Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2987 104 5e-17 >seq2987 Length=13944 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || || |||| |||| ||| |||||||| |||| ||| || || | ||| || Sbjct 2208 GATTTTGACTATGATTATTTTGGTTTTAAAACGCTTGAGAGATCCTACCTTTTGAAAGTT 2149 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 ||| ||| | |||||| || |||||||||||||||| | || |||| ||||| ||| Sbjct 2148 TCTGGGAAGGTTGTGGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGGATCCAC 2089 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 || ||||| || ||| | | | || || | ||| | | || ||| | ||| Sbjct 2088 AAAGATGATATTGAGTCTGCAATAAAAACATATAATTTGATGTCTCAGCGATGGTTTACA 2029 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 |||||| | || || |||||||| || || || Sbjct 2028 CATGCCTCCCCTACCCTCTTCAATGCAGGCAC 1997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072763441111936