Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07]
20,389 sequences; 1,794,547,441 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
seq2 104 2e-17
seq1 102 7e-17
seq5 100 2e-16
seq7 96.9 3e-15
seq4 95.1 1e-14
seq3 87.8 2e-12
>seq6
Length=240577051
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
||||| || | ||| | ||||| || ||||| ||| || || || || || |||||
Sbjct 108487418 CCTCCCCTGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCT 108487359
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || | || || ||||| ||||| || || || || ||||||||||| | ||
Sbjct 108487358 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 108487299
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236
| || ||| |||||| ||| || || | ||| | | | || || ||||||||
Sbjct 108487298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCAC 108487240
Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|||| |||||| | || |||||||| || || || ||||| ||||||||
Sbjct 108487239 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 108487189
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || || || || || || || || || | || ||||||||
Sbjct 194679010 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGC 194678951
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| ||||| ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 194678950 TTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 194678891
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|| | ||| | | | || || ||||| || || | |||||| | || |||||
Sbjct 194678890 GCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCAAGCGTGATGGTCTTGCCCGT 194678832
Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || |||||||||||
Sbjct 194678831 GAGGGTCTTGACGAAGATTTGCAT 194678808
>seq2
Length=243061704
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || ||||| ||| || || || || || || || || || || ||||| ||
Sbjct 44701942 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCTGCCAGCGTGCGCTCGTCCTCC 44702001
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || || || || || ||||||||||| | || | | ||| ||||||
Sbjct 44702002 AGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGC 44702061
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
| || || | |||||||||| || || |||||| |||| |||||| | ||
Sbjct 44702062 ACCTTGGCCTTCACGTTCGCCACCGTGTCCGACGCCTCCACCTCCAGCGTGATCGTCTTG 44702121
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
||||||||||| || || ||||| ||||||||
Sbjct 44702122 CCCGTCAGCGTCTTCACGAAGATCTGCATCTT 44702153
Score = 102 bits (112), Expect = 7e-17
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
|| || || | ||| | ||||| || || |||||||| || || || |||||||| |||
Sbjct 233057250 CCACCCCTCAGGCGGAGCACCAGGTGCAGGGTGCTCTCCTTCTGAATGTTATAATCAGCA 233057191
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || |||| || ||||| ||||| || || || |||||||||||||| | |||
Sbjct 233057190 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 233057131
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234
| || ||| |||||| ||| || |||| | | | || || ||| |||
Sbjct 233057130 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCT---CTCA 233057074
Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285
|| |||| ||||| | || || |||| || || || ||||| ||||||
Sbjct 233057073 ACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATC 233057023
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/214 (69%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || || ||| ||| || || ||||| ||||| || || || || | || ||
Sbjct 233057461 CACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTGCGGCCATCCTC 233057402
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| || || ||||| || ||||||||||| |||| ||| | || ||| ||||||
Sbjct 233057401 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTG 233057342
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251
||| || |||| | | | || || ||| ||| || |||| ||||| |
Sbjct 233057341 GATCTTGGCCTTGACATTGTCGATTGTGTCAGAGCT---CTCAACCTCCAGAGTGATGGT 233057285
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285
|| || |||| || || |||||||| ||||||
Sbjct 233057284 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 233057251
>seq1
Length=275477322
Score = 102 bits (112), Expect = 7e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || || ||| ||| || || || || || ||||| || || || |
Sbjct 247621445 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 247621504
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
||| || ||||| ||||| || || || || ||||||||||| | || | || ||| ||
Sbjct 247621505 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 247621564
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| || || | ||| | | | || || |||||||| |||| |||||
Sbjct 247621565 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGA 247621623
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
| | || |||||||| || || || ||||| ||||||||
Sbjct 247621624 TGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 247621663
>seq5
Length=158699395
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || || ||| ||| || || || || || |||||||| || || |
Sbjct 81635729 GCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGACC 81635670
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| |||||||| ||||| || || || |||||||||||||| | ||| | || ||| ||
Sbjct 81635669 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 81635610
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| ||| || || | | | | || || ||||| || |||| |||||
Sbjct 81635609 GTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAGGACTCAACCTCCAAGGTGAT 81635550
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| || || || || || ||||||||||| |||||||
Sbjct 81635549 GGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCATCT 81635512
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| ||||| || ||||| || |||||||| || |||| || |||||
Sbjct 71677413 TGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCAAGTGTACGCCCGTCCTCGAGCTGC 71677472
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| || || ||||||||||| | || | | ||| |||||| ||| |||
Sbjct 71677473 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTC 71677532
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|||| | | | ||||| || || || || | ||||| | || || ||
Sbjct 71677533 GCCTTGACATTGTCAATTGTATCCGAGGATTCAACCTCGAGGGTGATGGTCTTGCCTGTG 71677592
Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286
|| || || |||||||| |||||||
Sbjct 71677593 AGTGTCTTCACAAAGATCTGCATCT 71677617
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/222 (70%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 39066 TAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124
||||| | | ||||| || || || ||| ||||| ||||| || |||||||| || |
Sbjct 74943779 TAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCAAGGGTGC 74943720
Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184
| | || |||||||| ||||| || || || |||||||||||||| | ||| | || ||
Sbjct 74943719 GACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCT 74943660
Query 39185 CTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCG 39244
| |||||| ||| || || | | | | || || ||||| || || | |
Sbjct 74943659 CCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCGACCTCAAGTG 74943600
Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|||| | || || || || || || |||||||| |||||||
Sbjct 74943599 TGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT 74943558
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| ||||| || ||||| || |||||||| || | || || |||||
Sbjct 71682246 TGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCAAGTGTACGCCCATCCTCGAGCTGC 71682305
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| || || ||||||||||| | || | | ||| |||||| ||| |||
Sbjct 71682306 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTC 71682365
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|||| | | | ||||| || || || || | ||||| | || || ||
Sbjct 71682366 GCCTTGACATTGTCAATTGTATCTGAGGATTCAACCTCAAGGGTGATGGTCTTGCCTGTG 71682425
Query 39262 AGCGTTTTAACAAAGATTTGCATCTTTA 39289
|| || || |||||||| ||||||| ||
Sbjct 71682426 AGAGTCTTCACAAAGATCTGCATCTGTA 71682453
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/220 (70%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 39066 TAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124
||||| | | ||||| || || || ||| ||||| ||||| || |||||||| || |
Sbjct 74944007 TAAGCCTCAGCACCAGGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCAAGGGTGC 74943948
Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184
| | || |||||||| ||||| || || || |||||||||||||| | ||| | || ||
Sbjct 74943947 GACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCT 74943888
Query 39185 CTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCG 39244
| |||||| ||| || || | | | | || || ||||| || || | |
Sbjct 74943887 CCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGAGGACTCAACCTCAAGTG 74943828
Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| | || || || || || || |||||||| |||||
Sbjct 74943827 TGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 74943788
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || || ||| || || || ||||| || ||||| || || | || ||
Sbjct 71676722 CACCAAGTGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTC 71676781
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
||||| || || || || || || ||||||||||| |||||| | || || ||||||
Sbjct 71676782 CAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG-ATGCCTTCCTTGTCC- 71676839
Query 39194 TGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252
||| | | || ||| | | | | || ||| ||||| || || | ||||| |
Sbjct 71676840 TGAATCTTTGCTTTCACATTATCAATTGTGTCGGAAGACTCAACTTCAAGTGTGATGGTC 71676899
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||||||||| || || || |||||||||||
Sbjct 71676900 TTTCCCGTCAGAGTCTTCACGAAGATTTGCAT 71676931
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || || || ||||| || || | || |||||||| ||||| || ||
Sbjct 74944207 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 74944148
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| |||||||||||||| | ||| | || ||| |||||| ||| || || | |||
Sbjct 74944147 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 74944089
Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| | | ||| || ||||| || || | |||||| | || || || || || || |
Sbjct 74944088 TGTCGATCGTGTCAGAGGACTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTCTTCA 74944029
Query 39272 CAAAGATTTGCAT 39284
||||||| |||||
Sbjct 74944028 CAAAGATCTGCAT 74944016
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || || ||| || || || || || || || || || || || |
Sbjct 74944459 GCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGCCAGGGTGCGGCC 74944400
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| ||||| || |||||||||||||| | ||| | || ||| ||
Sbjct 74944399 ATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 74944340
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| ||| || || | | | | || || ||||||||| |||| |||||
Sbjct 74944339 GTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCAGACGACTCCACCTCCAAAGTGAT 74944280
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || || |||||||| |||||
Sbjct 74944279 GGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 74944244
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | |||||| || || ||| ||| || || || || || || || || || || |
Sbjct 81635957 GCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCC 81635898
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| ||||| || || ||||||||||| | ||| | || ||| ||
Sbjct 81635897 ATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTT 81635838
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| ||| || | ||| | | | || ||| |||||||| || | || |
Sbjct 81635837 GTCCTGGATCTTCGCCTTCA-CGTTGTCAATGGTGTCGGAGGACTCCACCTCGAGGGTAA 81635779
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| | || || || || || || || ||||| |||||
Sbjct 81635778 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 81635742
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || ||||| || ||||| || || | || ||
Sbjct 71681555 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCGGCCATCCTC 71681614
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
||||| || || || || || || ||||||||||| |||||| | || ||||||| |
Sbjct 71681615 CAGCTGCTTTCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG-ATGCCTTCTTTGT-CT 71681672
Query 39194 TGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252
||| | | || ||| | | | | || || ||||| || || | ||||| |
Sbjct 71681673 TGAATCTTTGCTTTCACATTATCAATTGTGTCAGAAGACTCAACTTCAAGTGTGATGGTC 71681732
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| ||||| || || || |||||||||||
Sbjct 71681733 TTTCCAGTCAGAGTCTTCACGAAGATTTGCAT 71681764
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| || | ||| | || | ||||| ||| |||||| || || || || ||
Sbjct 71677157 CATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTC 71677216
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGG 39172
|| | || || | || |||||||| || || ||||| || | |||||||||| |||
Sbjct 71677217 AGCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGG 71677276
Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGAC 39231
||| | || || |||||| ||| | | || ||||| | | | ||| || |||
Sbjct 71677277 AGGGATCCCT-TCCTTGTCC-TGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGAC 71677334
Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || | |||||| | || || || || || || |||||||| |||||
Sbjct 71677335 TCAACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71677387
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| || | ||| | || | ||||| ||| |||||| || || || || ||
Sbjct 71681990 CATGCCTCCCCTGAGGCGAAGGACAAGGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTC 71682049
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGG 39172
|| | || || | || |||||||| || || ||||| || | |||||||||| |||
Sbjct 71682050 AGCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAACCGCTGCTGGTCCGG 71682109
Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGAC 39231
||| | || || |||||| ||| | | || ||||| | | | ||| || |||
Sbjct 71682110 AGGGATCCCT-TCCTTGTCC-TGAATCTTTGCTTTGACATTGTCAATCGTGTCAGAGGAC 71682167
Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || | |||||| | || || || || || || |||||||| |||||
Sbjct 71682168 TCAACTTCAAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 71682220
>seq7
Length=154015841
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || ||||| ||| || || || || || ||||| || || || |
Sbjct 37434932 GCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 37434991
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
||| || ||||| ||||| || || || || ||||||||||| | || | || ||| ||
Sbjct 37434992 GTCCTCTAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTT 37435051
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
||| || || |||| ||| | | || ||||| |||||| || | |||||
Sbjct 37435052 ATCCTGAATCTTGACCTTGA-CGTTGTTAATGGTGTCGCTGCTCTCCACCTCGAGCGTGA 37435110
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| | || ||||||||||| || |||||||| |||||
Sbjct 37435111 TCGTCTTCCCCGTCAGCGTCTTCACAAAGATCTGCAT 37435147
>seq4
Length=191835039
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| ||||| || || ||||| ||||| || || | || ||||||||
Sbjct 68254207 TGCAGGGTGGACTCCTTTTGAATGTTGTAATCTGCAAGCGTACGCCCATCCTCAAGCTGC 68254148
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
|| || ||||| ||||| ||||||||||| | || | | || |||||| ||| ||
Sbjct 68254147 TTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTT 68254088
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|||| | | | |||||| |||||||| || | ||||| | || || ||
Sbjct 68254087 GCCTTGACATTGTCAATCGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTG 68254028
Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286
|| || || |||||||| |||||||
Sbjct 68254027 AGTGTCTTCACAAAGATCTGCATCT 68254003
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
||||| | || || | || | ||| || ||| |||||| || |||||||| || ||
Sbjct 68254459 CCTCCACGCAAACGGAGGACAAGATGGAGTGTGGACTCTTTCTGGATATTATAGTCAGCC 68254400
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || | || || ||||| ||||| ||||| || || ||||||||||| | |||
Sbjct 68254399 AGAGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 68254340
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237
| || ||| |||||| ||| || || | | | | || || ||||| ||
Sbjct 68254339 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACC 68254280
Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| ||||| | || || || || || || |||||||| |||||
Sbjct 68254279 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 68254233
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || || || ||||| || || || || | || || ||||| ||||| |||||
Sbjct 68254879 TCCTTCTGAATGTTGTAATCTGCCAGGGTCCGCCCATCCTCCAGCTGCTTGCCGGCAAAG 68254820
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213
|| || ||||||||||| | ||| | || ||| |||||| || ||| || | |
Sbjct 68254819 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTG 68254760
Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273
| | ||| || |||||||| |||| ||||| | || || || ||||| || |||
Sbjct 68254759 TCAATCGTGTCTGAAGACTCCACCTCCAAAGTGATGGTCTTGCCGGTGAGCGTCTTGACA 68254700
Query 39274 AAGATTTGCAT 39284
|| || |||||
Sbjct 68254699 AAAATCTGCAT 68254689
>seq3
Length=300915289
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
||||||| | ||| ||||| || || || |||||| || ||||| ||||| ||
Sbjct 25197879 CCTCCTCGGAGGCGGGGGACCAAGTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCC 25197820
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
| ||| ||| |||| || |||| || || ||||| || || ||||||||||| | ||
Sbjct 25197819 AATGTGCGTCCGTCCTCCGGCTGCTTTCCAGCAAAGATGAGTCGCTGCTGGTCTGGCGGG 25197760
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234
| || |||||||||| ||| || |||| | | | || || ||| |||
Sbjct 25197759 ATGCCCTCTTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCT---CTCA 25197703
Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| |||||| | || | || || || || |||||||| |||||
Sbjct 25197702 ACTTCCAGAGTGATAGTCTTCCTAGTAAGTGTCTTCACAAAGATATGCAT 25197653
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || || || || || ||||| || || | || ||||||||
Sbjct 296745221 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCCTCCTCAAGCTGC 296745162
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | || | || ||| ||||| ||| ||
Sbjct 296745161 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTA 296745102
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|| | | | | ||| || ||||| || |||| ||||| | || || |||
Sbjct 296745101 GCCTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTC 296745042
Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286
| || || ||||||||||||||||
Sbjct 296745041 AAGGTCTTCACAAAGATTTGCATCT 296745017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429438861811157
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |