Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq41242 86.0 6e-12 >seq41242 Length=195047 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | ||| |||| Sbjct 171159 ATGCAAATATTTGTGAAGACGCTTACTGGAAAGACCATCACCTTAGAAGTAGAGAGCTCG 171100 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| || ||||| || || ||||| Sbjct 171099 GACACCATCGATAATGTCAAGGCAAAGATCCAGGACAAGGAGGGGATCCCGCCAGATCAG 171040 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || || ||||| || || |||| | | | | | || || || Sbjct 171039 CAGAGGCTAATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACCCTTGCAGATTACAAT 170980 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||| || ||||||| || || Sbjct 170979 ATTCAGAAGGAATCCACCCTCCATCTTGTACT 170948 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 171615 ATGCAGATATTTGTCAAGACCCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCG 171556 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 171555 GACACCATCGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGCATCCCCCCGGACCAG 171496 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||| | | ||||| || ||||| |||| | | | | ||||||||| Sbjct 171495 CAAAGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTATAAC 171436 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| || ||||||| || || | ||||| || || Sbjct 171435 ATTCAAAAGGAATCCACCCTCCATCTTGTGCTTCGTCTTAGGGGTGG 171389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478226206921440