Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq17829 648 0.0
seq4 630 2e-176
seq1 625 9e-175
seq3 253 6e-63
seq6 206 8e-49
>seq17829
Length=1032
Score = 648 bits (718), Expect = 0.0
Identities = 743/989 (75%), Gaps = 10/989 (1%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||||||||| || || |||||||| ||
Sbjct 25 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 84
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| | || ||| | ||| || ||||| || ||||||||||| |
Sbjct 85 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 142
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| |||||||| || || ||||||||| | || ||| |||||||||||||
Sbjct 143 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 202
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || || ||| | |||| | | || || || || | ||||| || ||
Sbjct 203 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATTGGTTTGCACTTTTATCC 260
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
||| ||||||||| || ||||||||||| | ||||| || || || | |||| |
Sbjct 261 AATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGCGGTCCATATGAACTAAT 320
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079
|| | |||||| | |||| || | ||||||||| || |||||||||||||| |
Sbjct 321 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 380
Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139
||| || || ||||||||||||||| |||||| || |||||||||||||| || || |
Sbjct 381 TCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 440
Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199
||| || ||| | |||| ||| | |||||||| ||| || | ||||||| | ||
Sbjct 441 TGCTGTTTTCTTGATCTACCCAATAGGTCAAGGAAGTTTTTCAGATGGTATGCCTCTAGG 500
Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259
||| |||||| ||||||| ||| ||||||| |||||||| ||||| || || |||||
Sbjct 501 AATTTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 560
Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
||| || |||||| | ||||| |||||||| |||||||| || ||||| ||||| |||||
Sbjct 561 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 620
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
|||||| |||| || | || | ||| | | ||||| || ||| | | |||| ||
Sbjct 621 CGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 679
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| || |||| || || ||||| ||||| || ||||| ||||| ||||||||||| ||||
Sbjct 680 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATT 739
Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498
|||| || | || ||||| || || ||||||||| |||||| |||||||||||
Sbjct 740 TTGGCCGATTGATCTTCCAATATGCGAGTTTCAACAATTCTCGTTCTTTACATTTCTTTC 799
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558
| |||||||||||||| || || || |||||| |||| | || | ||||| ||||| |
Sbjct 800 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTT 859
Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618
|||| || ||||| || || |||||||| ||| | |||| | | |||||||| |||
Sbjct 860 TCAATTTAAATGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTA 919
Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678
|||| |||||||| ||| | || ||||||||||| || | || || ||||| |||||||
Sbjct 920 ATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 979
Query 19679 ATGCTCATAACTTCCCACTTGATTTGGCT 19707
|||||||||| ||||| || || || |||
Sbjct 980 ATGCTCATAATTTCCCTCTAGACTTAGCT 1008
>seq4
Length=191835039
Score = 630 bits (698), Expect = 2e-176
Identities = 729/971 (75%), Gaps = 16/971 (2%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| |||| || || || ||||||||||| ||||| ||||| || ||||||| |
Sbjct 47963836 ACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCC 47963895
Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848
| | || ||| | || ||| | || || ||||| |||||||| ||||| ||||| ||
Sbjct 47963896 C-TACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 47963953
Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908
||| |||||||| || || ||||||||| | || | | |||||||||||||| || ||
Sbjct 47963954 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 47964013
Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 47964014 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 47964071
Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 47964072 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 47964131
Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086
|||||| | |||| || | ||| ||||| || |||||||||||||| | || ||
Sbjct 47964132 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 47964191
Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146
|| ||||||||||||||| |||||| || |||||||||||||| || || |||| ||
Sbjct 47964192 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 47964251
Query 19147 TTCCTTGTCTATCCATTTGGTCAAG---GTTCCTTTAGCGACGCTATGCCTTTGGGTATT 19203
||| | | ||||| ||||||||| ||| || | || | ||||||||| || ||
Sbjct 47964252 TTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGAATA 47964308
Query 19204 AGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCG 19263
|||||| ||||||| ||| ||||||||||||| ||||| |||||||| ||||| ||
Sbjct 47964309 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCA 47964368
Query 19264 TTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGT 19323
|| |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| |||
Sbjct 47964369 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 47964428
Query 19324 TCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGG 19382
|| |||| || || | ||| | | ||||| |||||| | | ||| || | ||
Sbjct 47964429 TC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGG 47964487
Query 19383 CTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGG 19442
||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 47964488 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGG 47964547
Query 19443 TCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGC 19502
||| | || ||||| || || |||||||| |||||| |||| ||||| |||||
Sbjct 47964548 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 47964607
Query 19503 TGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAA 19562
|||||||||||| || || || ||||| | || | || | || || |||||||| ||
Sbjct 47964608 TGCTTGGCCTGTCGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAA 47964667
Query 19563 CTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATAC 19622
| | ||||| || || || ||||| ||| | |||| | | ||||| || ||| ||||
Sbjct 47964668 CCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 47964727
Query 19623 TTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGC 19682
||||||||| || |||| |||||||| || || | || ||||||||||||||||||||
Sbjct 47964728 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 47964787
Query 19683 TCATAACTTCC 19693
|||||||||||
Sbjct 47964788 TCATAACTTCC 47964798
Score = 526 bits (582), Expect = 6e-145
Identities = 700/961 (73%), Gaps = 15/961 (2%)
Strand=Plus/Minus
Query 18748 GATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTG-CAGC 18806
|| ||||||||||| ||||| ||||| ||||||| || | || ||| | ||
Sbjct 76202958 GAAAACCGTCTTTACATCGGGTGGTTCAATGTTTTGATGATCCC-TACCTTATTGACCGC 76202900
Query 18807 TACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCC 18865
||| | || || ||||| ||||||| ||||| ||||| ||||| ||| |||| || |
Sbjct 76202899 AACT-TCCGTATTTATTATCACCTTCATCGCTGCTCCTCCAGTAGATATTTATGGTATTC 76202841
Query 18866 GCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTC 18925
| |||||||| | || | | |||||||||||||| || || || || || | |||
Sbjct 76202840 GTGAGCCTGT--CTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTC 76202783
Query 18926 CGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATG 18985
| | | || |||||| | || || |||||||||||||||| | || ||||||
Sbjct 76202782 CTACTTCTACGGCAATCGGATTGCATTTTTACCCAATTTGGGAAGTTGCATCTGTTGATG 76202723
Query 18986 AATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCT 19045
||||| | ||||| || || || | || || | || | |||||| | |||| |
Sbjct 76202722 AATGGTTATACAATGGCGGTCCTTATCAGCTAATTGTTCTACACTTCTTACTTGGTGCAG 76202663
Query 19046 ATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTT 19105
| ||| ||||| || |||||||||||||| | || || || |||||||||||||||
Sbjct 76202662 CTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 76202603
Query 19106 GTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTG 19165
|||||| || ||||||| |||||| | || |||| || ||| | | |||| |||
Sbjct 76202602 TTGTTGCATATTCAGCTCATGTTGCAGTTGCTACTGCTGTTTTCTTGATTCATCCTATTG 76202543
Query 19166 GTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTAC- 19221
||||||| || || | || | ||||| ||| || || |||||| |||||||
Sbjct 76202542 GTCAAGGAAGTTTCTCT---GATGGTATGCATTTTGGAATATCTGGTACTTTCAACTTTT 76202486
Query 19222 ATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTC 19281
||| ||||||| |||| ||||| |||||||| ||||| || || |||||| | |||||
Sbjct 76202485 ATGATTGTATTTCAGGTAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTA 76202426
Query 19282 GCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 19341
|||||||| |||||||| || ||||| | ||| ||||| ||||| | || || || | |
Sbjct 76202425 GCTGGTGTATTCGGCGGTTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTC-TAG 76202367
Query 19342 CTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGA 19400
||| | | ||||| |||||| | | ||| || | || ||||| ||||| |||||
Sbjct 76202366 TTTGATCAGCGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAGA 76202307
Query 19401 AGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTA 19460
|||||||||||||||||||| ||||||||||| |||||||||| | || ||||| ||
Sbjct 76202306 TGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCAATTAATCTTCCAATA 76202247
Query 19461 CGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGG 19520
|| |||||||| |||||| |||| |||| ||||||||||||||||| | ||
Sbjct 76202246 TGCTAGTTTCAACAACTCTCGTTCTTTACACATCTTCTTGGCTGCTTGGCCTGTCATAGG 76202187
Query 19521 CATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTT 19580
|| ||||| | || | || | || | |||||||||||| | ||||| || || ||
Sbjct 76202186 GATCTGGTTCACTGCTTTAGGTATTAGTAATATGGCATTCAACCTAAATGGATTCAATTT 76202127
Query 19581 TAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 19640
||||| ||| | |||| | | |||| || ||| ||||||||||| | || ||||
Sbjct 76202126 CAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTAATATCATCAA 76202067
Query 19641 TCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
|||||||| || || | || ||||||||||||||||||||||| |||||||| || ||
Sbjct 76202066 CCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 76202007
Query 19701 T 19701
|
Sbjct 76202006 T 76202006
>seq1
Length=275477322
Score = 625 bits (692), Expect = 9e-175
Identities = 726/968 (75%), Gaps = 16/968 (2%)
Strand=Plus/Plus
Query 18748 GATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTG-CAGC 18806
|| ||||||||||| ||||| ||||| || ||||||| || | || ||| | ||
Sbjct 183993044 GAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCCC-TACCTTATTGACCGC 183993102
Query 18807 TACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCATCC 18865
||| | || || ||||| |||||||| ||||| ||||| ||||| |||||||| || |
Sbjct 183993103 AACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTC 183993161
Query 18866 GCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTC 18925
| ||||||||| | || | | |||||||||||||| || || || || || | |||
Sbjct 183993162 GTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTC 183993221
Query 18926 CGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGA 18983
| | | || || |||||| | || || |||||||||||||||||| || ||||
Sbjct 183993222 CTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 183993279
Query 18984 TGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT 19043
||||||| | ||||| || || || | | || | || | |||||| | |||| ||
Sbjct 183993280 TGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 183993339
Query 19044 CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGAT 19103
| ||| ||||| || |||||||||||||| | || || || ||||||||||||||
Sbjct 183993340 AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT 183993399
Query 19104 TTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATT 19163
| |||||| || |||||||||||||| || || |||| || ||| | | ||||| |
Sbjct 183993400 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTAT 183993459
Query 19164 TGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTA 19220
||||||||| || || | || | ||||||||| || || |||||| |||||||
Sbjct 183993460 TGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTT 183993516
Query 19221 CATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGT 19280
||| ||||||||||||| ||||| |||||||| ||||| || || |||||| | |||||
Sbjct 183993517 TATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGT 183993576
Query 19281 CGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTC 19340
|||||||| |||||||| || ||||| ||||| ||||| ||||| | || || || |
Sbjct 183993577 AGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TA 183993635
Query 19341 GCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAG 19399
| ||| | | ||||| |||||| | | ||| || | || ||||| ||||| ||||
Sbjct 183993636 GTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAG 183993695
Query 19400 AAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGT 19459
|||||||||||||||||||||| ||||||||||| ||||||||||| | || ||||| |
Sbjct 183993696 AAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTCGATTAATCTTCCAAT 183993755
Query 19460 ACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTG 19519
| || |||||||| |||||| |||| ||||| ||||||||||||||||| || |
Sbjct 183993756 ATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTCGTAG 183993815
Query 19520 GCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACT 19579
| || ||||| | || | || | || || |||||||| ||| | ||||| || || |
Sbjct 183993816 GGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTTAACCTAAATGGATTCAATT 183993875
Query 19580 TTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCA 19639
| ||||| ||| | |||| | | ||||| || ||| ||||||||||||| || |||
Sbjct 183993876 TCAACCAATCCGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCA 183993935
Query 19640 ATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTG 19699
| |||||||| || || | || |||||||||||||||||||||||||||||||| || |
Sbjct 183993936 ACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCATAACTTCCCTCTAG 183993995
Query 19700 ATTTGGCT 19707
|| | |||
Sbjct 183993996 ATCTAGCT 183994003
Score = 224 bits (248), Expect = 3e-54
Identities = 362/512 (71%), Gaps = 14/512 (3%)
Strand=Plus/Minus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||| | |||| || || || |||| |||||| ||||| ||||| || ||| ||| |
Sbjct 150871665 ACTAGATAACTAGCACCGAAAACCATCTTTACATCGGGTGGTTCGGTGTTTTGACGATCC 150871606
Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848
| | || ||| | || ||| | || || ||||| ||||||| ||||| |||| ||
Sbjct 150871605 C-TACCTTATTGACCGCAACT-TCCGTATTTATTATCACCTTCATCGCTGCTCCTCTAGT 150871548
Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908
||| |||||||| || | |||| |||| | || | | |||||||||||||| || ||
Sbjct 150871547 AGATATTGATGGTATTTGTGAGCTTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 150871488
Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966
| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 150871487 TTTTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 150871430
Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026
|||||| || ||||||||||| | ||||| || || || | | || | ||
Sbjct 150871429 GAAGCTGCATCTATTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCCA 150871370
Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086
|||||| | |||| || | ||| ||||| || |||||||||||||| | || ||
Sbjct 150871369 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 150871310
Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146
|| ||||||||||||||| |||||| || |||||| |||||| || || || | ||
Sbjct 150871309 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTGCTGTTGTAGCTGCTACTACTGTT 150871250
Query 19147 TTCCTTGTCTATCCATTTGGTCAAG---GTTCCTTTAGCGACGCTATGCCTTTGGGTATT 19203
||| | | ||||| ||||||||| ||| || || | | ||||||||| || ||
Sbjct 150871249 TTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTA---ATGGTATGCCTTTAGGAATA 150871193
Query 19204 AGTGGTACGTTCAACTACATGCTTGTATTCCA 19235
|||||| ||||||| ||| ||||||||||
Sbjct 150871192 TCTGGTACTTTCAACTTTATGATTGTATTCCA 150871161
>seq3
Length=300915289
Score = 253 bits (280), Expect = 6e-63
Identities = 298/400 (75%), Gaps = 5/400 (1%)
Strand=Plus/Minus
Query 19281 CGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTC 19340
||||||||| |||||||| || ||||| ||||| ||||| ||||| | || || || |
Sbjct 227134287 CGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TA 227134229
Query 19341 GCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAG 19399
| ||| | | ||||| |||||| | | ||| || | || ||||| ||||| ||||
Sbjct 227134228 GTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAAATTTGGTCAAG 227134169
Query 19400 AAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGT 19459
|||||||||||||||||||||| ||||||||||| ||||||||| | | || ||||| |
Sbjct 227134168 AAGAAGAGACTTATAACATTGTGGCTGCTCATGGTTATTTTGGTTGATTAATCTTCCAAT 227134109
Query 19460 ACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTG 19519
| || |||||||| |||||| |||| ||||| ||||||||||||||| || |
Sbjct 227134108 ATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTT---GGCTGCTTGGCCTGTCGTAG 227134052
Query 19520 GCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACT 19579
| || ||||| | | | || | || || ||||||||||| | ||||| || || |
Sbjct 227134051 GGATCTGGTTCACTACTTTAGGTATTAGTACTGTGGCATTCAACCTAAATGGATTCAATT 227133992
Query 19580 TTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCA 19639
| ||||| ||| | |||| | | |||| || ||| ||||||||||||| || |||
Sbjct 227133991 TCAACCAATCCGTAGTTGATAGTCAAGGTCACGTTATTAATACTTGGGCTGATATCATCA 227133932
Query 19640 ATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679
| |||||||| || || | || ||||| |||| ||||||
Sbjct 227133931 ACCGTGCTAATCTTGGTATGGAAGTAATACACGGACGTAA 227133892
Score = 205 bits (226), Expect = 3e-48
Identities = 230/308 (75%), Gaps = 0/308 (0%)
Strand=Plus/Plus
Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410
||||| |||||| | | ||| || | || ||||| ||||| || ||||||||||||
Sbjct 48259776 GAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAGGAAGAAGAGACT 48259835
Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470
||||| ||||| |||||||| || ||||||||||| | || ||||| || || |||
Sbjct 48259836 TATAATATTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTC 48259895
Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530
||||| |||||| |||| ||||| ||||||||||||||||| || || || |||||
Sbjct 48259896 AACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTC 48259955
Query 19531 GCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCC 19590
| || | || | || || |||||||||||| | ||||| || || || ||||| ||
Sbjct 48259956 ACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCT 48260015
Query 19591 CTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAAC 19650
| |||| | | ||| | || ||| ||||||||||||| || |||| ||||||||
Sbjct 48260016 GTAGTTGATAGTCAAGGTTGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAAT 48260075
Query 19651 CTCGGCTT 19658
|| || ||
Sbjct 48260076 CTTGGTTT 48260083
Score = 203 bits (224), Expect = 9e-48
Identities = 210/274 (77%), Gaps = 6/274 (2%)
Strand=Plus/Minus
Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086
|||||| | |||| || | ||| ||||| || |||||||||||||| | || ||
Sbjct 228897999 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 228897940
Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146
|| ||||||||||||||| |||||| || |||||||||||||| || | |||| ||
Sbjct 228897939 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTACTACTGCTGTT 228897880
Query 19147 TTCCTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTTTGGGTATT 19203
||| | | ||||| |||||||||| || || | || | ||||||||| || ||
Sbjct 228897879 TTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTTTAGGAATA 228897823
Query 19204 AGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCG 19263
|||||| ||||||| ||| ||||||||||||| ||||| |||||||| ||||| ||
Sbjct 228897822 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAACACAACATCCTTATGCATCCA 228897763
Query 19264 TTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCG 19297
|| |||||| | ||||| |||||||| |||||||
Sbjct 228897762 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCG 228897729
>seq6
Length=240577051
Score = 206 bits (228), Expect = 8e-49
Identities = 287/395 (73%), Gaps = 8/395 (2%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| |||| || || || ||||||||||| ||||| ||||| || ||||||| |
Sbjct 76928918 ACTGGATAACTAGCACTGAAAACCGTCTTTACATCGGGTGGTTCGGTGTTTTGATGATCC 76928977
Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848
| | || ||| | || ||| | || || ||||| |||||||| ||||| ||||| ||
Sbjct 76928978 C-TACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 76929035
Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908
||| |||||||| || || ||||||||| | || | | |||||||||||||| || ||
Sbjct 76929036 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 76929095
Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 76929096 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 76929153
Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 76929154 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 76929213
Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086
|||||| | |||| || | ||| ||||| || |||||||||||||| | || ||
Sbjct 76929214 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 76929273
Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGC 19121
|| ||||||||||||||| |||||| || | |||
Sbjct 76929274 GGTATGCGCCCTTGGATTGTTGTTGCATATTGAGC 76929308
Score = 134 bits (148), Expect = 4e-27
Identities = 127/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 19546 AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAAT 19605
|| || |||||||| ||| | ||||| || || || ||||| ||| | |||| | |
Sbjct 71012680 AGTACTATGGCATTTAACCTAAATGGATTCAATTTCAACCAATCCGTAGTTGATAGTCAA 71012621
Query 19606 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTA 19665
||||| || ||| ||||||||||||| || |||| |||||||| || || | || |||
Sbjct 71012620 GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 71012561
Query 19666 ATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707
||||||||||||||||||||||||||||| || ||| | |||
Sbjct 71012560 ATGCACGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCT 71012519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141114625140762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |