Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq2 104 2e-17 seq1 102 7e-17 seq5 100 2e-16 seq7 96.9 3e-15 seq4 95.1 1e-14 seq3 87.8 2e-12 >seq6 Length=240577051 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| || | ||| | ||||| || ||||| ||| || || || || || ||||| Sbjct 108487418 CCTCCCCTGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCT 108487359 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||| || || || || ||||||||||| | || Sbjct 108487358 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 108487299 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236 | || ||| |||||| ||| || || | ||| | | | || || |||||||| Sbjct 108487298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCAC 108487240 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 |||| |||||| | || |||||||| || || || ||||| |||||||| Sbjct 108487239 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 108487189 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || | || |||||||| Sbjct 194679010 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGC 194678951 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| ||||| ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 194678950 TTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 194678891 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | ||| | | | || || ||||| || || | |||||| | || ||||| Sbjct 194678890 GCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCAAGCGTGATGGTCTTGCCCGT 194678832 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||||||||| Sbjct 194678831 GAGGGTCTTGACGAAGATTTGCAT 194678808 >seq2 Length=243061704 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||| ||| || || || || || || || || || || ||||| || Sbjct 44701942 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCTGCCAGCGTGCGCTCGTCCTCC 44702001 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || || || ||||||||||| | || | | ||| |||||| Sbjct 44702002 AGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGC 44702061 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 | || || | |||||||||| || || |||||| |||| |||||| | || Sbjct 44702062 ACCTTGGCCTTCACGTTCGCCACCGTGTCCGACGCCTCCACCTCCAGCGTGATCGTCTTG 44702121 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||||||||| || || ||||| |||||||| Sbjct 44702122 CCCGTCAGCGTCTTCACGAAGATCTGCATCTT 44702153 Score = 102 bits (112), Expect = 7e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || || || | ||| | ||||| || || |||||||| || || || |||||||| ||| Sbjct 233057250 CCACCCCTCAGGCGGAGCACCAGGTGCAGGGTGCTCTCCTTCTGAATGTTATAATCAGCA 233057191 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || |||||||||||||| | ||| Sbjct 233057190 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 233057131 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234 | || ||| |||||| ||| || |||| | | | || || ||| ||| Sbjct 233057130 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCT---CTCA 233057074 Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || |||| ||||| | || || |||| || || || ||||| |||||| Sbjct 233057073 ACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATC 233057023 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/214 (69%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||| || || ||||| ||||| || || || || | || || Sbjct 233057461 CACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTGCGGCCATCCTC 233057402 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || ||||| || ||||||||||| |||| ||| | || ||| |||||| Sbjct 233057401 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTG 233057342 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251 ||| || |||| | | | || || ||| ||| || |||| ||||| | Sbjct 233057341 GATCTTGGCCTTGACATTGTCGATTGTGTCAGAGCT---CTCAACCTCCAGAGTGATGGT 233057285 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || |||| || || |||||||| |||||| Sbjct 233057284 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 233057251 >seq1 Length=275477322 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||||| || || || | Sbjct 247621445 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 247621504 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 247621505 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 247621564 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || || | ||| | | | || || |||||||| |||| ||||| Sbjct 247621565 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGA 247621623 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 247621624 TGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 247621663 >seq5 Length=158699395 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || |||||||| || || | Sbjct 81635729 GCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGACC 81635670 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| || || || |||||||||||||| | ||| | || ||| || Sbjct 81635669 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 81635610 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || | | | | || || ||||| || |||| ||||| Sbjct 81635609 GTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAGGACTCAACCTCCAAGGTGAT 81635550 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || || || || || ||||||||||| ||||||| Sbjct 81635549 GGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCATCT 81635512 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || ||||| || |||||||| || |||| || ||||| Sbjct 71677413 TGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCAAGTGTACGCCCGTCCTCGAGCTGC 71677472 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||| | || | | ||| |||||| ||| ||| Sbjct 71677473 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTC 71677532 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | ||||| || || || || | ||||| | || || || Sbjct 71677533 GCCTTGACATTGTCAATTGTATCCGAGGATTCAACCTCGAGGGTGATGGTCTTGCCTGTG 71677592 Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286 || || || |||||||| ||||||| Sbjct 71677593 AGTGTCTTCACAAAGATCTGCATCT 71677617 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/222 (70%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 39066 TAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124 ||||| | | ||||| || || || ||| ||||| ||||| || |||||||| || | Sbjct 74943779 TAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCAAGGGTGC 74943720 Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184 | | || |||||||| ||||| || || || |||||||||||||| | ||| | || || Sbjct 74943719 GACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCT 74943660 Query 39185 CTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCG 39244 | |||||| ||| || || | | | | || || ||||| || || | | Sbjct 74943659 CCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCGACCTCAAGTG 74943600 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||| | || || || || || || |||||||| ||||||| Sbjct 74943599 TGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT 74943558 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || ||||| || |||||||| || | || || ||||| Sbjct 71682246 TGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCAAGTGTACGCCCATCCTCGAGCTGC 71682305 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||| | || | | ||| |||||| ||| ||| Sbjct 71682306 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTC 71682365 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | ||||| || || || || | ||||| | || || || Sbjct 71682366 GCCTTGACATTGTCAATTGTATCTGAGGATTCAACCTCAAGGGTGATGGTCTTGCCTGTG 71682425 Query 39262 AGCGTTTTAACAAAGATTTGCATCTTTA 39289 || || || |||||||| ||||||| || Sbjct 71682426 AGAGTCTTCACAAAGATCTGCATCTGTA 71682453 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/220 (70%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 39066 TAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124 ||||| | | ||||| || || || ||| ||||| ||||| || |||||||| || | Sbjct 74944007 TAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCAAGGGTGC 74943948 Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184 | | || |||||||| ||||| || || || |||||||||||||| | ||| | || || Sbjct 74943947 GACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCT 74943888 Query 39185 CTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCG 39244 | |||||| ||| || || | | | | || || ||||| || || | | Sbjct 74943887 CCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCAACCTCAAGTG 74943828 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| | || || || || || || |||||||| ||||| Sbjct 74943827 TGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 74943788 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || ||||| || ||||| || || | || || Sbjct 71676722 CACCAAGTGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTC 71676781 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || || || || || || ||||||||||| |||||| | || || |||||| Sbjct 71676782 CAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG-ATGCCTTCCTTGTCC- 71676839 Query 39194 TGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| | | || ||| | | | | || ||| ||||| || || | ||||| | Sbjct 71676840 TGAATCTTTGCTTTCACATTATCAATTGTGTCGGAAGACTCAACTTCAAGTGTGATGGTC 71676899 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||||||| || || || ||||||||||| Sbjct 71676900 TTTCCCGTCAGAGTCTTCACGAAGATTTGCAT 71676931 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || ||||| || || | || |||||||| ||||| || || Sbjct 74944207 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 74944148 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| || || | ||| Sbjct 74944147 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 74944089 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||| || ||||| || || | |||||| | || || || || || || | Sbjct 74944088 TGTCGATCGTGTCAGAGGACTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTCTTCA 74944029 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 74944028 CAAAGATCTGCAT 74944016 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| || || || || || || || || || || || | Sbjct 74944459 GCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGCCAGGGTGCGGCC 74944400 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| ||||| || |||||||||||||| | ||| | || ||| || Sbjct 74944399 ATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 74944340 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || | | | | || || ||||||||| |||| ||||| Sbjct 74944339 GTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGACGACTCCACCTCCAAAGTGAT 74944280 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || |||||||| ||||| Sbjct 74944279 GGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 74944244 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | |||||| || || ||| ||| || || || || || || || || || || | Sbjct 81635957 GCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCC 81635898 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| ||||| || || ||||||||||| | ||| | || ||| || Sbjct 81635897 ATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTT 81635838 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| || | ||| | | | || ||| |||||||| || | || | Sbjct 81635837 GTCCTGGATCTTCGCCTTCA-CGTTGTCAATGGTGTCGGAGGACTCCACCTCGAGGGTAA 81635779 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || || || || || || ||||| ||||| Sbjct 81635778 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 81635742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || ||||| || ||||| || || | || || Sbjct 71681555 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTC 71681614 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| || || || || || || ||||||||||| |||||| | || ||||||| | Sbjct 71681615 CAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG-ATGCCTTCTTTGT-CT 71681672 Query 39194 TGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| | | || ||| | | | | || || ||||| || || | ||||| | Sbjct 71681673 TGAATCTTTGCTTTCACATTATCAATTGTGTCAGAAGACTCAACTTCAAGTGTGATGGTC 71681732 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| ||||| || || || ||||||||||| Sbjct 71681733 TTTCCAGTCAGAGTCTTCACGAAGATTTGCAT 71681764 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | || | ||||| ||| |||||| || || || || || Sbjct 71677157 CATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTC 71677216 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGG 39172 || | || || | || |||||||| || || ||||| || | |||||||||| ||| Sbjct 71677217 AGCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGG 71677276 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGAC 39231 ||| | || || |||||| ||| | | || ||||| | | | ||| || ||| Sbjct 71677277 AGGGATCCCT-TCCTTGTCC-TGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGAC 71677334 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | |||||| | || || || || || || |||||||| ||||| Sbjct 71677335 TCAACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71677387 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | ||| | || | ||||| ||| |||||| || || || || || Sbjct 71681990 CATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTC 71682049 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGG 39172 || | || || | || |||||||| || || ||||| || | |||||||||| ||| Sbjct 71682050 AGCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGG 71682109 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGAC 39231 ||| | || || |||||| ||| | | || ||||| | | | ||| || ||| Sbjct 71682110 AGGGATCCCT-TCCTTGTCC-TGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGAC 71682167 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | |||||| | || || || || || || |||||||| ||||| Sbjct 71682168 TCAACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71682220 >seq7 Length=154015841 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || ||||| ||| || || || || || ||||| || || || | Sbjct 37434932 GCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 37434991 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 37434992 GTCCTCTAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTT 37435051 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||| || || |||| ||| | | || ||||| |||||| || | ||||| Sbjct 37435052 ATCCTGAATCTTGACCTTGA-CGTTGTTAATGGTGTCGCTGCTCTCCACCTCGAGCGTGA 37435110 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||||||||| || |||||||| ||||| Sbjct 37435111 TCGTCTTCCCCGTCAGCGTCTTCACAAAGATCTGCAT 37435147 >seq4 Length=191835039 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || || ||||| ||||| || || | || |||||||| Sbjct 68254207 TGCAGGGTGGACTCCTTTTGAATGTTGTAATCTGCAAGCGTACGCCCATCCTCAAGCTGC 68254148 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| ||||| ||||||||||| | || | | || |||||| ||| || Sbjct 68254147 TTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTT 68254088 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | |||||| |||||||| || | ||||| | || || || Sbjct 68254087 GCCTTGACATTGTCAATCGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTG 68254028 Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286 || || || |||||||| ||||||| Sbjct 68254027 AGTGTCTTCACAAAGATCTGCATCT 68254003 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | || || | || | ||| || ||| |||||| || |||||||| || || Sbjct 68254459 CCTCCACGCAAACGGAGGACAAGATGGAGTGTGGACTCTTTCTGGATATTATAGTCAGCC 68254400 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||| ||||| || || ||||||||||| | ||| Sbjct 68254399 AGAGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 68254340 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| |||||| ||| || || | | | | || || ||||| || Sbjct 68254339 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACC 68254280 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || || || || || |||||||| ||||| Sbjct 68254279 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 68254233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || ||||| || || || || | || || ||||| ||||| ||||| Sbjct 68254879 TCCTTCTGAATGTTGTAATCTGCCAGGGTCCGCCCATCCTCCAGCTGCTTGCCGGCAAAG 68254820 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || ||||||||||| | ||| | || ||| |||||| || ||| || | | Sbjct 68254819 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTG 68254760 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | ||| || |||||||| |||| ||||| | || || || ||||| || ||| Sbjct 68254759 TCAATCGTGTCTGAAGACTCCACCTCCAAAGTGATGGTCTTGCCGGTGAGCGTCTTGACA 68254700 Query 39274 AAGATTTGCAT 39284 || || ||||| Sbjct 68254699 AAAATCTGCAT 68254689 >seq3 Length=300915289 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||||| | ||| ||||| || || || |||||| || ||||| ||||| || Sbjct 25197879 CCTCCTCGGAGGCGGGGGACCAAGTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCC 25197820 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 | ||| ||| |||| || |||| || || ||||| || || ||||||||||| | || Sbjct 25197819 AATGTGCGTCCGTCCTCCGGCTGCTTTCCAGCAAAGATGAGTCGCTGCTGGTCTGGCGGG 25197760 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234 | || |||||||||| ||| || |||| | | | || || ||| ||| Sbjct 25197759 ATGCCCTCTTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCT---CTCA 25197703 Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| |||||| | || | || || || || |||||||| ||||| Sbjct 25197702 ACTTCCAGAGTGATAGTCTTCCTAGTAAGTGTCTTCACAAAGATATGCAT 25197653 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || ||||| || || | || |||||||| Sbjct 296745221 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCCTCCTCAAGCTGC 296745162 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || ||| ||||| ||| || Sbjct 296745161 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTA 296745102 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | ||| || ||||| || |||| ||||| | || || ||| Sbjct 296745101 GCCTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTC 296745042 Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286 | || || |||||||||||||||| Sbjct 296745041 AAGGTCTTCACAAAGATTTGCATCT 296745017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429438861811157