Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq41242 82.4 7e-11 >seq41242 Length=195047 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | |||||||| | || ||| | || || ||| | Sbjct 171615 ATGCAGATATTTGTCAAGACCCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCG 171556 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| || ||||| || || || || Sbjct 171555 GACACCATCGACAATGTAAAGGCTAAGATACAGGACAAGGAGGGCATCCCCCCGGACCAG 171496 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| || | | |||||||| ||||| |||| | | | | | || |||||| Sbjct 171495 CAAAGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTATAAC 171436 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||||| ||||| || | ||| | ||| Sbjct 171435 ATTCAAAAGGAATCCACCCTCCATCTTGTG 171406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429554004819810