Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendrobium_20catenatum_20[refseq_20GCF_5F001605985.1_202016-02-26] 72,902 sequences; 1,008,684,112 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq25504 131 4e-25 >seq25504 Length=639989 Score = 131 bits (144), Expect = 4e-25 Identities = 302/455 (66%), Gaps = 0/455 (0%) Strand=Plus/Minus Query 243283 AAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGG 243342 || |||||||| ||||| || | || | | |||||||| || || | || ||||| Sbjct 367557 AATTCATTTGCAGAGCGCATCCTTGCGTTTGCTTGCGTTGAGGGAATCTTCTTCTCCGGT 367498 Query 243343 AGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT 243402 || ||||| |||||||| ||||| ||| | ||| | ||||| || ||| | || Sbjct 367497 AGCTTCTGTGCCATCTTCTGGCTCAAGAAGAGAGGGCTAATGCCCGGTCTCACCTTCTCC 367438 Query 243403 AACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCA 243462 |||||| |||| ||| |||||||| || ||| | || | | ||| | || Sbjct 367437 AACGAGCTCATATCTCGTGACGAGGGTCTGCACTGTGACTTTGCTTGCCTTCTCTACAGC 367378 Query 243463 AAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522 ||| | || ||||| | || | ||| | | || || | || || || || Sbjct 367377 CTCCTCAACAATAAGCTCTCTGAGGATAGGGTTCGAGAGATTATTTCCGATGCTGTCGAT 367318 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | || | ||| ||| | ||||| ||| | || || ||| | || ||||| |||| Sbjct 367317 ATAGAGAGGGAGTTCGTCTGCGATGCTCTCCCCTGTGCTCTTGTGGGGATGAATGCTGAT 367258 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 |||||| | |||||||| || || || ||||| || || | || || ||||| | | Sbjct 367257 CTCATGAGCCAGTACATAGAGTTTGTTGCCGATCGTCTTCTTGGTGCTCTGGGTTACGCG 367198 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || ||||| | ||||| |||| || |||||||| ||||| ||||| || ||| Sbjct 367197 AAGATGTACGAGGTATCAAACCCATTTGACTGGATGGAGCTTATTTCCCTTCAGGGAAAA 367138 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||||||| || || ||| | ||| | || || || Sbjct 367137 ACTAACTTTTTTGAGAAGAGGGTCGGGGAATACCA 367103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101849847353700