Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26]
72,902 sequences; 1,008,684,112 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq41242 84.2 3e-11
>seq41242
Length=195047
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/108 (79%), Gaps = 2/108 (2%)
Strand=Plus/Plus
Query 146081 GTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139
|||||||| ||| || ||||| || |||| |||||| | || ||| || | ||||||||
Sbjct 146699 GTAGATTCCTTTTGA-ATATTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCC 146757
Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||| || | || |||||||| |||||||| || ||||| || ||
Sbjct 146758 AGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTG 146805
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/108 (79%), Gaps = 2/108 (2%)
Strand=Plus/Plus
Query 146081 GTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139
|||||||| ||| || ||||| || |||| |||||| | || ||| || | ||||||||
Sbjct 151863 GTAGATTCCTTTTGA-ATATTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCC 151921
Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||| || | || |||||||| |||||||| || ||||| || ||
Sbjct 151922 AGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTG 151969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742848842979840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |