||||| || ||| ||||||||||||| || |||| ||
Sbjct 183993880 CCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 183993939
Query 20425 TGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCT 20484
||||||||| || | || || ||||| ||||| ||||||||||||||||| || || ||
Sbjct 183993940 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCT 183993999
Query 20485 TGC 20487
||
Sbjct 183994000 AGC 183994002
Score = 185 bits (204), Expect = 3e-42
Identities = 297/422 (70%), Gaps = 6/422 (1%)
Strand=Plus/Minus
Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657
|| ||||| | ||||| || ||||| | ||| || |||||||| || | || | ||
Sbjct 150871579 TTTATTATCACCTTCATCGCTGCTCCTCTAGTAGATATTGATGGTATTTGTGAGCTTGTT 150871520
Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCA 19715
|| ||| | |||||||||||||| || || | || || | |||| | | ||
Sbjct 150871519 TCTGGTTCTTTACTTTATGGAAACAATATTATTTTTGGTGCTATTATTCCTACTTCTGCG 150871460
Query 19716 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCT 19775
|| |||||| | || || |||||||||||||||||| || ||||||||||| | |
Sbjct 150871459 --GCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTATTGATGAATGGTTAT 150871402
Query 19776 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACA 19835
|||| || || || | | || | || |||||| | |||| | | ||| |
Sbjct 150871401 ACAATGGTGGTCCTTATGAGCTAATTGTTCCACACTTCTTACTTGGTGTAGCTTGTTATA 150871342
Query 19836 TGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCT 19895
|||| || |||||||||||||| | || || || ||| | ||||||||| |||||| |
Sbjct 150871341 TGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCAT 150871282
Query 19896 ACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGT 19954
| || ||| | |||| ||| || || | || ||||| | | || || ||||||| ||
Sbjct 150871281 ATTCAGCTGCTGTTGTAGCTGCTACTACTGT-TTTCTTGATTTATCCTATTGGTCAAGGA 150871223
Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014
|| ||||| ||| ||||||||| || || || ||||| ||||||| ||| | ||||||
Sbjct 150871222 AGTTTCTCTAATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTC 150871163
Query 20015 CA 20016
||
Sbjct 150871162 CA 150871161
>seq17829
Length=1032
Score = 571 bits (632), Expect = 2e-158
Identities = 706/956 (74%), Gaps = 10/956 (1%)
Strand=Plus/Plus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||||||||||| |||| |||||||| ||||||| || | || ||| || |
Sbjct 52 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 110
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || ||||| || |||||||| || || ||||| || |||||||| || || ||
Sbjct 111 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 170
Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710
|| || || || || |||||||||||||| || || || || ||| | |||| |
Sbjct 171 GCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 230
Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768
| || || || || | ||||| || ||||| ||||||||| || ||||||||
Sbjct 231 TTCTGCG--GCTATTGGTTTGCACTTTTATCCAATATGGGAAGCTGCATCCGTTGATGAA 288
Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828
||| | ||||| || || || | |||| | || | |||||| | |||| | |
Sbjct 289 TGGTTATACAATGGCGGTCCATATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 348
Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888
||||||||| || |||||||||||||| | ||| || || ||| | ||||||||| |
Sbjct 349 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 408
Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947
||||| || || ||||| |||||||| || |||| || ||||| | ||||||| | ||
Sbjct 409 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATAGG 467
Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007
||| || || || || |||| ||||||| | || || || ||||| ||||||| ||| |
Sbjct 468 TCAAGGAAGTTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATGAT 527
Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067
||||| || || || ||||| ||||| |||||||| || |||||| | ||||| |||||
Sbjct 528 TGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 587
Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG- 20126
||||||||| || || ||||||||||| ||||||||||| |||| || | || | |||
Sbjct 588 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTC-CTTGGTAACTTCTAGTTTGA 646
Query 20127 TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAG 20186
| | || || || ||| | ||| | || | ||||||| || || ||||| ||||
Sbjct 647 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 706
Query 20187 AGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTT 20246
| |||||||| || ||||| ||||||||||| ||||| || |||||||||||||| ||
Sbjct 707 AAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCGA 766
Query 20247 CTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTT 20306
|||||||||| |||||| |||| ||||| || ||||| ||||| || ||||| || |
Sbjct 767 GTTTCAACAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCT 826
Query 20307 GGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACC 20366
|||| | || || || | || ||||| || ||| | || |||||||| |||||||
Sbjct 827 GGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACC 886
Query 20367 AGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTG 20426
| ||| | | || | | |||||||| ||| |||| |||||||| ||| | || ||||
Sbjct 887 AATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTG 946
Query 20427 CTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGAC 20482
|||| || || | || || ||||||||||| ||||||||||| ||||| || |||
Sbjct 947 CTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGAC 1002
>seq3
Length=300915289
Score = 250 bits (276), Expect = 7e-62
Identities = 299/401 (75%), Gaps = 9/401 (2%)
Strand=Plus/Minus
Query 20063 GCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 20122
|||||||||||||| || || ||||||||||| ||||| ||||| | || || || | |
Sbjct 227134286 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAG 227134228
Query 20123 CTTGTGC-GTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAA 20179
||| | | || || |||||| | || ||| | || | |||||||| ||||| |||
Sbjct 227134227 TTTGATCAGGGAAACCACTGAAAATGA--GTCTGCTAATGAAGGTTACAAATTTGGTCAA 227134170
Query 20180 GAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAA 20239
||||||||||| |||||||| || || ||||||||||| ||||| | || |||||||||
Sbjct 227134169 GAAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAA 227134110
Query 20240 TACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTA 20299
|| ||| ||||||||| |||||| ||||||||| | ||||| ||||| || |||
Sbjct 227134109 TATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCT---TGGCTGCTTGGCCTGTCGTA 227134053
Query 20300 GGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAAC 20359
||||| |||||| || | || || || ||| |||| || || || || || |||||
Sbjct 227134052 GGGATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAAT 227133993
Query 20360 TTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTC 20419
|| ||||| ||| | | || | | |||| || ||| ||||||||||||| || ||
Sbjct 227133992 TTCAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATC 227133933
Query 20420 AATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAA 20460
|| ||||||||||| || | || || || || | ||| ||
Sbjct 227133932 AACCGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892
Score = 217 bits (240), Expect = 4e-52
Identities = 215/278 (77%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221
|||||||| ||||| || ||||||||||| ||||| || || || ||||| ||||| |||
Sbjct 48259806 GGTTACAAATTTGGTCAGGAAGAAGAGACTTATAATATTGTGGCTGCTCACGGTTATTTT 48259865
Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTT 20281
|| || || ||||||||||| ||| ||||||||| |||||| ||||||||||| |
Sbjct 48259866 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 48259925
Query 20282 GCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTT 20341
||||| ||||| || |||||||| |||||| |||| || || || ||| ||||| ||
Sbjct 48259926 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 48259985
Query 20342 AATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGAT 20401
|| || || |||||||| || ||||| || | | || | | ||| | || ||| ||
Sbjct 48259986 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTTGCGTTATTAAT 48260045
Query 20402 ACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTT 20439
||||||||||| || |||| ||||||||||| || ||
Sbjct 48260046 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTTT 48260083
Score = 196 bits (216), Expect = 1e-45
Identities = 193/247 (78%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 19831 TTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGT 19890
||| ||||| || |||||||||||||| | || || || ||| | ||||||||| |||
Sbjct 228897976 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 228897917
Query 19891 TGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTC 19949
||| || || ||||| |||||||| | |||| || ||||| | | || || ||||||
Sbjct 228897916 TGCATATTCAGCTCCTGTTGCAGCTACTACTGCTGT-TTTCTTGATTTATCCTATTGGTC 228897858
Query 19950 AGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGG 20009
| || || ||||| |||| ||||||||| || || || ||||| ||||||| ||| | |
Sbjct 228897857 AAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTG 228897798
Query 20010 TATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTG 20069
||||||| || ||||| ||||| || ||||| || || |||||| | ||||| |||||||
Sbjct 228897797 TATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTG 228897738
Query 20070 TATTCGG 20076
|||||||
Sbjct 228897737 TATTCGG 228897731
>seq6
Length=240577051
Score = 152 bits (168), Expect = 2e-32
Identities = 270/389 (69%), Gaps = 6/389 (2%)
Strand=Plus/Plus
Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570
|||||| | ||| || | ||||||||||| | |||||||| || |||||||
Sbjct 76928917 AACTGGATAACTAGCACTGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATC 76928976
Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629
|| | || ||| || | || | || ||||| || ||||| || ||||| |||||
Sbjct 76928977 CC-TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 76929035
Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689
|| |||||||| || || || || || || ||| | |||||||||||||| || ||
Sbjct 76929036 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 76929095
Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 76929096 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 76929153
Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 76929154 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 76929213
Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 19867
|||||| | |||| | | ||| ||||| || |||||||||||||| | || ||
Sbjct 76929214 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 76929273
Query 19868 GGAATGAGGCCTTGGATTTGTGTTGCCTA 19896
|| ||| | ||||||||| |||||| ||
Sbjct 76929274 GGTATGCGCCCTTGGATTGTTGTTGCATA 76929302
Score = 120 bits (132), Expect = 9e-23
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 20329 TACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGG 20388
||| ||||| ||||| || || || ||||| || ||||| ||| | | || | | ||
Sbjct 71012678 TACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGG 71012619
Query 20389 TCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGAT 20448
||| || ||| ||||||||||||| || |||| ||||||||||| || | || || ||
Sbjct 71012618 TCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAAT 71012559
Query 20449 GCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
||| ||||| ||||||||||||||||| || || || ||
Sbjct 71012558 GCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGC 71012520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148792765663962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |