Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq40979 82.4 6e-11 >seq40979 Length=295773 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || ||||||||||| | |||| || || || ||||||||| |||||||| || | Sbjct 223694 ACTTGAGCAATCATATATGTTAGGAGTGAGTATGAAGCAATGTTGAATGGCACACCGAGA 223753 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 |||||||| || || | || |||| |||||| ||||| | |||||| |||||||| Sbjct 223754 CCCATATCTGCAGAACGCTGGTACATTTGACATGAAAGTTCTCCATCCTTCACATAAAAC 223813 Query 101876 TGA 101878 ||| Sbjct 223814 TGA 223816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360930230792402