Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq41242 84.2 3e-11 >seq41242 Length=195047 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 146081 GTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139 |||||||| ||| || ||||| || |||| |||||| | || ||| || | |||||||| Sbjct 146699 GTAGATTCCTTTTGA-ATATTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCC 146757 Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||| || | || |||||||| |||||||| || ||||| || || Sbjct 146758 AGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTG 146805 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 146081 GTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139 |||||||| ||| || ||||| || |||| |||||| | || ||| || | |||||||| Sbjct 151863 GTAGATTCCTTTTGA-ATATTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCC 151921 Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||| || | || |||||||| |||||||| || ||||| || || Sbjct 151922 AGCAAAGATAAGCCTCTGCTGATCTGGAGGAATGCCCTCTTTGTCCTG 151969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742848842979840